LOCUS       NM_001012094            5108 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 43
            (Zbtb43), mRNA.
ACCESSION   NM_001012094 XM_231153
VERSION     NM_001012094.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5108)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 5108)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087042.1.
            
            On Feb 11, 2005 this sequence version replaced XM_231153.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087042.1, CK480605.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN14984036 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5108
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..5108
                     /gene="Zbtb43"
                     /gene_synonym="Zfp297b"
                     /note="zinc finger and BTB domain containing 43"
                     /db_xref="GeneID:311872"
                     /db_xref="RGD:1310287"
     exon            1..100
                     /gene="Zbtb43"
                     /gene_synonym="Zfp297b"
                     /inference="alignment:Splign:2.1.0"
     exon            101..161
                     /gene="Zbtb43"
                     /gene_synonym="Zfp297b"
                     /inference="alignment:Splign:2.1.0"
     exon            162..250
                     /gene="Zbtb43"
                     /gene_synonym="Zfp297b"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..1677
                     /gene="Zbtb43"
                     /gene_synonym="Zfp297b"
                     /note="zinc finger protein 297B"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     43"
                     /protein_id="NP_001012094.1"
                     /db_xref="GeneID:311872"
                     /db_xref="RGD:1310287"
                     /translation="MPTNVYSSQIGHQGQSKVRFHQSPTCRTTLNKIGDEMEPGTNSF
                     QVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHIFQAHKAVLAASSPYFCDQVLLKN
                     SRRIVLPDVMNPRVFENILLFSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLE
                     GNPTVLCQKLNHGSDHQSPSSSNYNGLAESFELGSGGHTDFPKAQELRDGENEEESTK
                     DELSSQVTEHEYLPSNSSTEHDRLSTEMASQDGEEGTNDSTEFHYTRPLYSKPSIMPH
                     RRWIHVKPERLEQPWDGMDVHAAYDEHQVSESVNTMQTDHSAQPSGAEEEFQIVEKKV
                     EVEFDEHAEGSNYDEQVDFYGSSMEEFSGEKLGGGLIGHKQETALAAGYSENIEMVMG
                     IKEEASHLGFSATDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCSVCGKKFKMKHH
                     LVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAGQNTTEAN"
     exon            251..5082
                     /gene="Zbtb43"
                     /gene_synonym="Zfp297b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcggaagtt gtccccgcgg tggcggcgga gaataaggcc ttcgtacggc aacagggacg
       61 ctccggtagg ctggagctgg gagcgcggag ccgtctgaag actgctcttc gatggccatg
      121 acataaggaa cattatcctg ggaacacaac tttgctctcg gggagatgcc aacaaacgtt
      181 tattcatccc agatagggca ccaaggacag agcaaagtac gattccacca aagtccaact
      241 tgtcgaacca cactaaacaa gattggtgat gaaatggagc ctggaacaaa ctcttttcaa
      301 gtagagtttc cagatttttc cagcaccatt ctgcagaaac taaaccagca gcgccagcaa
      361 ggacagttat gtgacgtctc cattgttgtc caaggccaca ttttccaggc acacaaagcc
      421 gttcttgctg ccagttcacc ctacttttgt gaccaagtac tcctgaaaaa cagtaggaga
      481 attgttttgc ctgatgtgat gaacccaaga gtgtttgaga acattctttt atttagttac
      541 acaggacgcc ttgtaatgcc tgctccagaa attgttagtt acttaacagc agccagcttc
      601 ctccagatgt ggcatgtggt ggacaagtgc accgaggttc tggagggaaa ccccacagtc
      661 ttgtgtcaga agctaaacca tggcagtgac caccagtccc ccagcagcag taactacaat
      721 ggcctggccg agagctttga gctgggctct gggggccaca ctgatttccc caaagcccag
      781 gagctgaggg atggcgaaaa cgaagaggag agcaccaaag acgagctgtc atctcaggtc
      841 accgagcacg agtatctgcc cagtaactcg tccacggagc atgaccgcct gagcaccgag
      901 atggccagcc aggacgggga ggaggggacc aacgacagca cagagttcca ctacacccgg
      961 cctctgtata gcaagcccag catcatgcct cacaggcgct ggatccatgt gaagcctgag
     1021 cgcctggaac agccttggga tggcatggat gtgcacgcag cctacgatga gcaccaggtc
     1081 tccgagtccg tcaacaccat gcagacagat cactcggccc agccttcggg agcggaggag
     1141 gagttccaga ttgtggagaa gaaagtggaa gtagagttcg acgagcatgc agagggcagt
     1201 aactacgacg agcaggtgga cttctacggc tcctccatgg aggagttctc tggagaaaag
     1261 ttggggggcg gtctaattgg acacaaacag gagactgccc ttgcagcagg ctacagtgag
     1321 aacattgaga tggtgatggg gataaaagaa gaggcgtccc acttaggatt ctcagccacc
     1381 gacaagctgt atccttgtca gtgtgggaaa agtttcacgc acaaaagtca gcgagatcga
     1441 cacatgagca tgcacctcgg tctgcgcccg tatggctgca gtgtctgtgg taagaaattc
     1501 aaaatgaagc accatctcgt gggccacatg aaaattcata ccggcataaa gccctacgag
     1561 tgtaatatct gtgcaaagag atttatgtgg agggacagtt tccacaggca tgtgacttct
     1621 tgtaccaagt cctatgaagc tgcaaaggct gggcagaata cgactgaggc taactaaaaa
     1681 tagggtctgg cccttgagtg gcatgcacaa aaataaacta tggtaattaa tgcaaatctg
     1741 ggcacagatg atgcgtgcca cttgctatta tgagagaggc ttaaaaaaaa aggaagatat
     1801 ttctgaaaga ccagctctaa gtaggccaat taaaagattt aatttctcaa atctgtatgt
     1861 tcccatcctg gcctagaatg gatgatgggg ataagttcac ccagtgccca gctggcaaga
     1921 cagcccttcc agccagcagt ggttaaggca ggggactgga tggcagactc tcacaccagt
     1981 cctgcccagg tggcagcggc cggctgtcac cattgtcccg ggtcttgtta catttgttct
     2041 cctggtagct tcagggcttc tgggctttgc tttggtagct gcgtcactgg atgctgctcc
     2101 cctcaaggct acagcgagga ctcctgggct gagctacgag cagagctctg tttgttctat
     2161 tttcgtatgt tctaaaggtt ctagttaaag ccatggtgac attagacggg gcttctgagt
     2221 ccgaatcagg agacagtgtc accgtgctgc aggctctgga gaaggcacag ttttatgttt
     2281 gtgtttggtt aagtcttcag gtgccagaga cagagctttc tagttggtgt gttgtcctaa
     2341 gcttccctca gttaatggca ggagatgacc ggtttgcagt gacacacgac agtgctggct
     2401 agtagtggcc tgtggctccc tgccttagat cacggtgctt cccaacaagg ccagccaggg
     2461 accacagctc atgagactaa gccagaatgt gtggctaaga gttccctgtg agcaagacac
     2521 ttataacaga aggcttgaga aaagaatctt aaaaacactg gcgtggggag tgctgttgta
     2581 gagggtgggc taggcagtat tgtcagcttt gtgagagctg gaacatggct tccaagggga
     2641 tgggagccta cattaagcaa catcatctag agactctgtt ccccagtcac agagaaagcc
     2701 gcgtttacaa gtcccaatag tttatacaca catgtgcagg cgcacacaca cccacactca
     2761 cacttcacca ccaccatctc ctcactcccg caaggacgag gctgcccttg aggtcttttc
     2821 tgcatggtca gacgtcttag gttggaaaga aagcttgtgt tcagaaagct tttaagcgtg
     2881 tgacagttct gaggctcttg ctgggtaggg gtctagtgct ctttccatca ctggaataat
     2941 acactcggag caaagcaact tagggaggaa agggtttgta ttagctcaca ctaccatcat
     3001 ggaggaaacc acagcaggaa cgggaatgtt gacagtccag acagttggcc agtcatgccc
     3061 acaggccact ccctcagtgg agactcgctt cctctatgac tctaggttgt gtcagagcta
     3121 gctaggcagt aggacagggt tttactccta tatcatctgt ttcgttccta aagttcgact
     3181 ttctctaata tgacagacat tactggcaaa agtgtctgat atttaggctc tgaacaaagg
     3241 atgtaccttt gacctttgtc tggaaagagg aaagaaaatg tggactggcc agtaaacgtt
     3301 tgtaatcaag attacaaaac agggatctat ttacaaacac tgtatcaatc ttggcatata
     3361 aagcactttg tattaaaact ttattataag tatagatgta ggtttttttt tttaacctag
     3421 aaactagatg ttacctccta gtggtttgct acattaagat cttccagtgt ctgccagtca
     3481 gcgactgtcc ttgtccctga gaagtgagtg cagatggaca gtcacactca caggcacact
     3541 cacgcctcct actcttcaca cagaggccag cgggtttagg gatgacccgc tgtgtgaggg
     3601 cgaagtggtt ttggcttctt agtatttcta cactggggca gttaagccgt tttgttgtca
     3661 gaagcagccc tcttgttcac acctacctgc ctcccatcgg agtctattcg tacaagagct
     3721 gagacccttg cagagaagaa ttagagggta aaagaaccac catggggaca ccctggtcct
     3781 ggggttgtac tgagtcagga tcctttgtca tggtgctgac aaagcttttg agttggaatg
     3841 tggcaaaccc tgtgagaagg tggggtgtca tggtctagaa tgtgaagtga ggcttctggc
     3901 ctccctttcc caatagagag tctttctggc cgcctgcctc ctgcagtact agtctctccc
     3961 ctcaccactg ccttagaaat cctcaccctt ccgaacaagc tcgagtagtt gtgggcagca
     4021 ctgtccagcg tttcagggat tgtcagtggc ccaccagcaa agcgcatgtc tctacacttg
     4081 gctggttttc tccagtcctc atacgaaagg gcttcaaggc cccgctgctt gcatttccta
     4141 atcggcaggc accatggctt aacttcttgg atgtacatca caggagctcc ttttgtgttg
     4201 tggtttgccc tcgtgctcct ctgagccctg gcccatgacc tcgaatttct gttctcccct
     4261 tctccgccca cattcttaga gcccgcatta aaggctcccc tacattgcag gaagtgtttc
     4321 ctgaactact ctgacctggg cgggttttta gcagttggga aagctgcgag ctgcagtggg
     4381 tggcaaagtt gaggaatatt tgggaaagtc cctagggtca gggtggcact ccacctcgtc
     4441 cacaaatgtg gttgtttcct aaactctcag atacacgggg aatgctgagg ccagcgggcc
     4501 aggatctagg cctcctggaa tctaggctgc cttgactggt aactaacttt atccagtgaa
     4561 tcctgagttg ctttgggttt tgttcttggt ttttgttttt tgttttgttt tgttttgttt
     4621 tgtttctctc tctctctctg ctatttacat atttaaaggt actgttttgc aaacctctac
     4681 tgatagtgcc ctgtgggaag atgctggaac gccgtttgca aatgtgattt tgtttttctt
     4741 tttaaatgtt gcttgaagcc tgtgtcgtct cagttgctgc tgcctccttt ctttttatga
     4801 ggttcccaat gtttcttcca gaaagttatt ttatttatgc aggtcaggtg actcttaggc
     4861 cccagaacca tgggatggta agcagattgt tgttaggtgc gtatcatgga tacttggtga
     4921 accacctgtg ttttagaagt taaatagttc tctctagaat tgctgtcttc agtgtacagc
     4981 gtggttttaa ttgaatgtta ctgtttaata ttttcttctt atagaagaga ccatgtcctt
     5041 ttgtatgaca agttttaata aatgttacct gtccattttg taaaaaaaaa aaaaaaaaaa
     5101 aaaaaaaa
//
