LOCUS       NM_001130695            5466 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger CCCH-type containing 7B (Zc3h7b),
            mRNA.
ACCESSION   NM_001130695 XM_001077292 XM_243630
VERSION     NM_001130695.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5466)
  AUTHORS   Treiber,T., Treiber,N., Plessmann,U., Harlander,S., Daiss,J.L.,
            Eichner,N., Lehmann,G., Schall,K., Urlaub,H. and Meister,G.
  TITLE     A Compendium of RNA-Binding Proteins that Regulate MicroRNA
            Biogenesis
  JOURNAL   Mol Cell 66 (2), 270-284 (2017)
   PUBMED   28431233
REFERENCE   2  (bases 1 to 5466)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 5466)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 5466)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473950.2.
            
            On or before Aug 1, 2008 this sequence version replaced
            XM_243630.4, XM_001077292.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..5466
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..5466
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /note="zinc finger CCCH-type containing 7B"
                     /db_xref="GeneID:315158"
                     /db_xref="RGD:1307064"
     exon            1..94
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     CDS             21..2990
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /note="Rotavirus X associated non-structural protein"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein 7B"
                     /protein_id="NP_001124167.1"
                     /db_xref="GeneID:315158"
                     /db_xref="RGD:1307064"
                     /translation="MLSLQTLMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQ
                     NLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLYVNRAACYFTM
                     GLYEKALEDSEKALGLDGESIRALFRKARALNELGRHKEAYECSSRCSLALPHDENVT
                     QLGQELAQKLGLRVRKAYKRPQELETFSLLSNGAPAGLTDQGTSNGLGSIDDIETDCY
                     VDLRGSPALLPSTPTMPLFPHVLDLLAPLDGSSRPLPSTEGLDDFSDGDVFGPELDTL
                     LDSLSLVQGGLPGSGMPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMD
                     PSRKLAASVLDALDSPGPTLDPLDLLPYSEARLDALDSFGSARGSLDKPDSFLEEASS
                     QDHRPPSSTQKPAPSPEPSMPNTALLIKNPLAATHEFKQACQLCYPKTGPRAGDYTYR
                     EGLEHKCRRDVLLGRLRSSENQIWKRIRPRPTKTSFVGSYYLCKDMINKQDCKYGDNC
                     TFAYHQEEIDVWTEERKGTLNRDLLFDPLGGVKRGSLTIAKLLKEHQGIFTFLCEICF
                     DSKPRIISKGTKDSPSVCSNLAAKHSFYNNKCLVHIVRSTSLKYSKIRQFQEHFQFDV
                     CRHEVRYGCLREDSCHFAHSFIELKVWLLQQYSGMTHEDIVQESKKYWQQMEAHAGKA
                     SSGLGTPRTHGPSSFDLQMKFVCGQCWRNGQVVEPDKDLKYCSAKARHCWTKERRVLL
                     VMSKAKRKWVSVRPLPSIRNFPQQYDLCIHAQNGRKCQYVGNCSFAHSPEERDMWTFM
                     KENKILDMQQTYDMWLKKHNPGKPGEGTPISSREGEKQIQMPTDYADIMMGYHCWLCG
                     KNSNSKKQWQQHIQSEKHKEKVFTSDSDASGWAYRFPMGEFRLCDRLQKGKVCPDGDK
                     CRCAHGQEELNEWLDRREVLKQKLAKARKDMLLCPRDDDFGKYNFLLQEDGDTTGATP
                     EATVAATATAATTTTGE"
     exon            95..128
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            129..326
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            327..485
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            486..566
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            567..623
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            624..666
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            667..860
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            861..1182
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1183..1241
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1242..1341
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1342..1503
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1504..1709
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1710..1810
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1811..1992
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            1993..2078
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            2079..2212
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            2213..2318
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            2319..2427
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            2428..2561
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            2562..2725
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
     exon            2726..5466
                     /gene="Zc3h7b"
                     /gene_synonym="RGD1307064"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgtctgat tgatggattt atgctctccc tgcagacact gatggagagg cagaaacgga
       61 aggcggacat cgagaagggg ctgcagttca ttcagtcgac actaccccta aagcaagagg
      121 agtatgaggc tttcctgctc aagcttgtgc agaacctgtt tgccgagggc aacgacctct
      181 tccgggagaa ggactacaag caggctctgg tgcagtacat ggaagggctg aacgtggctg
      241 actacgccgc ctcggaccag gtggctctac cccgggagct gctgtgcaag ctgtatgtca
      301 acagggctgc ctgctacttc accatgggcc tgtatgagaa ggcgctggag gacagtgaga
      361 aggccttggg cctggatggc gagagtatcc gggcactgtt ccgcaaggcg cgcgccctca
      421 acgagctggg gcgccacaag gaggcctatg aatgcagcag ccggtgctcc ctggctctcc
      481 cccacgatga aaacgtcact cagctgggtc aggagctggc tcagaagctc gggctgcggg
      541 tgcggaaggc gtataagaga ccccaggaat tggaaacgtt ttctctgctt agtaatggcg
      601 ccccggctgg cttaacagat cagggaactt ctaacggatt gggatcgata gatgacatag
      661 aaacagactg ctacgtggat ctccgaggct ccccagccct gctcccctcc actcccacca
      721 tgcccctgtt ccctcatgtt ctggacctac tggcccccct ggatggcagc agcaggccac
      781 tccccagcac tgagggccta gatgacttct cagatgggga cgtgtttggt ccagaactgg
      841 acaccctcct ggactctctg tctctggtcc agggtggcct gcctggcagt ggtatgccta
      901 gtgagctgcc tcagctgatc cccgtgtttc ctggtgggac cccactcttg ccacctgtgg
      961 tgggtggctc catccccgtg tccagccctc tgcctcctgc ctcctttggc cttgtcatgg
     1021 acccctccag gaagctggct gcttctgtgc tggatgccct ggactctcca gggcccacgc
     1081 tggaccccct ggatctgtta ccgtactcgg aggctcggct ggatgccctt gacagctttg
     1141 ggtcagcccg aggctccctg gacaagccgg actccttcct agaagaggcc agctcacagg
     1201 accaccgacc cccaagcagt actcagaagc cagctccctc gccagagccc tccatgccca
     1261 acaccgccct gctcatcaag aaccctttgg ctgccaccca tgaattcaag caagcctgcc
     1321 agctgtgcta cccaaaaaca ggccccaggg ctggtgacta tacctaccgc gagggcctcg
     1381 agcacaagtg caggagggat gtcctcctcg gccggctccg gagctcagag aaccagatct
     1441 ggaagcgcat ccggccccgg cccaccaaga ccagttttgt gggctcctac tacctgtgca
     1501 aagacatgat taacaagcaa gactgtaagt acggggacaa ctgcaccttc gcctaccatc
     1561 aggaggagat cgatgtgtgg acagaggagc ggaagggcac cctcaaccgg gacctgctct
     1621 ttgaccctct agggggtgtc aagcgtggca gcctcaccat tgccaagctc ctcaaggagc
     1681 accagggcat cttcaccttc ctctgtgaga tctgcttcga cagtaagccc cggatcatca
     1741 gcaaaggcac caaggactct ccgtctgtct gttccaacct ggctgccaag cacagctttt
     1801 acaacaacaa gtgcctggtg cacatcgtcc gctccacctc tctcaagtac tccaagatcc
     1861 ggcagttcca ggagcacttc cagtttgacg tgtgccgcca cgaggtgcgc tatggttgcc
     1921 tgcgcgagga cagctgccac ttcgcccata gtttcattga actcaaggtc tggttgctgc
     1981 agcagtactc aggaatgacc cacgaggaca tcgttcagga atccaagaaa tactggcagc
     2041 agatggaggc ccatgcaggg aaggccagca gtggcttggg taccccaagg acacatggac
     2101 ccagctcctt tgacttgcag atgaagtttg tgtgtggtca gtgttggagg aatgggcagg
     2161 tggtggagcc cgataaggac ctcaagtact gcagcgccaa ggcccggcat tgctggacca
     2221 aggagaggcg ggtccttctg gtgatgtcca aggccaagag gaaatgggtg tctgtgaggc
     2281 cactgccatc cattcgaaac ttcccacagc aatacgatct ctgcatccat gcccagaacg
     2341 gccgcaaatg ccagtacgtg gggaactgct ccttcgcaca cagccctgag gagagggaca
     2401 tgtggacctt catgaaggag aacaagatcc tggatatgca acagacctat gacatgtggc
     2461 tgaaaaaaca caacccaggg aagccaggag aagggacccc catcagctcc cgggaaggag
     2521 agaagcagat ccagatgccc acggactatg ctgacatcat gatgggctac cactgctggc
     2581 tctgcggcaa gaacagcaac agcaagaagc agtggcagca gcacatccag tctgagaagc
     2641 acaaggagaa ggtcttcact tccgacagcg acgccagtgg ctgggcctac cgattcccca
     2701 tgggcgagtt ccgactctgt gacaggctgc agaagggcaa ggtgtgccca gacggagaca
     2761 agtgccgctg tgcccatgga caagaggagc tcaacgagtg gctggaccgg cgtgaggtgc
     2821 tgaagcaaaa gcttgccaag gcccgcaagg acatgcttct gtgtccacgg gatgatgact
     2881 tcggcaaata caacttcctg ctgcaagagg atggggacac cactggtgcc accccagaag
     2941 ccaccgttgc tgcaactgct actgctgcca ccaccaccac tggggagtag ggccaggtct
     3001 cagctatggc aaagtcctgg ggtcgggggt gggttggggg caggggacca ccccatcagg
     3061 cagcccccag tccgctgggt ccctgtcatc ctttccaccc ccaatacccc aggtgtgtat
     3121 acccaggtca tatactgcaa ccccaagtgg tcccaggatc tttgtcctgt caaaatggag
     3181 gcggaccctc cccaattcta gttctcgtgg ttggagaggg aggggcctgg ccagcttcag
     3241 cctacagctt taaatcgtgt ctgctcctaa atgggtccaa agctcagggc tggggagtct
     3301 ggggtcccca cttgaatata tgcagcagga ggatcctttt ccttctctac cttcctctct
     3361 cccttccctg gggtctgatc aggatgcagc aaagggcagg aggctctgac tagcctaaag
     3421 tacagtcgtg agatggagtt gggaacactg tgctggtcac ttaccacctg gggtttcctg
     3481 atctgcagaa aggggcaagg gctaaggcag atgatatctg aggcctggct aagcagtcta
     3541 ggtgctccta gcaaccatcc ctctgcccag ccctctcctt tgtgagccgc aaatgtagac
     3601 cgtactcagc cttggagtca acacaaccca cacccatttt acagaaacaa aaactgaggt
     3661 ctagcaggag gaatggtttg cccagggtct ttagccctct ctggtgcaga actgggatat
     3721 aaacattggt caaaagaccc cacccattcg cagctggagc cgctgggctc cccagtccca
     3781 tgcaacatcc ctgggacctt gggaaggctg ctgagacaag agctgttctt cttagctcca
     3841 tgttatgggt tttggggtaa gcgatggagg ttatatcccc aagagctttc acagacaagt
     3901 gacagaatac aggacaccat gagctagctc aggttctggc aaggtacaaa gcatggcgaa
     3961 gctctgagga atatgaagag tgagggagca acctaggctc tctgggcttt cctggggacc
     4021 ctctgtagtc ttctccaaaa gaccaagata tactgttatg accatccatc ccagtcccac
     4081 cctatgccca accctgctgg ccacctagga ccccagatga cccccagccc atgcccccac
     4141 ttaccaaggc ctcttttatc gtctgaggta tgtgtacacc ttttcatccc gccccccaca
     4201 atagacacag cctctcccgg ctctccaaga cattccagaa tgctccaccc cattggcaca
     4261 agaaggggga acaccccgtc cccagaagga accagaaact aaggctatca aggagtgaga
     4321 tagaatgaac agacactcct agttttcctc cagccagggt tgctagtgct agagagcaca
     4381 gtgataggca cctgggtgta aaggacccat tcctcatcct gccactgccc aaccttctcc
     4441 cgatgaccgt ggcatgtacc ttttcctctc ccctgacccc cttccctaac cccagctggc
     4501 tagcacagca gagtttgggt gctggcagtg tggctggagg ggaggcgaga ccacatctaa
     4561 ggtaggggcc atggccgtga atgtggatga cacttgttct cctgacctgt ggtgttgcag
     4621 tctgttgtca ccagccttgt tttagtgtgt atatatgtcg cccctgtgat gcatatatac
     4681 acaggtatta aatatatcac tctatataat attatatatg tgtgtggtat ccaaggaatc
     4741 tcttctattg agggctaaag ataaagaatt tggcacacaa aaaaatgcag acatccttgt
     4801 gaattttgag tgcttatggg gtcatctggt tatttaggga actgagacgg gagccatggc
     4861 tcagagatga tttgggcagg aagggcaggg tggcccacac cggggccttg ctcggactgc
     4921 tagtttccca cagacccatg tctaaagaag aataccagtg tgctcaggaa aaggaagtaa
     4981 tcagtgtttc ccaacggaga gggatgaatc cagagttttc ctactgttca tctgtccagg
     5041 ggtccctaag atctgggctt ccttatattc tagacctgtg tccccaacac ggaagagaag
     5101 agaaagacga tgggataacc tggggtgggg aacaacaaaa catcctaaat gatgactata
     5161 gttaatcaga tgtggcccct ctagggcctc tggttggaag gctcagggtt gaagcaggcc
     5221 taggagcaag agcaagatta cacagtagac atggagtggg ggcagcggca ggggatgctg
     5281 catttctcag ctgggcagta atcaatctaa taatggtcct ttaaaaatgt ctgtattaaa
     5341 atataagaat accacacttt aatattaaat atcataaggt ctagtatctt gataataatg
     5401 tagatgtttt aataacaatt tttgtccttc ttaaaataaa atgagagaga aatttgcttc
     5461 ttttag
//
