LOCUS       XM_342661               4265 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger CCCH-type containing,
            antiviral 1 like (Zc3hav1l), mRNA.
ACCESSION   XM_342661
VERSION     XM_342661.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_342661.8.
            
            On Jan 21, 2021 this sequence version replaced XM_342661.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4265
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4265
                     /gene="Zc3hav1l"
                     /note="zinc finger CCCH-type containing, antiviral 1 like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 136 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:362341"
                     /db_xref="RGD:1309236"
     CDS             1496..2521
                     /gene="Zc3hav1l"
                     /codon_start=1
                     /product="zinc finger CCCH-type antiviral protein 1-like"
                     /protein_id="XP_342662.5"
                     /db_xref="GeneID:362341"
                     /db_xref="RGD:1309236"
                     /translation="MLLGLRPCLLRPGPLPLAGSGRGRGGEEPAGPGLVGTRWRAMAD
                     LTLCAFLTKVLCAHGGRMFLQDLRGHVELSEAKLRAVLRRAGPERFLLQEVELRDGPW
                     DPEAEVAAGSGSGSGSGSGGGATACRVMAVSSARLCARYQRGECQACDQLHLCRRHML
                     GKCPHRDCWSTCSLSHDIHTPVNVQVLKNQGLFGLNEAQLRILLLQNDPCLFPEVCLL
                     YNKGGDVLYGYCNLKDKCNKFHVCRSFVRGECTFQTCKRSHQLIHAATLKLLEDQELS
                     VSSVVNFQIISTYRHKKLHKMLEEKDNSTSTEQSQGLGKQGTPGAGAVEARPFFPARA
                     QSPWKPQ"
ORIGIN      
        1 tcctagaact ggagttacag atagtgtctc aattatccat tgggtgggga tcatcaaacc
       61 cctgtcttcc ctaagagtca catgtgctct taattgctgg gataactctc catctcaact
      121 tttgagtcat acaaaattga tttttttttt ttaagttagg ctctcagagg ttggggattt
      181 agctcagtgg tagagcactt gcctagcaag cacaaggcct tgggttcggt ccccagctcc
      241 gaaaaaaaaa aaaagttagg gtctcatgta gaacaggata tccttaaact aggtatatag
      301 tggaggatgg ccttgaactc ctgacccagc ttcaaccaac ccagtgctgg gatcacaggc
      361 aagtccacca ggcccaatgt atgtgctgct tgggaatgga acccaaggct tcattaatgt
      421 taagctagca gtccacagag ctatatcccc agctcccaag ctgagttgtg ttttatctcc
      481 gttcagacgg aacacacttc aaaagtgatg gctagtggct ccctcttctg ggaggtcctc
      541 cgctcaacca gtctccttag caacttacca gcgttcaaaa aaaaaatttt tttttcccaa
      601 tgttatctat tattatgtgt gtgcttagtg tgcatcagca ttcatgtata atgtgtatta
      661 gtgcagatcc gtgcacgtgg aggtcagata caagtttcca gacctgattc tctctgccat
      721 gggctccaga gacctaactc atgttgaggt gtgccagccc ccagcatagc tgtagccatt
      781 ttcttccatg cctgcctgct atttcataat gtttctgtaa catgcctgcc actcactgac
      841 acaggaaaat accttgattc agaggaaggg catgttgatc gtatatcctg ttatgttctt
      901 gcatgtactg catgaggttt gctaatctta agaaatccta caacgcttta cataggagcc
      961 atcaaattaa aggtcaatat gaactattac gtgtaaaatg gcttgagtca gcgttgatca
     1021 ctggcagcac ttcccccatt tgggtaggag ctcactatgg tttttgtgtt tttgtggttt
     1081 tcctttataa gctgacagag aaaaatcaac aatgtcatgg ctcaatccca tctgagttac
     1141 ggttctgatt gatcagtatt acggtgtgtg ttcaatagga tttcagtcct atctggactg
     1201 aaatcggtgt ttgtgtggtt tgtaggggtt actcatggac cccaatactt atgaaggagc
     1261 ttataccccc tgagctggtt ccttactagt ttttttgaga cacagcgtca tgtagtccag
     1321 gctagcctcc aactcccttt gcagtggacg ctggccttga tctctgcctc ctctcgcctc
     1381 tatctccaag gtgcaacaac caccaggctg gacgaaccac tttagcagtt tgtattcttt
     1441 gcagcccttc ctgctatctg ctatccgcta tcttcaagaa acccaggaga caggaatgct
     1501 gctggggctc aggccctgcc ttctgaggcc cggcccccta ccgctcgcag gctccggccg
     1561 cggtcgcggc ggggaggagc ctgcaggccc ggggctggtg gggacgcgct ggcgggccat
     1621 ggcggacctc accctatgcg cgttcctcac caaggtgctg tgtgctcacg gcggccgcat
     1681 gtttctgcag gacctgcgtg gccacgtgga gctgtcggag gcgaagctgc gggccgtgct
     1741 gaggcgcgcg ggcccagagc gcttcctgct gcaggaggtg gagctgcgcg acggcccgtg
     1801 ggaccctgag gccgaggtgg cggcgggctc gggctcgggc tcgggctcgg gctcaggcgg
     1861 tggcgccacg gcctgcaggg tgatggccgt gtcctccgcg cgcctctgcg cccgctacca
     1921 gcgcggggag tgccaggcct gcgaccagct gcacttgtgt cgccgccaca tgctgggcaa
     1981 gtgcccccac cgcgactgct ggtctacctg ctctctgtcc catgatatcc acacacctgt
     2041 caacgtccaa gtcttgaaaa accagggcct ttttggcctc aatgaagccc agcttcgaat
     2101 cttgcttttg cagaacgacc cctgcctttt cccagaggtc tgtttactgt acaacaaagg
     2161 tggtgatgtc ctttatggct actgcaacct caaggataag tgcaacaagt ttcacgtatg
     2221 cagatccttt gtgcggggtg aatgcacttt tcagacctgc aaacgctccc accagctcat
     2281 tcacgctgcc accctgaagt tgctagagga ccaagaactt agtgtttcaa gtgtggtgaa
     2341 tttccagata atctctacct acagacacaa gaagttgcac aagatgcttg aagagaaaga
     2401 caactcgact tctactgagc aatcacaagg ccttgggaaa caaggaaccc ccggggctgg
     2461 ggctgtggag gccaggcctt tcttccctgc ccgtgctcaa tcgccctgga agccccagta
     2521 aaccttaacg aggaagcaag aagcagcttg tgcatcttgg aggatcagaa ggaagacttc
     2581 tgctgagatg gagtttttag ctggtctttc tttccctcac ttagtatcat tggcaactcg
     2641 gatacctacc tcacagatga ttggcagaaa cgaaaatata cttgcgactg acgttggacc
     2701 tggagttggc aaagagaggg taaaattctg agcacgcagt ccagggtgaa tcctgaagct
     2761 gtagcctctc tctgcagctc ctgaacgcct tcgaacctct ggatggagga caggtttctg
     2821 ctgccttctg ggtccagctg gtgttttcta gactccattt atacagctta cattacagac
     2881 atcacagttt gtgtgctctg tcattatttg ttacttgggt ttatacataa tccctttttg
     2941 cacagaatta ttaatatagt ttagtcacgt ttcttattct ggaatatttc atactctgac
     3001 aatgtttgac tatctcattt tgtgtctgtg cagtattggg tttaaaagcc agtttgtact
     3061 tttgcctggc ttgtaggtgc taaacaatac tgtcttctga tacacatttc tttaaccatc
     3121 tgtgtagata acctctgtcc ttgcttgcta ttgggtcttg cttgattttg tgaatttcct
     3181 gtgttgcatt ttgtggctca tgccctctgt gctgttgtca ataccgtgtt tgtaatattc
     3241 aagtttctgg gtccatcctc aaccagtatc ccagctaata gtctttgggc tctgcccaga
     3301 ggtttctacc tcaccccacc cctctcatct tctgtcgagc ctatcagagc tcagctgctc
     3361 tatctagagg gatgtgtaat tcgttccttc cagttgtatc tcccccgaat ggatggagac
     3421 aggccatcag gaatctatat atatcttacc cgtttcatgg tctcgcccta cttctccctc
     3481 cctcagcccc tccgtctcca ctcatcctga tgttttcagt gtgtgctttg gagacatttg
     3541 ttgtggtcat gttccccagt gtcactttgt aaaaaagatt tgtgtctctt accataacat
     3601 gacatttgag aagtagtagc aattcagtaa gttttcataa agccgaactt cccttatttg
     3661 gagaaacttt tatcatgatg cctagggatc gaaagagaag agggatgtaa aagtgtcctt
     3721 tccaaatgaa aaaccagttt cctggacagt aagcttgctg acttactgtt tttcacttcg
     3781 gtggtcggtg acagtatttc tgaaattgtg ttttacattc ttttcttcct ttttaaattt
     3841 ctagctgtga tctctctctc tctctctctc tctctctgtg tgtgtgtgtg tgtgtgtgtg
     3901 tgtgtgtgtg tgtgtgtgtg tgatcaaacc taggaccttg cccatgtgaa gcaaagtcct
     3961 ctacaacaag gtacatttaa gtcctggact ttaaaataaa tttttaggcc agtcactgtg
     4021 gtgtaggcct ttaatcccag caccacagag gcagaggcaa gcagatctca gtgtgttcat
     4081 ggctgcctaa tctacgtagt aagttccagg ctagtcagag ctgcatagtg agaccctgcc
     4141 tcaaaagaaa tggcatttaa ttattattac gatttatatg ctgtcatttt cctttatata
     4201 tgatgttact ggtctgtaat cattgttgca acattttatt aaagtctgta atatttcatt
     4261 ttaaa
//
