LOCUS       NM_001401434            5876 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 21
            (Zbtb21), transcript variant 1, mRNA.
ACCESSION   NM_001401434 XM_006248166
VERSION     NM_001401434.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5876)
  AUTHORS   Bartke,T., Vermeulen,M., Xhemalce,B., Robson,S.C., Mann,M. and
            Kouzarides,T.
  TITLE     Nucleosome-interacting proteins regulated by DNA and histone
            methylation
  JOURNAL   Cell 143 (3), 470-484 (2010)
   PUBMED   21029866
REFERENCE   2  (bases 1 to 5876)
  AUTHORS   Wang,J., Kudoh,J., Takayanagi,A. and Shimizu,N.
  TITLE     Novel human BTB/POZ domain-containing zinc finger protein ZNF295 is
            directly associated with ZFP161
  JOURNAL   Biochem Biophys Res Commun 327 (2), 615-627 (2005)
   PUBMED   15629158
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Feb 11, 2022 this sequence version replaced XM_006248166.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.1617558.1,
                                           SRR26360181.2899067.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115, SAMN12840129
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-209               JAXUCZ010000011.1  50796148-50796356   c
            210-352             JAXUCZ010000011.1  50790863-50791005   c
            353-5876            JAXUCZ010000011.1  50781701-50787224   c
FEATURES             Location/Qualifiers
     source          1..5876
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..5876
                     /gene="Zbtb21"
                     /gene_synonym="Zfp295; Znf295"
                     /note="zinc finger and BTB domain containing 21"
                     /db_xref="GeneID:304056"
                     /db_xref="RGD:1310841"
     exon            1..209
                     /gene="Zbtb21"
                     /gene_synonym="Zfp295; Znf295"
                     /inference="alignment:Splign:2.1.0"
     exon            210..352
                     /gene="Zbtb21"
                     /gene_synonym="Zfp295; Znf295"
                     /inference="alignment:Splign:2.1.0"
     CDS             281..3529
                     /gene="Zbtb21"
                     /gene_synonym="Zfp295; Znf295"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger and BTB domain-containing protein 21; zinc finger
                     protein 295"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein 21
                     isoform 1"
                     /protein_id="NP_001388363.1"
                     /db_xref="GeneID:304056"
                     /db_xref="RGD:1310841"
                     /translation="MMHSVQRAHKHSGEEERRKMCACQINCRMEGLLHYINPAHAISL
                     LSALNEERLKGQLCDVLLIVGDQKFRAHKNVLAASSEYFQSLFTNKENEAQTVFQLDF
                     CEPDAFDNVLNYIYSSSLFVEKGSLAAVQELGYSLGISFLTNIVAKAPQAPFPACPNR
                     KRVPVEDDETTSQKRSVIVCQGRSEVPGKASGPAMQDLSHAARASPSGSVKTSTSKPH
                     VAKPPEQLHSLSLTEKSWTKESAAVYAKSLEQPGALDDPNRGSLVKRTTVLPPKPSQD
                     REATDDKPGVSSQLPKGKAIELALKRPRPPVLSLHSSSETPYLLKETSKGGGQGEDRN
                     LLYYSKLGLVVPSGGPASANQSIDRSGPLVKSLLRRSLSMDSQVPVYSPSLDLKSSQG
                     SSSAANEAPGSVFCAMSQKSSLKDCSEKKVLDDRPQVLQPHRLRSFSASQSTDREEAS
                     PVTEVRIKTEPSSPLSDPSDIIRVTVGGDAAAAAATRELPLKTEEDQRDMSRLPAKRR
                     FQTDRRSPLKKPKANEHGPAVSEENCEEGRSPPSLDSNFPDSDLNREEFGELEGTRPN
                     KKFKCKHCLKIFRSTAGLHRHVNMYHNPEKPYACDICHKRFHTNFKVWTHCQTQHGIV
                     KNPSPASSSHAVLDEKFQRKLIDIVREREIKKALIIKLRRSKPGFQGQSSSPAQQVIK
                     RNLRSRAKGAYICAYCGKAYRFLSQFKQHIKMHPGERPLGVSRAAKPKARAVESKEVY
                     PCRLCNAKLSSLLEQGNHERLCRNATVCPYCSLRFFSPALKQEHEDRCEYKKLTCLEC
                     MRTFKSSFSIWRHQVEVHNQNNMALAENFSMPTLDHNGEVAAASRPQTEPSKVNHVAT
                     PKEDTAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVEEAEEEAPEVSAAPR
                     EAGPSKEAGLWPCEKCGKMFTAHKQLERHQELLCSVKPFICHVCHKAFRTNFRLWSHF
                     QSHMSQATEEPVQKEPEVCPVPTNSPSPPPLPPPPPLPKIQPLEPDSPTGLPENPAPA
                     TEKLFAPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFKTAFSLWSHEQTHN"
     exon            353..5876
                     /gene="Zbtb21"
                     /gene_synonym="Zfp295; Znf295"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacgtcaa attcaagatg gatggaatca cagcggcagc ggaggctgcg ggttgcgcga
       61 gcggagtgtg agcggaaagg ggcttggcgc ctgccccagg gctgaagagc ggtgagtaac
      121 cgtcacgctc cgcgccctag gaggacgtcg ggccctgtcc gggctacggc ctctctgcaa
      181 aacgcggcct ttcctgacgt aactctgagt cacaggaatg tgaggtgcag gagaacagga
      241 agccagccaa cgagctcacc tcccatcatc agcacctctt atgatgcaca gtgtacagcg
      301 ggctcacaaa cactcgggag aggaagagag aagaaagatg tgtgcttgcc agataaactg
      361 cagaatggag ggactactgc attacatcaa cccagcacat gccatctctc tgctcagtgc
      421 cctcaatgag gagcgcctca agggacagct gtgtgacgtg ctcctgattg ttggagacca
      481 gaagttccga gctcataaga acgtcttggc tgccagcagt gagtacttcc agagtttatt
      541 cacgaataag gagaacgagg ctcagactgt ctttcagctg gacttctgtg agcctgatgc
      601 ttttgacaac gttctgaact acatttactc ttcttccctc tttgtggaga agggcagcct
      661 tgctgctgtg caggagctgg ggtatagcct tggtatctcc ttcctgacca acatcgttgc
      721 caaagcccct caggctcctt ttccagcctg tcccaacagg aaaagagtgc cagtggaaga
      781 tgatgaaacc acctctcaaa agcgaagtgt cattgtatgt cagggcagga gcgaagtgcc
      841 agggaaagcc agtggtccag ccatgcagga ccttagccat gctgcccgag cctcccccag
      901 tggttcagtc aagaccagca ccagtaagcc acatgtggcc aagccaccag agcagcttca
      961 tagtctgtcc ttaactgaaa agagctggac aaaggagagt gctgcagtct atgcaaagtc
     1021 tctggaacag cctggggctt tggatgatcc taataggggc agtttggtaa agagaactac
     1081 agtcctgccc ccaaagcctt cacaggacag agaggccaca gatgataaac caggggtgag
     1141 cagccagctt cccaagggga aagctataga actggcactg aagagaccac ggccccccgt
     1201 tctgtctctt catagctcat cagagactcc atatctctta aaagaaacta gcaaaggagg
     1261 cggtcagggg gaggatagga acttgctcta ctactctaag ctagggctgg tggtcccatc
     1321 tggtggtcct gcttctgcaa accagagcat tgacagaagt ggcccactag tgaaaagcct
     1381 cctcaggcgg tcactatcta tggacagcca ggttcctgtt tactccccct ccttagattt
     1441 gaagtcatcc cagggatcat cctcagcggc aaatgaggca ccgggcagtg tgttctgtgc
     1501 gatgtctcaa aagtcatcct taaaagattg cagtgaaaaa aaagtcctgg atgacaggcc
     1561 tcaagtgctc cagcctcatc gcctcaggtc ctttagtgct tctcagtcga cagacaggga
     1621 ggaggcctcc cctgtgactg aggtacgcat taagacggag cccagcagcc cactttcgga
     1681 cccctcagac atcatccggg tcactgtggg aggagatgca gcagcagcag ccgccacgag
     1741 agagctgccc ctcaaaacag aggaagacca gagagatatg agcagactcc cggcaaagag
     1801 aaggttccag acagacagaa ggtcaccctt gaagaagcca aaggcaaatg aacacgggcc
     1861 tgctgtctca gaagagaact gtgaagaggg caggagccct ccttcccttg acagcaactt
     1921 cccagattct gacttaaaca gagaggagtt tggtgagttg gaggggacga gaccaaacaa
     1981 aaaatttaaa tgcaaacatt gccttaagat ttttagatca accgcgggtc ttcaccgcca
     2041 tgttaacatg taccataacc ccgagaagcc ttacgcttgt gacatctgtc acaagaggtt
     2101 tcataccaac ttcaaagtgt ggacacactg tcagacccaa cacggcatag tgaagaaccc
     2161 atcgccagcc tctagttccc atgcagtttt ggatgagaaa ttccaaagaa agctgattga
     2221 catagtgaga gagagggaga ttaagaaggc cctgatcatt aagctgaggc gcagcaagcc
     2281 tggcttccag ggacagagta gctccccagc acagcaagtc atcaagagga acttgcgctc
     2341 ccgagccaaa ggggcctaca tttgtgccta ctgtggcaag gcataccgct ttctctctca
     2401 gtttaagcag cacataaaga tgcacccggg agagaggccc ctcggagtaa gcagagctgc
     2461 taagccaaaa gcacgcgcgg tagagagcaa ggaggtttac ccgtgccgcc tctgtaatgc
     2521 taagctctct tctcttctag agcaaggcaa ccacgagcgc ttgtgccgga acgccaccgt
     2581 ttgcccttac tgcagcctca ggttcttctc ccccgcgctg aagcaggaac atgaggacag
     2641 gtgtgagtac aaaaagctga cttgcctgga gtgcatgcgc accttcaagt cctccttcag
     2701 catctggcgg caccaggtgg aagtgcataa ccagaacaac atggctttag cagagaactt
     2761 ctccatgccc accctggacc acaacggtga agtggcagct gcttccaggc ctcagactga
     2821 gcccagcaag gtaaaccatg tggccactcc gaaagaggat acggcattta gcgactcttc
     2881 agaacaagtg aacttcgatt ctgaggattc ctcctgcctc cctgaagact tgagtctttc
     2941 aaagcaactg aaagtccaag tcaaagagga gcctgtggag gaggctgagg aggaggctcc
     3001 tgaggttagc gcagctccca gggaggccgg ccccagcaag gaggccggcc tatggccctg
     3061 tgagaaatgc ggaaagatgt tcacggcaca caagcagctg gagcggcacc aggagctgct
     3121 gtgttccgtg aagcccttca tctgccacgt atgccacaaa gccttccgta ccaacttccg
     3181 gctctggagt cacttccagt cccacatgtc tcaggctaca gaggagcctg tgcagaaaga
     3241 gcctgaggtg tgtcctgtgc ccacaaactc cccctcacca ccacctctgc cacctccacc
     3301 acccttgccc aagattcagc ccctggagcc cgacagcccc acaggcctgc ctgagaaccc
     3361 agccccagct acagagaagc tctttgcacc ccaggagtca gataccctat tctaccacgc
     3421 cccgcccctt tcagcaatca catttaagag acagttcatg tgcaagctct gccacaggac
     3481 attcaagacg gccttcagcc tttggagtca tgagcagaca cacaattaaa gggcctcccc
     3541 ttcacctgtc gcaaagcagc aggccctcag cttgtgaact gtgtcctaag acagaatatt
     3601 tgataaaaat aataaaggtt ggaaattttt atgtttgaat ttaagtttgg gatgaattac
     3661 tattggctag gaatgacctc acagttttct ggacctcagc agcaggggtt ggattctatt
     3721 actcttgaag ttgggttaat gttggtgatt aaggtttttg gtttctgggt agtgggatgc
     3781 tgggaagagg ttttttttgg ttttggtttt gggtttgttt ttgttttctg attattgcag
     3841 acacctaagt ttgaggtaac ccttagccat gtttttaagg ccaaaaacat acaaggaaga
     3901 agaggagtca tttgcagtat tgagtcagat tttagaatac tttagcaata agaaaagcca
     3961 agccccaact ttagtaaatt atcctgacac ttgataagaa aaataattgg tattttgtgg
     4021 tcctaggaaa ctttcttttt gtacgaaaat tgtgagaatt taaatcagca atagtcacac
     4081 ttagattttt ttataaaaga acgatctgtc aatcactcca tataatcagt gatggtcacg
     4141 tgctaaggga ggcagagtaa tagaagcaag tttgtggggt gctctacaat cggctgcaac
     4201 aggttagttg tgaaagccgc tgaactctgg tatgttctct ccatcatagc atggctttcg
     4261 actggcgctt tagaactgac aatgttctct gtcagcttga aactcaggtg gcattgagat
     4321 aagcagtgct agcatgaggt tagcagagca cagccttacc atatcctaga ccaccattca
     4381 ctccagaggc ttcaaagatt ggaggaaatg ccatgttgca gcttccatgt gttttccaag
     4441 aaccgtacac acaacataac attttctgcc tgccttttgt gaggacgtct gtgggggtat
     4501 tggaatggac accagtgaaa ttatcactac ccaatatgca aatgtgtatt aaagcactag
     4561 caagggtcca aaattagttt ttactacttg acttggtact tagggtttgg gctcctcttt
     4621 tgttttttct tgttctgttt ttgttttgtt ctatgcaggc tgtaattaaa tctctccata
     4681 ggcagaatcc aaagttcagt gaaatatttc aaaagacaaa gggaagttca cacctgggaa
     4741 ggaaattagg ggacacaaac tctctgttca ctttcgctgc aagctgtttc ttcccattta
     4801 aggtgcattc aacagagaca ccgactcatc tactcaccag cattccacac ccctgggagc
     4861 aaaggcaatc tttatattga aacttttttt ttttataaaa tactaactga ctttgtatat
     4921 tatagaagct atatgtggaa ttttgccttt tatcttttca cttgaaaaag ctatcaaaag
     4981 tccctaagta ttcctatttt atttcttaaa attcagcgaa gaagggaaat aaaatgaagt
     5041 tgcagttact aattcttgcc atctgctttc ttgaactatg cattttagag ataaactaaa
     5101 agtgtccacc atttaatgaa tgaagctagt gccgggctaa gtagctgtcc actgaactca
     5161 tttcctgtgg tgagtgaatg gtctctcctc agagtgttac tacttcttta aggccatctc
     5221 cctgcatggt catctcctgt gtagctacag agtgataacc tccaaacctg gcattgccag
     5281 ctcagtgccc caagacttga acctatgcta catttttgaa gatttataaa ataacattct
     5341 tggaaaaaaa gaaaaaaagt atttttgatc taaatacagg ctctgcatat gttaggtttt
     5401 acaaattacc agtgtttgtc accttttttt gtctaggaag aaaacataag atttcaaata
     5461 aaattttgaa ccaaaaacat ttataatgca gttgtggttt ttctattgct ttttatactg
     5521 tatcttaaaa gacatcaggc tgcaagaatt tattttgatg tcaaacacta tccttccatt
     5581 catgtaacta ttttaaatgc taagaaacaa agtaataaaa aacagtagtc actttattca
     5641 gtaaaccgtt ttttagagaa tgtttatctc agcaggcaga tgtttagtgc gaaataacta
     5701 gtctttcacc attgtaaatc tttagatagt aaagatattc ttgtaaatgt ttttctgatt
     5761 gtattaattt ttgcaagtat agagagctca ttgtttcttg taattattta agatgcctgt
     5821 ttttttatgc agttgtggaa agaatgtaaa cttttaatat attctttgtt aacatg
//
