LOCUS       NM_001012105            2795 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 17
            (Zbtb17), mRNA.
ACCESSION   NM_001012105 XM_233676
VERSION     NM_001012105.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2795)
  AUTHORS   Ivatt,R.M., Sanchez-Martinez,A., Godena,V.K., Brown,S., Ziviani,E.
            and Whitworth,A.J.
  TITLE     Genome-wide RNAi screen identifies the Parkinson disease GWAS risk
            locus SREBF1 as a regulator of mitophagy
  JOURNAL   Proc Natl Acad Sci U S A 111 (23), 8494-8499 (2014)
   PUBMED   24912190
REFERENCE   2  (bases 1 to 2795)
  AUTHORS   Wanzel,M., Russ,A.C., Kleine-Kohlbrecher,D., Colombo,E.,
            Pelicci,P.G. and Eilers,M.
  TITLE     A ribosomal protein L23-nucleophosmin circuit coordinates Mizl
            function with cell growth
  JOURNAL   Nat Cell Biol 10 (9), 1051-1061 (2008)
   PUBMED   19160485
REFERENCE   3  (bases 1 to 2795)
  AUTHORS   Alter-Koltunoff,M., Goren,S., Nousbeck,J., Feng,C.G., Sher,A.,
            Ozato,K., Azriel,A. and Levi,B.Z.
  TITLE     Innate immunity to intraphagosomal pathogens is mediated by
            interferon regulatory factor 8 (IRF-8) that stimulates the
            expression of macrophage-specific Nramp1 through antagonizing
            repression by c-Myc
  JOURNAL   J Biol Chem 283 (5), 2724-2733 (2008)
   PUBMED   18045875
  REMARK    Erratum:[J Biol Chem. 2008 Aug 8;283(32):22336]
REFERENCE   4  (bases 1 to 2795)
  AUTHORS   Adhikary,S., Peukert,K., Karsunky,H., Beuger,V., Lutz,W.,
            Elsasser,H.P., Moroy,T. and Eilers,M.
  TITLE     Miz1 is required for early embryonic development during
            gastrulation
  JOURNAL   Mol Cell Biol 23 (21), 7648-7657 (2003)
   PUBMED   14560010
REFERENCE   5  (bases 1 to 2795)
  AUTHORS   Piluso,D., Bilan,P. and Capone,J.P.
  TITLE     Host cell factor-1 interacts with and antagonizes transactivation
            by the cell cycle regulatory factor Miz-1
  JOURNAL   J Biol Chem 277 (48), 46799-46808 (2002)
   PUBMED   12244100
REFERENCE   6  (bases 1 to 2795)
  AUTHORS   Peukert,K., Staller,P., Schneider,A., Carmichael,G., Hanel,F. and
            Eilers,M.
  TITLE     An alternative pathway for gene regulation by Myc
  JOURNAL   EMBO J 16 (18), 5672-5686 (1997)
   PUBMED   9312026
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083577.1.
            
            On Feb 11, 2005 this sequence version replaced XM_233676.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083577.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132286, SAMD00132298
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2795
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /note="zinc finger and BTB domain containing 17"
                     /db_xref="GeneID:313666"
                     /db_xref="RGD:1307143"
     exon            1..168
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            169..254
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            255..461
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     CDS             257..2662
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /note="zinc finger protein 100"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     17"
                     /protein_id="NP_001012105.1"
                     /db_xref="GeneID:313666"
                     /db_xref="RGD:1307143"
                     /translation="MDFPQHSQRVLEQLNQQRQMGLLCDCTFVVDGVDFKAHKAVLAA
                     CSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLHLSPENVDDVLAVASFLQMQ
                     DIITACHTLKSLAEPTSTTGESADASAEEVCCVLSPGGDKRAKEEKAAATVLSRLDQA
                     RSSSSAGPGRELKEEWGGQAESASRGAEQTEKADAPREPPPVELKPDPTSSMAAAEAE
                     ALSESSEQEMEVEPASKGEEGQEEEGPGPATVKEEGVHLENGEPPEENEESAGTDSGH
                     ELGMEGQNLRSGTYGDRTESKAYGSIIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSC
                     RECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCGD
                     CGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCD
                     KKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCTHCQRQ
                     FADPGALQRHVRIHTGEKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFV
                     QSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRV
                     DNLRSHVKTVHQGKAGIKILEPEEGGEVSVVTVDDMVTLATEALAATAVTQLTVVPVG
                     AAVTADETEVLKAEISKAVKQVQEEDPNTHILYACDSCGDKFLDANSLAQHVRIHTAQ
                     ALVMFQTDADFYQQYGPGGAWPAGQMLQAGELVFRPRDGTEGQPTLAETPPTAPDCLP
                     PAE"
     exon            462..650
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            651..812
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            813..935
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            936..1177
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1320
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1621
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            1622..1709
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            1710..1826
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            1827..1947
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            1948..2078
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            2079..2288
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            2289..2378
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
     exon            2379..2769
                     /gene="Zbtb17"
                     /gene_synonym="Zfp100"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcggacgag cgctgcgcca gcgacggaag tcgcagccgg gaagccagcg aggtccgttc
       61 cgcccgactc taacatggcg gcgccctttg tctactgtga agcgctgccc ccggccttct
      121 cgcggccgtg atgcacctcc atctgtggtg gggttcggga catggcaggt gatgagctgg
      181 aggaagagag ccgagctgga gttctacagg cacactgtct gagaagagag cccccggctt
      241 tttggagatc tgagccatgg acttccccca gcacagccag cgtgtcttgg agcagctgaa
      301 ccagcagcgg caaatgggcc tcctctgtga ctgcaccttt gtggtggacg gcgttgactt
      361 caaagctcac aaggcggtgc tggcagcctg cagcgagtac ttcaagatgc tctttgtgga
      421 ccagaaggat gtggtgcacc tggacatcag taatgcggca ggcctggggc aggtgctgga
      481 gttcatgtac actgctaaac tgcaccttag ccctgagaac gtggatgatg ttctggctgt
      541 ggccagcttc ctccagatgc aggacattat cacagcctgc cacaccctga agtccctcgc
      601 tgagcccacc agcaccactg gggagagtgc agacgcctcg gccgaggaag tctgttgtgt
      661 tctgtctcca ggaggagaca agcgagccaa agaagagaag gctgccgcca ccgtgctgag
      721 caggctggac caagcaagaa gcagttcatc cgcaggccca ggcagagagc tcaaagagga
      781 gtggggtggt caggcagaga gtgcatccag gggcgcagaa cagacggaga aggccgacgc
      841 gccccgggag cctccacctg tggagctcaa gccggacccc acgagcagca tggctgctgc
      901 agaagcggaa gccttatcag agagctcaga gcaagaaatg gaagtggaac cagccagcaa
      961 aggagaagag ggccaagagg aagagggccc agggcctgcc acggtcaagg aagagggcgt
     1021 tcacctggag aacggggagc ctcctgagga gaatgaagag tctgcgggca cagactctgg
     1081 gcacgagctt ggcatggagg gccagaacct gcgctcgggc acctacgggg accgcactga
     1141 gtccaaggct tatggctcca tcatccacaa gtgcgaggac tgcgggaagg agttcacgca
     1201 cacagggaac ttcaaacggc acatccgcat ccacacgggt gagaagccat tctcctgtcg
     1261 ggagtgcagc aaggctttct cggaccccgc agcctgcaag gctcacgaga agacacacag
     1321 cccgttgaaa ccctatgggt gcgaggagtg cggcaagagc tacaggctca tcagcctgct
     1381 gaacctgcac aagaagaggc actcggggga ggcgcgctac cgctgcgggg actgcggcaa
     1441 gctcttcacc acttccggca acctcaagcg ccaccagctg gtacacagtg gccagaaacc
     1501 ctaccagtgc gactactgtg gccgttcatt ctccgacccc acgtccaaga tgcgccacct
     1561 ggagacccat gacactgaca aggagcacaa gtgccctcac tgtgacaaga agttcaacca
     1621 ggtggggaac ctgaaggccc acttgaagat ccacattgct gacggccctc tcaagtgccg
     1681 ggagtgcggg aagcaattca ccacctcagg gaacctcaag cggcacctgc ggatccacag
     1741 cggggagaag ccgtatgtat gcacccactg tcagcggcag tttgctgacc caggcgcgct
     1801 gcagcggcac gtacggatcc acacgggtga gaagccgtgt cagtgcgtga tatgtggcaa
     1861 ggccttcacc caagccagct ccctcatcgc ccacgtacgc cagcacacgg gggagaagcc
     1921 ctatgtctgt gaacgctgtg gcaagagatt tgtccagtca agccagttgg ccaatcacat
     1981 tcgtcaccat gacaacatcc gcccacacaa gtgcagcgtg tgtagcaagg ccttcgtgaa
     2041 tgtgggggac ctgtccaagc acattatcat ccacactgga gagaagcctt acttatgtga
     2101 caagtgtggc cgtggtttca accgggtaga caacctgcgt tctcacgtaa agaccgtgca
     2161 tcagggcaag gcgggcatca agatcctgga gccagaagag ggtggtgagg tcagcgtggt
     2221 cactgtggac gacatggtca cactggccac tgaggcactg gcagcgacag cggtcactca
     2281 gctcacagtg gtaccagtcg gggccgcagt gacagctgat gagacggagg ttctcaaagc
     2341 tgagatcagc aaagctgtca agcaagtgca ggaagaagat cccaacaccc acatcctgta
     2401 tgcgtgtgat tcctgtgggg acaagttcct ggatgccaat agcctggccc agcacgttcg
     2461 gatccacaca gcacaggcac tggtcatgtt ccagacggat gcggacttct accagcagta
     2521 cgggccaggt ggcgcgtggc cagccgggca gatgctgcag gctggagagc tggtcttccg
     2581 tcctagggat gggactgagg gccagcccac actggcagaa actccaccca cagctcctga
     2641 ttgcctacca cctgccgagt aagcaggtgg ccctctgact gtttatttaa ggatgggtgg
     2701 caccccagga ctcgaattcc ggtgctcctg ccccattccc tagagagaat aaatttgatt
     2761 attttctaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//
