LOCUS       NM_001107469            3691 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger CCCH type containing 12D (Zc3h12d),
            mRNA.
ACCESSION   NM_001107469 XM_001068699 XM_218069
VERSION     NM_001107469.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Huang,S., Liu,S., Fu,J.J., Tony Wang,T., Yao,X., Kumar,A., Liu,G.
            and Fu,M.
  TITLE     Monocyte Chemotactic Protein-induced Protein 1 and 4 Form a Complex
            but Act Independently in Regulation of Interleukin-6 mRNA
            Degradation
  JOURNAL   J Biol Chem 290 (34), 20782-20792 (2015)
   PUBMED   26134560
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Wang,W., Zhang,Z., Yang,B., Zhang,H., Ge,Z., Liu,H. and Jiang,T.
  TITLE     [Down-regulation of Zc3h12d expression in lung tissues of rats with
            acute lung injury induced by intestinal ischemia-reperfusion]
  JOURNAL   Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi 30 (4), 355-359 (2014)
   PUBMED   24721400
  REMARK    GeneRIF: IIRI can down-regulate Zc3h12d gene expression in lung
            tissue
REFERENCE   3  (bases 1 to 3691)
  AUTHORS   Minagawa,K., Wakahashi,K., Kawano,H., Nishikawa,S., Fukui,C.,
            Kawano,Y., Asada,N., Sato,M., Sada,A., Katayama,Y. and Matsui,T.
  TITLE     Posttranscriptional modulation of cytokine production in T cells
            for the regulation of excessive inflammation by TFL
  JOURNAL   J Immunol 192 (4), 1512-1524 (2014)
   PUBMED   24415781
REFERENCE   4  (bases 1 to 3691)
  AUTHORS   Minagawa,K., Katayama,Y., Nishikawa,S., Yamamoto,K., Sada,A.,
            Okamura,A., Shimoyama,M. and Matsui,T.
  TITLE     Inhibition of G(1) to S phase progression by a novel zinc finger
            protein P58(TFL) at P-bodies
  JOURNAL   Mol Cancer Res 7 (6), 880-889 (2009)
   PUBMED   19531561
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473994.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_218069.4, XM_001068699.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06680414,
                              SAMN06680416 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..3691
                     /gene="Zc3h12d"
                     /note="zinc finger CCCH type containing 12D"
                     /db_xref="GeneID:308266"
                     /db_xref="RGD:1597152"
     exon            1..93
                     /gene="Zc3h12d"
                     /inference="alignment:Splign:2.1.0"
     exon            94..477
                     /gene="Zc3h12d"
                     /inference="alignment:Splign:2.1.0"
     CDS             164..1765
                     /gene="Zc3h12d"
                     /codon_start=1
                     /product="probable ribonuclease ZC3H12D"
                     /protein_id="NP_001100939.1"
                     /db_xref="GeneID:308266"
                     /db_xref="RGD:1597152"
                     /translation="MERRGKMEFFQKLGYSQEDVVRVLGKLGDGALVNDVLQELIQTG
                     SRPKAQEDPANGTGIVLMPRGCCGVRDSAQQGLGLGLEEAGGDPASFLRPIVIDGSNV
                     AMSHGNKEAFSCRGIRLAVDWFRDRGHTYIKVFVPSWRKEPSRSDTPIREQHVLEELE
                     RQAVLVYTPSRKVNGKRVVCYDDRYIVKLAYEKDGVIVSNDNYRDLQNENPEWKWFIE
                     QRLLMFSFVNDRFMPPDDPLGRRGPTLSNFLSKKPRPPEPSWQHCPYGKKCTYGVKCR
                     FYHPERPHQGQLPVADELRAKTRAWPGGGAGESRPPSARSRPGAARPLPLEPGAHNPT
                     PAPQPAALTALNQSFARLTFSDTAASGVVSLSRGPDRMPTSGPTSWASPSLRAGSVAT
                     QGSPGLRCLRTPNSLLSPGDLGSPICPQSQPSDRHCSRGMHSDLPPQRRPPEDPWAFL
                     PSSYGYLNHSVWAESAWSENTFGRPSGSAQSTINSGGTRASLCSAFPSDREDPVMASD
                     PVLSDVALRTLLQRSQKTGAPLGDP"
     exon            478..617
                     /gene="Zc3h12d"
                     /inference="alignment:Splign:2.1.0"
     exon            618..852
                     /gene="Zc3h12d"
                     /inference="alignment:Splign:2.1.0"
     exon            853..959
                     /gene="Zc3h12d"
                     /inference="alignment:Splign:2.1.0"
     exon            960..3691
                     /gene="Zc3h12d"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgagcactc cctagttgaa aagagagggt cagtgtgaag gctcaggcag ctgggccaag
       61 tctgctggga gagcacgagg gacacacctg ctgctcatgc cagtgcagct ctgccaggag
      121 gaagctcggg gcaggagccg ggccaagcaa cagttggcac gatatggagc gtcggggcaa
      181 gatggaattt ttccagaaac tgggctacag ccaggaggac gtggtcaggg tgctgggcaa
      241 actgggtgac ggtgccttgg tcaatgacgt gctgcaagag ttgatccaga ccggcagccg
      301 cccaaaggcc caggaggatc cagccaatgg caccgggata gtgctcatgc ctcggggatg
      361 ctgcggggtt cgagactctg cccagcaggg cctgggacta ggcctagaag aggctggcgg
      421 agatccagcc agcttcctgc ggcccatagt gatcgatggc agcaatgtgg ctatgagtca
      481 tggaaataaa gaagccttct cttgccgggg aattcgtctg gccgtggact ggttcaggga
      541 cagaggacac acctacatca aggtttttgt cccatcttgg agaaaagagc catcaaggtc
      601 tgatacccct atcagagaac agcacgtgtt ggaggaactg gagcgacagg ctgtgctggt
      661 gtacacccca tcccgcaagg tgaacggcaa gcgagtggtc tgctacgacg atcgctacat
      721 cgtgaagctg gcctatgaga aggatggcgt cattgtctcc aatgacaact accgggacct
      781 gcagaatgag aacccggagt ggaaatggtt cattgagcag cggctactca tgttctcctt
      841 tgtaaatgac aggttcatgc ctcctgatga ccccctcggc cgtcgaggac caacactaag
      901 caatttccta agcaagaagc caaggccccc agagccatcc tggcagcact gtccctatgg
      961 caagaaatgc acctacgggg tcaagtgcag attctaccac ccggagagac cacaccaagg
     1021 gcagctgccg gtggcagacg aactccgtgc caagacgcgg gcttggccgg gtggtggcgc
     1081 cggggagtcg cggccaccga gcgcccggag ccgtcccgga gcagcccggc cgcttcccct
     1141 ggagcccggc gctcacaacc ccacgccggc cccgcagccc gcggccctga cagccctgaa
     1201 ccagagcttc gctcggctga ccttcagcga tactgcggcc agtggcgtcg tgtccctgtc
     1261 gcgtgggcct gaccggatgc ccacgagtgg tcccacgtcc tgggcctcgc catcccttcg
     1321 cgcgggcagc gttgccaccc aagggtcgcc gggtctgcgg tgcctccgga ctccgaacag
     1381 cctgctctct ccgggcgatc tcgggtcccc aatctgccca cagtcccagc catcggacag
     1441 acactgttcc aggggcatgc acagtgacct gcctccccag cgcagaccgc cggaagaccc
     1501 gtgggccttc ctgcccagct cctatggtta tttgaatcac tcggtttggg ctgagtcggc
     1561 ttggagcgag aacacctttg gaagaccttc ggggtcagca caatccacca tcaacagtgg
     1621 gggaactcgc gcttcactct gcagcgcctt cccatctgac cgagaggacc ctgttatggc
     1681 ctcggatcct gtgctctcag acgtggccct gcgcaccctc ctgcagagat cccaaaagac
     1741 tggtgctccg ttgggggatc cttaggggac aggttcataa cactgcaagg ggtggtggcc
     1801 caggcttgac tctctgcttg ggtaggtggg atacaagatg cttgttaatt tggatgtgtc
     1861 cctgcagttg aacgacattt tttaaaggtg gtctcggtgg gagctttctc aatcctcagt
     1921 ggtggatacc ggtggggatc ttggggatgc tctctgaagc cagggtctgc ttcatgagca
     1981 ggatgatttc tgatgtattt ggaaggcttt gtccagagca catctaaatc cggttctaac
     2041 tagcatccaa aaatgtttca gctggtcatc accgctagcc aaggtgattg gcctgagttt
     2101 gacataaact cttggagtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     2161 gtgtttagaa ttctagaaaa ccaggagaac ttaacatgtc gttgtagttg aaagattgaa
     2221 aaaggctggt aagtcagtct tgacttttgt ggtgtcaaat gatgtataac acatgttcag
     2281 gtgacacagg aaggaaggaa ggtattgctg tctggagttt tcaagtcact attgctaatc
     2341 tcactcatag gggaaactca gccttgtgta aattttactg tggggttgtc ccaggggaac
     2401 ttgatcctac gggtctcctc cctgggtttt tattcttttt gtacatacat accatattac
     2461 cgaaacatca caacacacac gcacacgtac acgcacacaa ccttgctcaa gactcagcct
     2521 ggcttttttt tttttttttt aaatcagcct tcctttgtgt gattctacaa aatttaaact
     2581 gcaccttata gagataggat ttcaatctac ccaccacccc cttaaaaaac aacaacaaca
     2641 acaacaactc agcagtcaac aacaatccag gttggtcagc atagagttgg attctggtag
     2701 aggtttattg caactttact tagctgtgtc ttctagataa cttctgctct gggttttgtg
     2761 gggaggagag gctcattcat tcacaaggga caagaaatga tacagtgttg ctggggcatg
     2821 ggcccagcat tctgagggaa cccagcatct gtaggctgca cccacatgtt ccagttacaa
     2881 cggcagcctg ccaggttgta actcatttgt tcctgaggga cttagtagtt catttggtca
     2941 gagagagtca gaagggacct gccaatggga cctgtttgcc aaagcctccg agttcctgca
     3001 gtgtggtagg cacatttggg aaacacccct tcattgcctc agggaaaatg ccgttgcagt
     3061 attcatggta aacttgactc cttggcacca gggtagccat atggcttcct ggaagtcctc
     3121 cctcttttaa aaccaccttc ttagcatggc ttcttgtgga tctgttcctc acaccctttt
     3181 caaaacgtat gctattctca gactgttgct tcttatcttg agtccctgtc ctgaagaggg
     3241 tttgctcttt ctagatcttt tgaagttttt cctcgtgtgt gtgtgtgtgt gtgtgtgtgt
     3301 gtgtgtgtgt gtgtgtgtgt gttcttttca taggactctt agagccgctg tttgattccc
     3361 tggtcttgtc ccctgcttca aatcaatcca ttgcgaattt acagttggaa atgtttaaac
     3421 tgcttcctat gaagacaagt ttgagtttta gtaagctgta aagctatttt atttggttca
     3481 ctgtgattaa gaaaaaaggg aaggaaaaaa agaggtgtgt gtgtgtaggg gaaagaaaca
     3541 acacatctca gatgtaatca cctttggaaa attccaaagt cttagtatgt ccttgtgaca
     3601 caaaacggtg gatgagagac ataaatgaac tgtccctagt tgcatagctg ttaaccatgc
     3661 tccaaaaata aaccaccttt tccacacctg a
//
