LOCUS       NM_001034942            2702 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 44
            (Zbtb44), mRNA.
ACCESSION   NM_001034942 XM_343366
VERSION     NM_001034942.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            [WARNING] On Mar 13, 2025 this sequence was replaced by
            NM_001034942.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001034942.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC104680.1, SRR26643429.29567.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-104               JAXUCZ010000008.1  37724688-37724791
            105-1178            JAXUCZ010000008.1  37747440-37748513
            1179-1263           JAXUCZ010000008.1  37768061-37768145
            1264-1427           JAXUCZ010000008.1  37770183-37770346
            1428-1511           JAXUCZ010000008.1  37772485-37772568
            1512-2702           JAXUCZ010000008.1  37775166-37776356
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..2702
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /note="zinc finger and BTB domain containing 44"
                     /db_xref="GeneID:363035"
                     /db_xref="RGD:1308984"
     exon            1..104
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /inference="alignment:Splign:2.1.0"
     exon            105..1178
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..1522
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /note="BTB/POZ domain-containing protein 15; BTB (POZ)
                     domain containing 15"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     44"
                     /protein_id="NP_001030114.1"
                     /db_xref="GeneID:363035"
                     /db_xref="RGD:1308984"
                     /translation="MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDRIFRA
                     HKVVLAACSDFFRTKLVGQTEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENII
                     DVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKGLDAGQENSSNCNFTSRDGSI
                     SPVSSECSAVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTNSPQVLNSSASYAENR
                     NQPVDSSLAFPWTFPFGIDRRIQPEKAKQAENTRTLELPGPSEAGRRMADYVTCESTK
                     TTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEPVQEDLLISP
                     QSSSIGSVDEGVTEGLPTLQSTSSTNAHADEDDRLENVQYPYQLYIAPSTSSTERPSP
                     NGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDCCGKKFTRAYSLKMHRLKHE
                     VIS"
     exon            1179..1263
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /inference="alignment:Splign:2.1.0"
     exon            1264..1427
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..1511
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /inference="alignment:Splign:2.1.0"
     exon            1512..2702
                     /gene="Zbtb44"
                     /gene_synonym="Btbd15; RGD1308984"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgggttgc cgccgctacc gccaccgcca cctcgccgcc ccagcctggc ggggaagagg
       61 aggagcagtt gcaggcctcc gggcccccgc accgccgccc gcagggtaat tctgattcat
      121 tgcatccttg aagagcatca atagaagagg gggaaaaaag atgggtgtga aaacatttac
      181 tcacagctcc tcttcccaca gccaggaaat gctgggaaaa ctaaatatgc tacgaaatga
      241 cggacatttt tgtgatatca ctattcgtgt ccaggacaga atcttccggg ctcacaaggt
      301 ggtactagca gcttgcagtg atttctttcg aaccaaactt gtgggccaaa cagaggatga
      361 gaacaaaaat gtgttggatc tgcatcatgt tacagtgact ggctttatac ctctgctgga
      421 atacgcttac acagccactc tgtccattaa cacggaaaat attattgatg ttctagcagc
      481 agccagctat atgcaaatgt ttagtgttgc tagtacgtgc tcagagttca tgaaatcaag
      541 tattttgtgg aatacaccta atagccaacc agaaaagggt ctagatgctg gacaagaaaa
      601 tagttccaac tgcaatttta cttctcgaga tggaagcatt tctccagtgt cttccgagtg
      661 cagtgctgtg gaaaggacca ttcctgtctg ccgagagtcc cggagaaaac gcaaaagcta
      721 cattgttatg tctcctgaga gccctgtaaa atgtagcaca caaacaaatt ccccccaggt
      781 actgaattct tcagcttcct atgcagaaaa tagaaatcag ccagttgatt cttctttagc
      841 gtttccatgg actttccctt ttggaattga taggaggatt cagcctgaga aagcaaagca
      901 ggcagaaaat acccggactt tagagttgcc tggcccgtcc gaggcaggta gaaggatggc
      961 tgactatgtg acttgtgaga gcacaaaaac taccttgcct ctaggtacag aagaagacgt
     1021 ccgggtcaaa gtagaaagat taagtgatga ggaggttcat gaggaagtgt cccagcccgt
     1081 tagtgcatct cagagctcac tgagtgatca gcagacggtg cctggaagtg aaccagttca
     1141 agaggacctt ctgattagtc cacagtcttc ctctataggc tcagtggatg aaggagtcac
     1201 tgaaggattg cctacacttc agagcacttc cagcaccaat gctcatgcag atgaggatga
     1261 cagattggaa aatgttcagt atccctatca actgtacatt gctccttcta ccagcagtac
     1321 agaacgacca agtccaaatg gtccagacag accttttcaa tgtccaacct gtggggttcg
     1381 cttcacccgt attcagaatc taaaacagca catgcttatc cactcaggaa ttaaaccatt
     1441 tcagtgtgac tgctgtggaa aaaagtttac cagggcttac tcgctaaaga tgcatcgcct
     1501 aaagcacgaa gtgatttctt agtaccggac tacttaagcc aggagcaaga agaggccctt
     1561 gttcagtatg atcttggaga gcacacttct gaaagcagct cttctgttca aatgcctgtg
     1621 atttcacagg tctcctcaac ccacaactgt gaaagcactt ttcccctggg gtctcttggt
     1681 gggcttgcag aaaaggagga ggacctgcaa gagcagccaa agaccagtgc tcacgatgat
     1741 gctccccgag atgacccccc caaggcagag ctgtcttcta taactattga gtgattctgt
     1801 gattggcctg ggttttgggg tttttttgtt ttgttttgtt tgtttgtttg tttgtttgtt
     1861 ttggaaagtg cctgtgcttg gtctcatatg tttaaattta atttaatttt ttaaaaaggg
     1921 gttccctttg taagctctga aactagaggg ttctttgttt tgttttgttt tttcatagct
     1981 ttagtatgta tacaataagg taacattgaa acagaacata aactttaaga gtaaggaaaa
     2041 gcagctgact tagaacatgg cagttcttcc attgttaaaa gtgggcagca gcagatacaa
     2101 aagaagtcgg gttgttgttg acctttctga gataagaggg ctaatgagaa gttactaaag
     2161 agtttgacaa agcctaagga atgtttactc ctggacacag ggtgttagaa accctgtagt
     2221 tttggaagaa tttacggtat tttttttttc agatgacggt aaataacttc tgaaatccag
     2281 tatattcttt tttttttttt taagccattt tggattttca tggtgaaaaa ttagtatcag
     2341 gcaggtattt tctgtacctt tgtagtactc ctccaaaggc taggtgtggt tgagaagagt
     2401 caggcgcgcg tggaatggca gggcgcagaa cgaggtacgt atacccagct ttgcaggaac
     2461 tctcttcaga ctgttttttt tactggccat tgactgctga catctggtta actaggacat
     2521 tgctcagata agtgtcctcg tgtcccatca acagcacttt cacttgcata tatactattg
     2581 tgctgccata taaaagaaaa atattgaaga tattctatat tttatatata ggtttatgta
     2641 ttgttgagga tgtcgatgct gtgctgtttt ggacaaaata aaagaattct gttttgaggc
     2701 ta
//
