LOCUS       NM_001098667            3768 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 24
            (Zbtb24), mRNA.
ACCESSION   NM_001098667 XM_039098906 XM_345114
VERSION     NM_001098667.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3768)
  AUTHORS   Nagamachi,A., Matsui,H., Asou,H., Ozaki,Y., Aki,D., Kanai,A.,
            Takubo,K., Suda,T., Nakamura,T., Wolff,L., Honda,H. and Inaba,T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
REFERENCE   2  (bases 1 to 3768)
  AUTHORS   Edgar,A.J., Dover,S.L., Lodrick,M.N., McKay,I.J., Hughes,F.J. and
            Turner,W.
  TITLE     Bone morphogenetic protein-2 induces expression of murine zinc
            finger transcription factor ZNF450
  JOURNAL   J Cell Biochem 94 (1), 202-215 (2005)
   PUBMED   15526281
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On or before Mar 10, 2021 this sequence version replaced
            XM_039098906.1, NM_001098667.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BK001278.1, SRR26643290.55228.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000020.1  46529697-46529846
            151-1130            JAXUCZ010000020.1  46530374-46531353
            1131-1298           JAXUCZ010000020.1  46535072-46535239
            1299-1382           JAXUCZ010000020.1  46535631-46535714
            1383-1466           JAXUCZ010000020.1  46536492-46536575
            1467-1548           JAXUCZ010000020.1  46542200-46542281
            1549-3768           JAXUCZ010000020.1  46544144-46546363
FEATURES             Location/Qualifiers
     source          1..3768
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20q12"
     gene            1..3768
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /note="zinc finger and BTB domain containing 24"
                     /db_xref="GeneID:365590"
                     /db_xref="RGD:1306951"
     exon            1..150
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
     exon            151..1130
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..2314
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /note="zinc finger protein 450; bone morphogenetic
                     protein-induced factor 1"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     24"
                     /protein_id="NP_001092137.2"
                     /db_xref="GeneID:365590"
                     /db_xref="RGD:1306951"
                     /translation="MADTTPEPSGHLIVHSDTHSDTVLASLEDQRKKGFLCDITLIVE
                     NVHFRAHKALLAASSEYFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLHAS
                     EKMTEQILATAQFLKVYDLVKAYTDFQNSHNSPKPPALNCSGTPVVVISNKKNDPLKR
                     KRGRPRKTNSLQEGKSELAAEGEVQLRVNNSVQNRQNFVFKEDSVRLNEQTPKEKELE
                     PAGEPGSVEEMPAEKDENSDPKARDGPGSQSRYSKRRTRRSVKLKDYKLSGDEDDQST
                     AKRATCGRQKRSSAPEARCKDCDRVFKYSHFLAIHQRRHTGERPFKCSECGKGFAQKH
                     SLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGKYFSQKRQL
                     KSHYRVHTGHSLPECNHCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQT
                     HIRIHRGEKPYSCSICGKCFSDSSAKRRHCVLHTGKKPFSCPECSLQFARLDNLKAHL
                     KIHSKEKHASDSSSVSGSSADEVRNVLQLQPYQLSASGEQEIQLLVTDSVHNINFMPT
                     PSQGVSIVAAESSQNMATDPAANITLLTQQPEQLQGLILSAQQEQTEHIQSLGMIGSQ
                     MDTSQTEPVHVITLSKETLEHLHAHQEQTSSSVPAADTGARASSPPSTRPGAELTQAP
                     LTVPLDPSPGATVAGWPFGPSSYRSLKM"
     exon            1131..1298
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1382
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
     exon            1383..1466
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1548
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
     exon            1549..3768
                     /gene="Zbtb24"
                     /gene_synonym="Bif1a; ZNF450"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcgcgcgct tccgggctga cagtcgccgg gagccgggag cttacgcgca gtggtgccgg
       61 gggcgtggat cggcgacagg cccggcttgg tgtcctctgg gcagcccggt ggactgactg
      121 tagtaggacc ccgccggccg gccctgacag atttaaacct cttcggagtc ttctggagaa
      181 aatggcggac acaacacctg agccttctgg gcatcttatt gtacactcag acactcacag
      241 tgacactgtc ctggctagtc ttgaggatca gaggaagaag ggctttcttt gcgatattac
      301 tttgatcgtg gagaatgtgc atttccgagc tcataaagcc ctactggctg ccagtagcga
      361 gtatttctca atgatgtttg cggaagaggg cgagattggc cagtccattt atatgctgga
      421 aggcatggtt gcagacacct ttggtatcct gctggaattt atctatacag gttatctaca
      481 tgccagtgag aaaatgacag aacaaatcct ggctactgcc caattcttaa aagtctatga
      541 cctggtaaag gcttacaccg acttccagaa tagccataac tccccaaagc caccggcctt
      601 gaactgctca ggtactccgg tggtggttat ttccaataag aagaatgatc ctctgaaacg
      661 gaaacgggga aggccaagaa aaaccaacag tttgcaggaa gggaaatcgg agctagctgc
      721 agagggagag gtgcagctaa gagtgaacaa ttccgttcag aatagacaaa actttgtatt
      781 taaagaagac agtgtcagac tgaatgagca gactcccaaa gaaaaggagt tggagcctgc
      841 cggtgagcca ggcagtgtgg aggagatgcc tgccgagaag gacgagaact ctgaccccaa
      901 ggctcgggat ggaccgggaa gccagagcag gtacagcaag cggaggactc gcaggtctgt
      961 caagcttaaa gactacaaac ttagtggaga tgaagatgac cagagcacag ccaagagggc
     1021 gacgtgtggg aggcaaaagc gttccagcgc tcccgaggcc cgctgtaaag actgcgacag
     1081 agtctttaaa tatagtcact tcttagccat ccaccagaga cgccacactg gggagcgacc
     1141 cttcaaatgc agtgagtgtg gaaagggctt tgctcagaag cactccttgc aggttcacac
     1201 caggatgcac acgggggagc ggccatacac ctgcaccgtg tgcagcaagg cgctgaccac
     1261 caagcactcc ctgctggagc acatgagcct gcactcaggg cagaagtctt ttacctgtga
     1321 tcagtgtgga aagtatttca gccagaaaag acagctaaag agccattatc gtgtccatac
     1381 aggccactca ctaccagaat gcaaccactg ccatcgcaag tttatggatg tgtcccagct
     1441 aaagaaacat ctgcggacgc acacaggtga gaagccattt acttgtgaaa tctgtgggaa
     1501 atctttcaca gcaaagagct ccctccagac ccacatcaga atccaccgag gagaaaagcc
     1561 gtactcctgc agcatctgcg gcaaatgctt ctctgactcc agtgccaaga ggagacactg
     1621 cgtcttacat acgggcaaaa agcctttctc ctgccctgag tgtagcctac agtttgctcg
     1681 cctagacaat ttgaaggctc acctgaaaat ccacagcaag gagaagcacg cgtcagactc
     1741 cagcagtgtt tctggcagta gtgctgacga ggtgcggaac gttcttcagc tgcagccata
     1801 ccagctctcc gcctcaggag agcaggagat tcagcttctc gttaccgact ctgtgcataa
     1861 cattaacttc atgcccactc ccagccaggg agttagcatt gtagctgctg agagctctca
     1921 gaacatggcc acagacccgg ctgccaacat caccctgctc acacagcagc cggagcaact
     1981 gcagggcctg attctttcag ctcagcagga gcagacagag cacattcaga gcctcggcat
     2041 gattggaagc cagatggaca cctcccagac cgagccagtg catgtgatca cactgtccaa
     2101 ggaaacgctg gagcacctcc atgctcacca ggagcaaaca tccagctcag tgcctgcagc
     2161 ggacacagga gcccgagcct cctctccccc ctccactagg ccaggggcag agctgacaca
     2221 ggcacctctg actgttcccc tggacccttc ccctggagcc acagtggcgg ggtggccctt
     2281 tgggccgtcc tcttatagat ccttaaagat gtgatctgcc ccttacttat aatgggctcc
     2341 gtcagggcag agtctgtctt atctataaca tcaactcata tttggcattt aaatattgat
     2401 gagggtttcc actttgatct actatctgct cttcaggatt ggtagttttc cttcaggggc
     2461 attgatttta ttatactttt ctgtaagtgt tgaatgtcca cagccataga gtatggtctg
     2521 gtttagaacc aacagagtcg tgcctggggt gcatctttgg gtatagtggg gttatttctc
     2581 ttgggcagta tgcttgccat tcccaaacga gtcagcccta ctgtaagtga tcacggcaag
     2641 attcccctcc aggaacttac ccctaagaga gcgcctcttg gatttatctc tgtgtggtac
     2701 ggcggggcgg gctgaccgtg ttgcactgaa gctatcttgt catgctcaca aaccatactc
     2761 gcgacacaaa agccaaagta actttaaagg ttttgaatac aactttgctt caaaacgtgg
     2821 atttatacat ttttttttaa agaagcaggc tattaaattt tattttaaaa aatctccggg
     2881 gctggggatt tagctcagtg gtagagcgct tacctaggaa gcgcaaggcc ctgggttcgg
     2941 tccccagctc cgaaaaaaaa gaaccaaaaa aaaaaaaaaa aaaaatctcc aaagtatgaa
     3001 actggatcaa gatactcatt ccaaataaac caaattttgt cagataatga tacttgattt
     3061 ttatcaaaaa gaagtcttag ttacctggaa ctttaaagtt tctcagtgta ccataagtcc
     3121 taaatgcact gctgacttgt acttgagcgc agcattctga gttccgcgtc catcgtccat
     3181 cgtaggactc ctgcaggaag aactgggctc tgtctgcatg gccgtccagg ttaaccccac
     3241 tccacaccgc ttccttctga gcctcagagc gaaagcagcc gcctgcgtcc atgatggagg
     3301 gactttcaag ccaacactaa gttatgtctg ggttctgttt tcacgatcac tgcactagtt
     3361 gaattcttgg acttctcagg aagctggcgg ccttgcttga ggaaagagat agggtgctgg
     3421 gaacacggtg caggggaccg tcggtgtgaa ctcgtgtctt cacagccgtc attcttcttc
     3481 ccttcgtgta ttcccagcca aatccactat atttctgcaa attaaagaac tagacaattc
     3541 ttcacattag caagaacatt tttgttctat atgcaccgag ttgttttatt agacataatt
     3601 tataaattga ataccaagtt gtagatacgg atcggctgtg taatgtgcac tctgatctga
     3661 ctggcacaaa tgctgcttcc ctttagtaat ttagactcag tttagtcatt tgagctatgt
     3721 attcactgtg acgtgtgagc atggcttata tacaggcctt atcccctg
//
