LOCUS       NM_001108146            2709 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus zinc finger CCCH type containing 12C (Zc3h12c),
            mRNA.
ACCESSION   NM_001108146 XM_001071727 XM_236237
VERSION     NM_001108146.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473975.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001071727.1, XM_236237.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN12840131
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..2709
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /note="zinc finger CCCH type containing 12C"
                     /db_xref="GeneID:315658"
                     /db_xref="RGD:1565078"
     exon            1..78
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..2709
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /codon_start=1
                     /product="probable ribonuclease ZC3H12C"
                     /protein_id="NP_001101616.1"
                     /db_xref="GeneID:315658"
                     /db_xref="RGD:1565078"
                     /translation="MAAEKTLQEYGVLCIQEYRKSSKVESSARNSFMGLKDHLGHDLG
                     HLYMESADPQISAAVPWPMAEKPTMDTVSAGKEEKGVSEENVSSGDSEESTNSDHESE
                     QLSSLSVEPCLLTKTHRQLCRSPCLEPHLLKHSDVLQDFKPEESQTPSKEVKKPPDVV
                     REYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEADQTVSTVNS
                     AMRETSSLESQRSESPMPEIVTDDGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVD
                     WFLERGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVC
                     YDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPL
                     GRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGSQPQRSVADELRA
                     MSRNTAAKTTNEGGLVKSNSVPCSTKADSTSDVKRGAPKRQSDPSIRTHVYQDIEEKL
                     PTKNKLETRSVPSLVSIPATSTAKPQSTTSLSNGLPSGVHFPPQDQRPQGQYPPMMMA
                     TKNHGAPMPYEQYPKCESPVDVGYYSMLNAYSNLSISGPRSPERRFSLDTDYRVNSVA
                     SDCSSEGSMSCGSSDSYVGYSDRSYVSSPDPQLEENLKGQHMHPHSRLNSQPFLQSFH
                     DPLTRVQSYSHEEPKFHHKRPLPHLAMHLQHPAVGARSSCPGDYPSPPSSAHSKASHL
                     GRSLVATRIDSISDSRLYDSSPSRQRKPYSRQEGLGSWDRPSYGMDAYGYRQTYSLPD
                     NSTPPCYESITFQSLPEQQEPTWRIPYCGMPHDPPRYQDSREKIYINLCNIFPPDLVR
                     LVMKRNPHMTDAQQLAAAILVEKSQLGY"
     exon            79..830
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /inference="alignment:Splign:2.1.0"
     exon            831..970
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /inference="alignment:Splign:2.1.0"
     exon            971..1205
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /inference="alignment:Splign:2.1.0"
     exon            1206..1312
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..2709
                     /gene="Zc3h12c"
                     /gene_synonym="RGD1565078"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgcctg gcggaggggg cccggggccg gcccggcttc cagagcatgc cgtgatggct
       61 gcggagaaga cattgcagga atacggggtg ctttgcattc aagaatacag gaaaagcagc
      121 aaagtggagt caagtgcacg gaacagcttc atgggcttga aggatcacct ggggcatgac
      181 cttggccacc tttatatgga gagcgctgac ccacagataa gtgcagctgt gccttggccc
      241 atggcagaga aaccaacaat ggatacagtc agtgcaggga aggaagaaaa gggggtgtct
      301 gaagagaacg tgagctctgg tgactctgag gaaagcacga attctgatca tgagtcagaa
      361 caactgagta gcctttcggt agagccatgc ttattaacca agactcacag acaattgtgt
      421 cggtctccct gcttagaacc tcacctactg aaacacagtg atgttttgca agactttaaa
      481 ccagaagagt cccagactcc atccaaggaa gtgaagaaac cccctgatgt ggttcgagaa
      541 taccaaacaa aactggagtt tgcacttaag ttaggttatt ctgaagaaca ggtccagctt
      601 gtgctaaaca aacttggtac tgatgcttta atcaatgata tattgggaga acttgtcaaa
      661 cttggaaata aaagtgaagc tgatcaaaca gttagtactg ttaacagtgc gatgcgagaa
      721 acatcgtccc tggagtctca gaggtctgaa tcgccaatgc cagagatcgt gacagatgat
      781 ggtgaaaatc tgaggccagt agttattgat ggcagcaatg tggcaatgag ccatggaaac
      841 aaagaagtgt tctcatgccg aggaataaaa ttggcagtgg attggttttt ggaaagaggc
      901 cacaaagata tcacggtctt tgttccagct tggagaaaag aacagtcgcg acctgacgcc
      961 cttatcacag atcaggaaat tttacgtaaa ctagagaagg aaaaaatcct ggtgttcaca
     1021 ccatcacggc gtgtccaggg caggcgcgtg gtgtgctatg acgacaggtt catcgtgaag
     1081 ctggcttttg aatccgatgg tataattgtg tccaatgata actacagaga tctggcaaat
     1141 gaaaagccag aatggaagaa gttcatagat gaacggctat tgatgtactc cttcgtcaat
     1201 gacaagttca tgcccccaga tgacccactt ggcagacatg gcccaagtct ggataatttt
     1261 ctgaggaaga agcccattgt tcctgaacac aaaaagcagc cctgtcccta tggaaagaag
     1321 tgtacgtatg gacacaagtg caaatattac cacccagaaa ggggcagcca gcctcagcgc
     1381 tcagtggctg atgaacttcg tgccatgtct agaaacacag cagccaaaac tacaaatgaa
     1441 gggggactgg tgaagagcaa cagtgttcct tgcagcacca aggctgatag cacttcggat
     1501 gttaaacgag gtgctccaaa gaggcagtca gacccaagca taaggactca cgtctaccaa
     1561 gacatagagg aaaagcttcc caccaaaaac aagttggaaa ccaggtctgt accttcctta
     1621 gttagtatcc cggccacttc tactgcaaaa ccccaaagca ctacatcttt aagcaatggc
     1681 cttccatctg gagttcattt cccacctcag gatcaaagac cacagggaca ataccctcca
     1741 atgatgatgg caaccaaaaa tcatggcgcg ccaatgcctt acgaacagta tccaaaatgt
     1801 gagtcccctg ttgatgttgg ctattattcc atgttgaacg catattctaa tctgagtatc
     1861 tcaggccccc gaagtcctga aaggcgtttc tccctagaca ctgattatag agtcaattct
     1921 gtagcttcag actgcagcag tgaggggagc atgagctgtg ggagcagcga ctcctacgtg
     1981 gggtacagtg accgctccta cgtcagctct cctgacccac agctggaaga gaatctcaag
     2041 ggtcaacaca tgcaccctca cagccgcctt aactcccagc ccttcctgca gagtttccac
     2101 gatcccttaa ccagagttca gagttacagt cacgaagaac caaagttcca tcacaagcgt
     2161 cctcttccac acttggctat gcatctgcag caccctgccg tgggtgcccg ctccagctgt
     2221 cctggcgact acccctctcc accaagttca gcacactcta aggcatcaca cctagggagg
     2281 tccttagtgg ccacgagaat agacagcatt tctgactctc gactctatga tagttctcct
     2341 tcaagacaaa gaaagcctta ttctcgccag gaaggcctag gaagctggga taggccaagc
     2401 tatgggatgg acgcgtatgg ctaccggcag acttactcct tacccgacaa ttccacaccc
     2461 ccctgctatg agtcgatcac cttccagagc ctgcccgagc agcaggagcc gacctggagg
     2521 atcccttact gcggaatgcc acacgaccct ccgaggtacc aggacagccg agagaagatt
     2581 tatatcaact tgtgcaacat cttcccccct gaccttgtga ggctcgtcat gaagaggaat
     2641 cctcacatga cagatgccca gcagctcgcg gcagccatct tagtggagaa gtcgcagctg
     2701 ggttactga
//
