LOCUS       NM_001399597            6531 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 34
            (Zbtb34), transcript variant 1, mRNA.
ACCESSION   NM_001399597 XM_039106210
VERSION     NM_001399597.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6531)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 12, 2022 this sequence version replaced XM_039106210.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887622.3171902.1,
                                           SRR21887622.3171903.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-97                JAXUCZ010000003.1  37123662-37123758   c
            98-217              JAXUCZ010000003.1  37120439-37120558   c
            218-6531            JAXUCZ010000003.1  37101033-37107346   c
FEATURES             Location/Qualifiers
     source          1..6531
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..6531
                     /gene="Zbtb34"
                     /note="zinc finger and BTB domain containing 34"
                     /db_xref="GeneID:689174"
                     /db_xref="RGD:1596130"
     exon            1..97
                     /gene="Zbtb34"
                     /inference="alignment:Splign:2.1.0"
     exon            98..217
                     /gene="Zbtb34"
                     /inference="alignment:Splign:2.1.0"
     CDS             186..1742
                     /gene="Zbtb34"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger and BTB domain-containing protein 34"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein 34
                     isoform 1"
                     /protein_id="NP_001386526.1"
                     /db_xref="GeneID:689174"
                     /db_xref="RGD:1596130"
                     /translation="MESTLEECNSRLRLVSGEMDSSSFIQFDVPEHSSTVLSQLNELR
                     LQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLL
                     SFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAE
                     ETPESRNGVKDGSFFTSPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHS
                     DRGSSGSVSEYEVQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYH
                     TEMVDGEQVVAVNVGTYGSVLQHAYPYSQAASQPSSVPEAFGGQTNSSPSRSMLSCFR
                     GRGARQKRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLIC
                     IYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEV
                     CGKCFPFQGTLNQHLRKNHPGVTEGRGRMESPERTDVYGEQKLESDASASEMALDSRL
                     EIHTVSDAPD"
     exon            218..6531
                     /gene="Zbtb34"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcagcgg gagcggcggg gaagggcctg gcgccggcgg cggcggcggc ggagggggcg
       61 ccgcgggcgg gcgatgtgaa cgcggcgcgc ggcccagctg acaaactgct gaatttagct
      121 tagtgaaggt cgccaactga gcacagttaa gcctctaatg gttattttct gttgatgttg
      181 ctggcatgga aagcaccctg gaagaatgca attcaagatt acgtctcgtg tcgggagaaa
      241 tggacagcag cagtttcatt cagtttgatg tgcctgagca cagcagcacc gttctgagcc
      301 aactaaacga gctccgcctg caggggaagc tatgtgacat tatcgtccac attcagggcc
      361 agcccttccg agcccacaaa gccgtcctcg cagccagctc cccgtatttc cgggaccatt
      421 cagcactgag cactatgagt ggcttgtcga tatccgtgat taagaacccc agcgtgtttg
      481 agcagttgct ctccttctgt tacactggaa gaatgtcctt gcagctgaag gatgttgtca
      541 gttttctgac cgcagccagc tttcttcaga tgcagtgtgt cattgacaag tgcacacaga
      601 tcctagagag catccactca aagatcagtg tgggagacgt tgattctgtt accattggtg
      661 ctgaagagac tcctgagagc cggaatgggg tgaaagatgg cagcttcttc accagtcctg
      721 ttgaaatctc ccctccgtac tgccctcagg tacgacagcc tccagtcagc agtgatctcc
      781 ggatggagac gacccccaac aaagcccttc ggagccgctt gcaggaagag gggcactcag
      841 atcgggggag cagtgggagc gtgtctgagt atgaggttca gatagaaggg gaccatgagc
      901 aaggggactt gttggtgaga gagagccaga tcaccgaggt caaagtaaag atggaaaagt
      961 ctgaccggcc cagctgctcc gacagctctt ccctgggtga tgatggctac cacacggaga
     1021 tggttgatgg ggaacaagtt gtggccgtga atgtgggcac ctacggctct gtgctccagc
     1081 acgcctatcc ctactcccag gcagcttcac agccttccag tgtgccagaa gcttttggag
     1141 gtcagaccaa ttccagtcca tccaggtcca tgctgagctg cttccgaggc cgtggggccc
     1201 gccagaagcg ggctctgtct gttcacctgc acagtgacct gcagggtgtg gtgcaggggt
     1261 ctgatagtga agccatgatg aacaatcccg gttatgagag cagtccccgg gagaggagtg
     1321 ccagagggta ctggtaccca tacaacgaga ggttgatctg tatttactgt gggaagtcct
     1381 ttaaccagaa gggaagcctc gacaggcaca tgcggctgca catgggcatc accccctttg
     1441 tgtgcaagtt ctgtgggaag aagtacacgc gcaaggacca gctggagtat cacatccggg
     1501 gccacaccga tgacaaaccg ttccgatgtg aggtctgtgg gaagtgcttt ccattccagg
     1561 gcaccctcaa ccagcacctg cggaaaaacc acccaggggt caccgagggc aggggtcgca
     1621 tggagtcccc cgaaagaaca gatgtatatg gggaacagaa acttgaaagt gatgcgtcag
     1681 cctcagagat ggcgctagat tcccgcctgg aaatccacac agtgtctgat gcgcctgact
     1741 aggacccgag caaagcacac cagtcagtgc atcgtcgtcg tgatttgctt tgttgtaatc
     1801 tttgctttcc ccaccaaatc tctcggtttt tcgctagttt ctctgaaagt tctgggtggg
     1861 gtacttcttg tgtttactct cccctccatt cctctccccc aaggagctca aagcatgaag
     1921 ggcagtgtat ccagggaaaa cacaggctga caatattcct ctttggctaa atgcttctcc
     1981 caactctgcc agtgattcag ctatgccaac tgattgaccc cacatgctct gccaggggcc
     2041 gcactcactg taggtgctag cctgggtgca ttttcacgga gagaggctag gatgccgtca
     2101 gctggtacaa atgggtaacc ttttctaatt taaaattact tttagggggt agttagacaa
     2161 tttatatata tatataataa agtggttatt atatatatag tatatataca ttctcaaatt
     2221 tgagtttatt ctggttgagg tgaatgtaag aggaatatat aatttaatac aatgtgaaca
     2281 gagctctggc tttgtttcag cccctcctac tatgttagtt ttaacccttc gtttccctta
     2341 cagaagaatg tcagtagact ttcatatata gtaatcattg tgtccaaatg caagcaaagc
     2401 aaatcacagt gttcgtagct ctgcttcata acaaacacat aaaccaaatg ccataaataa
     2461 ggttccttca actgtagtgg gaaaccattt tggaattttt gtttgttgtc caggtacact
     2521 ggacaacctg tggtgctgac ctttctacac agtgtagtgt tacattagcc agccccaaag
     2581 gaacagtggt tttcaaggtt tttactggct tacaactcta ccttcattcc gtactgtaga
     2641 cgcatacata ccaggtaact aaatcgctcc accttgagtt agtactctga ctaaaggaca
     2701 ggaatttgta gagcttgtct acaaaattct ccaagaagtg ttgtggtttt gttatttttg
     2761 ttatttcctt ttggttctct ctctctctct cctcaaaatc agccagttca ggtgcacagc
     2821 aacttttcta tgcagttccc agggaaactg cagaccttgg aatttgtact ttttgtaaag
     2881 ctatatactc tacgggaatt gcaagcaata tatctatctt agtattgtgt gtgctagtga
     2941 gagccccagt ggctccctca ctctcagtgt ttcctgctta aagaaaaaag tcagaactct
     3001 ctaagatcct ctgtgtgtta ccagatctgt gtatgtctca ccatttttgg tcatgtggtg
     3061 ctatttttat gttaagtata ggtcagtatc agtctagaaa atgtgaaacc taccagtagt
     3121 aatgacttag ttactttcct ctcaagttca cagcttgaaa agaaacctca aaagcatgtg
     3181 ctggcaaact gcttactgtc tgagctgtgt ccggtcagtg cttggagaat gtctgtttgc
     3241 cgttagattc atacacagca acaagcttcg cagatggctc tggtgctgtg gatcaggcag
     3301 agagcagttc agggagccgc tgaggggcca gtcatacagc tggctgccgg gagtcagcag
     3361 ctctccactc tctgcctgag acctgagctc tgagacctgg actcaaacaa acagaaaccc
     3421 agaatctgag gcccaacctc aaaggctagg agctaaggaa tactttaaga tgtttgttgg
     3481 tttgccatgc ttttttggct cttaagatac caagaatgat gggcttgggg ggaaattttt
     3541 tgttggtttt gtttgtttgt ttgtttgttt gtttttgaga aaaagtttga ttccagccct
     3601 tgtgtgtagc agcagcccca gcggcggctc agtagcccct ccttagcaca caggatctgc
     3661 tcatatgtga acgcctcacc tcagtgttaa ctcctgtaga tgactaatcc cgctgctccc
     3721 aggagccgct cttgctaatc gggtatacgg tatgcctttt cctcgtcaaa ctgcctaagt
     3781 cggggtttgt cctctccctg aagcattagt tcagctgaga aagctgaatg cctcagggga
     3841 ggctgggccc caagtgttta cctacttaag tgtgttctga ggtttcaggt aaatgtctgt
     3901 gattttctca ttttccttac atgaatgagt ttggttttga ttttttttta attaaatgca
     3961 aaactttttt ttttcatgtt gtgttatcaa ttaagtttgt gacaagaaag gccctaaatc
     4021 taaggatgtg agatgtcggg ctcagggaag gagcctcctt tttacttagg cctggggcct
     4081 tctgagatgc ttccagagct ttctgtggtg agcatagtac acttgggcag ctcgtccatg
     4141 tcctgggcct tgtcactgtc tgtcagaact catagacacg gagttcttgt atttgtcaac
     4201 ttgtttagct ggtttgagtt taccaaagag tgacttatcc aaaattgtct ttgacaaaaa
     4261 tatacattgc tttgattgta cagttcaggt tcaaacattg taatgggact ggtatagggc
     4321 agaaaaccga cttgagttta attgatcatg attccgcatc tgacaaattg cgcttgctcc
     4381 cattcgtgtt gctgacactt taccctctcc actgatagca gtgttaagaa tgaattctca
     4441 agccataaca cagtactgta aagttcacag ggcttcgagg gaggcagcgc ccaggccagc
     4501 acagtgctgc atagcctgtc tgcagtcacc atggggcagc agccgttcat tgtgcttagc
     4561 cacatgagaa tgtgccagga gaggcatcga ggccacctag caggcctctc tccctgaagc
     4621 gtactgtgta actccttgtg gacagcaaac ctgtccctgt acagtagtag gttaggtctc
     4681 tcactatagc tggtgcacaa gtccactaag ataaacaata tgtgaagaca tgttttacag
     4741 tgaagtatat cctgccttcc cacaggcctg tgcgtgatcg agtctcctct cagctacctt
     4801 tccatgttag acaatgtgaa gacagccaca gcgcccgccc ttccctgcga cattagtacc
     4861 attgcacaaa ctgtgaagac gttttatact tttgctaaca cttgtggttt tcaatctttg
     4921 tttgttctca tcagtactct gccctcttgt ttctactaaa gctgtaaata catttagaaa
     4981 ccatttgtaa atacagttac acagatgagt tcatcttcct ggtcagtggg aaagcctccc
     5041 cgatcaatcg gctctgccgt ggcaggtttc tctctctctc tctctctctc tctctctctc
     5101 tctctctctc tcgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgttt
     5161 gtttaaacag cagaaaggat actgtcagtt cactgttatg cagaatatac tgtaggtaga
     5221 actaaggtgg taatttttaa atctcccaga ggtctataag tgtatatgcc tcctctaatg
     5281 atggcaagtc taacctgcct ccgtgtgtgt gtgtgtgtgt gtctgtgtgt gtgtctgtgt
     5341 gtgtgtctgt gtgtgtgtct gtgtgtgtgt ctgtgtctgt gtctgtgtct gtgtctgtgt
     5401 ctgtgtgtgt tttaacagcc cggattctag ggagaatccg caagaacaca aagcaagggc
     5461 taggggacat gtccgtgtga acagactctg cctcgggctg ctgtgtttcc ctttaagctt
     5521 cccacttgtt actgctctgt ttttgtagtt accattgttc ttagattcta taatggtttc
     5581 ctgtgaagcc tccactgaaa gggactcaaa tatgcaacat ctaaactatt ttccaagggc
     5641 tcatgcccct tgaatggtgc ttctagcctg gtcagggtta tttattaaat tttatatatg
     5701 aaagtactgg ggaattatgt aaactcttta tacgagacta tctagttctt acatcataga
     5761 tttcatatac tcagtgcagc tgaactgaac gttcagagaa gtcattcact ttgttccaga
     5821 tttgtaatgg tcgtcacaca catcgtcttc agtaagtgcc agagttccca ctgttcctgc
     5881 cagggcttgc taactccagg tgcccccctg ggtctggcac agacagggct attgctgctc
     5941 ctgcttagct cctggagcaa gctttgctca ctgccctgag tggcagattg agcatacaaa
     6001 tctctcactg cccttcagtg acaagcatgc tgtgaatgcg gcctcaggac ttggagaaca
     6061 agctccaggc tgctgccctg actagagcaa gaggtaaact cacctgcctc ccctgagaac
     6121 gaccattttc ctaatgtgaa accacctctt accactttag cagtagggct aacagtcttc
     6181 tgttacaaat ggctgagcaa tgtgaatgac ttcacatggt gtcattatct tgcaatataa
     6241 actggtaacc tcaacgccac acttcatcac cacgtgaagt aaatgaagct agctaagcgg
     6301 atgctgtatc aactagtaac ttgccattaa ggttatttta tagcatgaat tgaagactat
     6361 ttattcaaat gatattttac tcatattcat tttgctttag gtttgtgaca tgaatatttc
     6421 agtgctgctt catttcgttc tgaattcttg tttcttgctt gtaaatggct tttttatggt
     6481 aataaattca atggagattg ctgtttgtaa ataaaaatgc tgctagagca a
//
