LOCUS       NM_001126302            1727 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 42
            (Zbtb42), mRNA.
ACCESSION   NM_001126302 XM_001078808
VERSION     NM_001126302.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Patel,N., Smith,L.L., Faqeih,E., Mohamed,J., Gupta,V.A. and
            Alkuraya,F.S.
  TITLE     ZBTB42 mutation defines a novel lethal congenital contracture
            syndrome (LCCS6)
  JOURNAL   Hum Mol Genet 23 (24), 6584-6593 (2014)
   PUBMED   25055871
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Devaney,S.A., Mate,S.E., Devaney,J.M. and Hoffman,E.P.
  TITLE     Characterization of the ZBTB42 gene in humans and mice
  JOURNAL   Hum Genet 129 (4), 433-441 (2011)
   PUBMED   21193930
REFERENCE   3  (bases 1 to 1727)
  AUTHORS   Takahashi,A., Hirai,S., Ohtaka-Maruyama,C., Miwa,A., Hata,Y.,
            Okabe,S. and Okado,H.
  TITLE     Co-localization of a novel transcriptional repressor simiRP58 with
            RP58
  JOURNAL   Biochem Biophys Res Commun 368 (3), 637-642 (2008)
   PUBMED   18262495
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC161864.1.
            
            On May 7, 2008 this sequence version replaced XM_001078808.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161864.1, CK366187.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..1727
                     /gene="Zbtb42"
                     /note="zinc finger and BTB domain containing 42"
                     /db_xref="GeneID:691556"
                     /db_xref="RGD:1582758"
     exon            1..99
                     /gene="Zbtb42"
                     /inference="alignment:Splign:2.1.0"
     exon            100..1702
                     /gene="Zbtb42"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..1379
                     /gene="Zbtb42"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     42"
                     /protein_id="NP_001119774.1"
                     /db_xref="GeneID:691556"
                     /db_xref="RGD:1582758"
                     /translation="MEFPEHGVRLLGRLRQQRELGFLCDCTVLVGDARFPAHRAVLAA
                     CSVYFHLFYRDQPASSRDTVRLNGDIVTVPAFSRLLDFMYEGRLDLHSLPVEDVLAAA
                     SYLHMYDIVKVCKGRLRKKDPDLETRTLGTELPGQTPHPLPSWPPAFCQATPKAKPPS
                     LGVKAVHPLPKFGPPSWQVSEESSGALDLSLKPGPRPEQAHPPCLLQTSQCSSIQQGA
                     QPLVKAEQDSFSEQDSSSPQSADRSPPPVCASAARGLAVNLEPLHIQGTGSQQLGLHA
                     EPVVDSEDLGPGRHLCICPLCCKLFPSTHALQPHLSAHFRERDSVRTRLSPEGAVPTC
                     PLCSKTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYSHNLSRHAVVHTREKPHACRW
                     CERRFTQSGDLYRHVRKFHYGLVKPLLV"
ORIGIN      
        1 ggcgccctcc cggccggggc gcgccacccg tagctcggtg aggtccgagc tgcacgggaa
       61 agcttgcaga acgagcggag agccgcgcgt gcggcggagg tgatgactgc ggcggcatgg
      121 agttcccgga gcacggcgta cggctgctgg gccgcctgag gcagcagcgc gagcttgggt
      181 tcctgtgcga ctgcactgtc ctggtgggcg acgcgcgctt ccctgcgcac cgcgctgtac
      241 tggccgcgtg cagtgtctac ttccatctct tctacaggga ccagcccgcg agcagccgcg
      301 acacagtgcg gctcaacggc gacatcgtca ccgtacccgc cttcagccgc ctgctggact
      361 tcatgtatga gggccgcctg gacctgcaca gcctacctgt cgaggacgtc ctggctgcag
      421 ccagttacct acacatgtat gacatcgtca aggtctgcaa gggcaggctc agaaagaagg
      481 acccagatct ggagacccgt acgctgggga cagagcttcc cgggcagaca ccacaccccc
      541 tgccttcctg gccccctgcc ttctgccaag ccacaccaaa ggccaaaccc ccatctctag
      601 gggtcaaggc tgtccatccc ctgccaaaat tcggacctcc atcttggcag gtctcagagg
      661 agtcgagtgg ggccctggac ctgtcgctga agcctggccc aagaccagag caggcccacc
      721 caccctgtct cctccagaca tcccagtgca gctccataca gcaaggggcc cagccactgg
      781 tgaaggccga gcaagattcg ttctctgaac aagatagcag cagcccgcag agcgcggaca
      841 gatccccacc accagtctgt gcttctgcag cccggggcct ggcagtgaac ttggagccat
      901 tgcacatcca aggaacaggc agccagcagc ttgggctgca tgcagagcca gtggtggaca
      961 gcgaagatct gggtcctggc aggcatcttt gcatttgccc gttgtgctgc aaactcttcc
     1021 ctagcaccca cgcactgcag ccgcatctca gcgcccactt ccgggagcgg gacagcgtcc
     1081 gtaccaggct ctccccggag ggggccgtgc ccacgtgccc cctctgcagc aagaccttct
     1141 cctgcacgta cacgctgaag aggcatgaac ggacacactc tggggagaag ccctatacat
     1201 gcgtgcagtg tggtaagagc ttccagtact cacacaactt aagccggcat gctgtggtcc
     1261 acacacggga gaagccccat gcctgccgct ggtgtgagcg ccgattcaca cagtctggtg
     1321 acctgtatcg ccatgtccgc aagttccact atggcctcgt caagcccttg cttgtgtgaa
     1381 gtgtttttct gcatccccga ggtggaggaa gagcagaggc agggtctccc cggatggaac
     1441 tctggggcag aggaagaagc ccaggctacc ccaaggctag aaggttgcac tggccaacct
     1501 gaatgaatgc tgctgcttct tggatgggtc acctcctcct cccctcccct ccacctgaca
     1561 cctgagcagg ttgtaccctg cccagtttag ggatactctg tccccactgt ccttcctctc
     1621 tagcaaggtc ctagagtgcc tggcctgccc gcccattcac tggccagtgt gagataatac
     1681 agttttcctc tgtcctgggg ctaaaaaaaa aaaaaaaaaa aaaaaaa
//
