LOCUS       NM_001191670            2727 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 41
            (Zbtb41), mRNA.
ACCESSION   NM_001191670 XM_222679
VERSION     NM_001191670.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2727)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            [WARNING] On Jun 8, 2024 this sequence was replaced by
            NM_001191670.2.
            
            On Jul 17, 2010 this sequence version replaced XM_222679.5.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.2563927.1,
                                           SRR26643298.51427.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1117              JAXUCZ010000013.1  53593713-53594829
            1118-1325           JAXUCZ010000013.1  53600812-53601019
            1326-1395           JAXUCZ010000013.1  53601789-53601858
            1396-1543           JAXUCZ010000013.1  53603729-53603876
            1544-1673           JAXUCZ010000013.1  53608747-53608876
            1674-1769           JAXUCZ010000013.1  53610241-53610336
            1770-1876           JAXUCZ010000013.1  53611997-53612103
            1877-1982           JAXUCZ010000013.1  53613433-53613538
            1983-2071           JAXUCZ010000013.1  53614447-53614535
            2072-2727           JAXUCZ010000013.1  53615853-53616508
FEATURES             Location/Qualifiers
     source          1..2727
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..2727
                     /gene="Zbtb41"
                     /note="zinc finger and BTB domain containing 41"
                     /db_xref="GeneID:289052"
                     /db_xref="RGD:1560834"
     CDS             1..2727
                     /gene="Zbtb41"
                     /note="zinc finger and BTB domain containing 41 homolog"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     41"
                     /protein_id="NP_001178599.1"
                     /db_xref="GeneID:289052"
                     /db_xref="RGD:1560834"
                     /translation="MKKRRKVTSDLDEKIHLGYHKDSSEENAAVECGQVTYTQSTERP
                     TPEALQCCQELPTSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSA
                     HKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVL
                     EAAKFLDIIDAVKLLNNENVATFQAELTDKSSPEETLNELTGRLSNNHQCKFCSRHFC
                     YKKSLENHLAKTHRSLLLGKKHGLKMLERSFSTRRSKRNRKCPVKFDDTSDDEQESGD
                     GSDNLNQESFDKERSDRNDSEDPGSDYNVEDEELEEEVSDEESDTEQSDKDNDAEEEP
                     EAADSAGSIHEGLAPVVIQNSNKKILQCPKCDKTFDRIGKYESHTRVHTGEKPFECDI
                     CHQRYSTKSNLTVHRKKHSSEVEFHKKEHKCPYCNKLHASKKTLAKHVKRFHPENAQE
                     FISIKKTKSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTYCEEHFKSRFARLKH
                     QEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLR
                     IHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIH
                     SGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSL
                     EMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDARPFNCQHCNATFKRKDKLKY
                     HIDHVHGIKSPDDSLSTSEEKLMSLPIEYSSDDKIFQAETKQYLDQPKVYQSEAKTML
                     QNVSAEVCVPVTLVPVQMPDTSSDLVSHTTTLPTSSHEMLPPQTQPTDYPRAADLAFL
                     EKYTLTPQPANIVHPVRPEQMLDPREPSYLGTLLGLDSTTAVQNMSTSEHRS"
     exon            1..1117
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1118..1325
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1326..1395
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1396..1543
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1544..1673
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1674..1769
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1770..1876
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1877..1982
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            1983..2071
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
     exon            2072..2727
                     /gene="Zbtb41"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaaaa ggagaaaggt tacttcagat cttgacgaga agatccatct aggctatcat
       61 aaagattctt cagaagaaaa tgctgctgtg gaatgtggcc aagtgaccta cactcagtcg
      121 acagaaagac caacccctga agctcttcag tgttgccaag agcttcccac ctctccggat
      181 cagagaaagc ttttgagttc tttgcagtac aataagaatt tgctgaagta cttgaacgat
      241 gataggcaga agcagccgtc tttctgtgat ttacttatca tagtagaagg gaaagaattc
      301 agtgctcata aagtagtagt tgctgttggc agtagttatt tccatgcgtg tttgagcaaa
      361 aatccaagca cggatgtcgt caccctggat cacgtaacgc attcagtttt tcagcatttg
      421 ctcgagtttc tttacacatc agagtttttt gtgtacaaat acgaaatacc tcttgtttta
      481 gaggcggcaa aatttttgga cattatagac gcagtgaagc tgctgaataa tgagaacgtt
      541 gctacgtttc aggcggaact cactgacaag tcgtccccag aagagacact aaatgaatta
      601 accggaaggc tatccaacaa tcatcagtgc aaattttgta gtaggcattt ctgctataaa
      661 aagtccttag agaaccattt agctaagact cataggtccc tgttactggg gaaaaaacat
      721 gggttaaaaa tgctggagcg cagtttctct actcggaggt ccaagaggaa tcggaagtgt
      781 cccgtgaagt ttgatgacac cagtgacgat gaacaggaaa gtggggatgg gtcagacaat
      841 ttgaatcagg aaagttttga taaggagagg tcggatagga atgactccga ggaccctgga
      901 agtgattata atgtggagga cgaggagctg gaggaggaag tgtcagatga ggagtctgac
      961 accgagcaga gtgacaaaga caatgacgca gaagaggagc ccgaggctgc tgactctgca
     1021 ggaagcatcc acgaagggtt ggctcccgta gtcattcaga acagcaataa gaagatcctg
     1081 cagtgtccca agtgtgataa gacatttgac cggataggga aatatgagag ccacacccgt
     1141 gtgcacacag gtgagaagcc ctttgagtgt gatatctgtc accagcgtta ttcgaccaag
     1201 tctaacctaa ccgttcacag aaagaagcac agcagcgagg tagagtttca taagaaggag
     1261 cacaagtgcc cttactgtaa taagctgcac gcgagcaaga agacgctagc caagcacgtc
     1321 aagagatttc atcctgaaaa tgcacaagaa tttatttcca ttaagaagac taagagtgag
     1381 agttggaaat gtgatatttg taagaaatct tttactcgaa gaccacactt ggaagaacac
     1441 atgattctgc attcacaaga taaacctttt aaatgtacct attgtgaaga acatttcaaa
     1501 tccagatttg cacggttaaa gcatcaagag aagttccatc taggaccctt cccatgtgat
     1561 atatgtggtc gtcaattcaa tgacactgga aatttgaaac gtcatataga atgtactcac
     1621 ggtggaaaga ggaaatggac ttgctttatt tgtgggaagt cagttcgaga aagaactact
     1681 ttgaaagaac atttgagaat acacagtgga gaaaagcctc atctttgtag tatctgtggg
     1741 caaagttttc gtcatggaag ctcatacagg cttcacttac gcgtgcatca tgatgataaa
     1801 agatacgagt gtgatgaatg tgggaagaca ttcattcgcc atgaccacct cacaaagcac
     1861 aaaaaaatac attcaggtga gaaggctcat cagtgtgaag agtgtggaaa gtgtttcggt
     1921 cgcagggatc acctcactgt ccattacaag agtgtgcatc tgggggagaa ggtgtggcag
     1981 aaatataaag caacatttca tcaatgtgat gtttgtaaga agatttttaa aggaaaatca
     2041 agtctggaaa tgcattttcg gacacattca ggtgaaaaac catacaagtg tcaaatttgc
     2101 aatcagtcat ttagaattaa gaaaacttta acaaaacacc tggttattca ctctgatgct
     2161 cggcctttca attgtcaaca ctgtaatgca acgtttaagc ggaaagataa gctgaagtac
     2221 cacattgacc atgttcatgg gataaaatct cctgatgatt ctctcagtac ttctgaggaa
     2281 aaactcatgt ctttgccaat agagtactca tctgatgata agatctttca agcagaaaca
     2341 aaacagtatc tggaccagcc caaagtttat cagtcggaag ccaagactat gctacagaat
     2401 gtgtctgcgg aagtatgtgt tccagtaaca ttggtcccag ttcagatgcc tgacacatcc
     2461 agcgatctgg tgtctcatac taccacactc cccacatcgt cccatgagat gctgccacca
     2521 cagacgcagc caactgatta tcctcgtgca gcagacttag catttctgga aaaatacact
     2581 cttactcctc agcctgcaaa tatagttcac ccagtccgac ctgaacagat gctagatcct
     2641 agagaaccgt cttatcttgg aacattactg ggccttgata gcacaactgc tgttcagaat
     2701 atgtccacta gtgagcatcg ttcatga
//
