LOCUS       NM_001377233            3492 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus YY2 transcription factor (Yy2), mRNA.
ACCESSION   NM_001377233 XM_008758418 XM_008773225
VERSION     NM_001377233.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Jolma,A., Yan,J., Whitington,T., Toivonen,J., Nitta,K.R.,
            Rastas,P., Morgunova,E., Enge,M., Taipale,M., Wei,G., Palin,K.,
            Vaquerizas,J.M., Vincentelli,R., Luscombe,N.M., Hughes,T.R.,
            Lemaire,P., Ukkonen,E., Kivioja,T. and Taipale,J.
  TITLE     DNA-binding specificities of human transcription factors
  JOURNAL   Cell 152 (1-2), 327-339 (2013)
   PUBMED   23332764
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Klar,M. and Bode,J.
  TITLE     Enhanceosome formation over the beta interferon promoter underlies
            a remote-control mechanism mediated by YY1 and YY2
  JOURNAL   Mol Cell Biol 25 (22), 10159-10170 (2005)
   PUBMED   16260628
REFERENCE   3  (bases 1 to 3492)
  AUTHORS   Nguyen,N., Zhang,X., Olashaw,N. and Seto,E.
  TITLE     Molecular cloning and functional characterization of the
            transcription factor YY2
  JOURNAL   J Biol Chem 279 (24), 25927-25934 (2004)
   PUBMED   15087442
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On or before Dec 18, 2019 this sequence version replaced
            XM_008773225.1, XM_008758418.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CV126814.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-723               JAXUCZ010000021.1  41253481-41254203
            724-3492            JAXUCZ010000021.1  41254335-41257103
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq21"
     gene            1..3492
                     /gene="Yy2"
                     /gene_synonym="YY-2"
                     /note="YY2 transcription factor"
                     /db_xref="GeneID:103690827"
                     /db_xref="RGD:2324567"
     exon            1..723
                     /gene="Yy2"
                     /gene_synonym="YY-2"
                     /inference="alignment:Splign:2.1.0"
     exon            724..3492
                     /gene="Yy2"
                     /gene_synonym="YY-2"
                     /inference="alignment:Splign:2.1.0"
     CDS             772..1902
                     /gene="Yy2"
                     /gene_synonym="YY-2"
                     /note="Yin and yang 2; Transcription factor YY2-like"
                     /codon_start=1
                     /product="transcription factor YY2"
                     /protein_id="NP_001364162.1"
                     /db_xref="GeneID:103690827"
                     /db_xref="RGD:2324567"
                     /translation="MASDTEKLMCLTTENAEIPADFVELQPLDEIETVSLETNVSQTI
                     EVYGDVGVDWAHGGHYHSPLIALQPLAGSNLSNGDHDQEMIIVQTREEVVDYQDSDNL
                     LLGTEFESQMVLPVNEDDYLQPTTATFSGFMAAENGQDELSPYGGNLCGLTTIIEAGA
                     EEGVNPDLGDKQWEQKQIQIDGLDGEFPFAMWEDNNLKEDPVAEEEAGESTPDYSEYM
                     TGKKFPPEGIPGIDLSDPKQLAEFTSMKPKKPKGDFPRPVACSHKGCGKMFKDNSAMR
                     KHLHIHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPYQCTFEGCGRRFSLDFNLRT
                     HVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTHVKNKNDQ"
ORIGIN      
        1 tgcaataaag cacaaaatat ggtatatttc aaggcaaggg agaattaata ttggaaattt
       61 ttgaaaaaaa agtttatttt caggaaattt tccttatcta acatgttaag actaaaaact
      121 aacatatatt aatattttaa aaactatact taagtatgta ttgtgattaa gtaaggggaa
      181 agaaacaatt ataatgggct tgacaatatg tagctcagtg gtagaatatt tgtatactat
      241 tcagacacaa agtataaaat ttaaaggaaa tagactttct ttttttccta gatctgacat
      301 aaagtataaa atttaaaagg aatagacttt cttttttcct agatctgaca taagcctggc
      361 tgagggtagg taagaaatca acttaagtaa aatatagaaa attctagaaa acctagatgg
      421 gaaacttctc cagtcagtca gtaactggac tggagaaacc cagcgaaggt tctgcaactc
      481 gtgcaggaag ttccgcaatc atgtaggcat gcgcaaaaga agctttcttg attggtctgt
      541 cgcagtttag tgacgcatcc agtggcgtat ccagtggcat gcccagtgaa atgtccagtg
      601 acacgcccaa cgcatgcgtc ttgtcctccg gaaacaccta taagcgtctc cggaaacgcc
      661 ttagtgtctc agacgacggc ctgcttttct cagaagcgca cggttttcgt cacgctctct
      721 cggctgtctc ccacctgctt gctacccagg accggtacgc aggtctccgc catggcctca
      781 gatacagaga aacttatgtg tctcaccaca gaaaacgcag agattcccgc tgattttgtg
      841 gagctgcagc cgctcgatga aatcgagacg gtttctttgg aaaccaatgt aagccaaacc
      901 atcgaagtgt atggagatgt aggtgttgat tgggcgcatg gtggccacta ccactctcct
      961 cttattgctc tgcagccact tgcgggcagc aacctgagta atggagatca tgatcaggaa
     1021 atgattatcg tgcagacacg agaggaggtg gtggactacc aagactcaga caacctacta
     1081 ctcggtactg aatttgaaag ccagatggtt ttgccagtta atgaagacga ctatctccag
     1141 ccgaccactg ccactttttc tggcttcatg gcggcagaga atggtcaaga tgagctcagc
     1201 ccctatggag ggaatctctg tggtttgacg accattatcg aggccggtgc agaagaaggc
     1261 gtgaaccctg acctgggtga caaacagtgg gagcagaagc agatacaaat cgatggtctt
     1321 gatggagaat ttcccttcgc catgtgggag gataataatt taaaagaaga tcccgtggct
     1381 gaagaagagg ctggtgagtc aacccccgat tattctgagt atatgacagg aaagaaattt
     1441 cctcctgaag gaatacctgg catcgatctt tctgatccca aacaactggc agaatttact
     1501 agcatgaaac ccaaaaagcc aaaaggagac tttccaagac cggtagcatg ctctcataaa
     1561 ggctgtggga agatgttcaa agataattct gctatgagaa agcacctgca catccatggg
     1621 cctagagtac atgtctgtgc agaatgtggc aaagcttttg ttgagagttc gaagctgaaa
     1681 cgtcatcagc tggttcacac tggagagaag ccctaccagt gtacctttga aggctgtggg
     1741 agacgctttt ccctcgattt caatttgcgc acacatgtgc gaatccatac tggagacaaa
     1801 ccttttgtgt gcccatttga tgcctgcaac aagaagtttg cccagtcgac aaacctgaaa
     1861 tcgcatatct taacacatgt aaagaacaag aatgaccagt aaaaagaagt cagaagatcc
     1921 ttttgaagcc tgggaagtat tttacagtaa tgtgcctggg aataatatga cccttgtttg
     1981 aacagtttct aggaaagtta ttgcaaatga attatgcata tctgaggttt atgttttgat
     2041 agagcaaaag ttaagttaaa agttttatgt tgataagatg ctgtatttta tactatagtg
     2101 gtgttttggg ggaatttcgt ttcaacaggg aactaattca caagcctcat attgctaaag
     2161 ttggcctgag ttctttttaa gctggagttt tttgagatac atggtttcaa caagagacta
     2221 aactatgaac ctcatattcc taagatactc tatcttctac agtggtaatt ttatgaaact
     2281 tggtttcaac aagagactat ttcaagaact agatatccca agatgacctg ttttattctg
     2341 cagtggtatt ttatgaaact tgcttttgat ggactaattt atgaaccaca ttgtttctaa
     2401 aaatgatctg tgctattttg cactgaagtt tgagatttca acaggagact aaattacaag
     2461 ccctgttgtt cctagatgtt ctatgttatt ctgcgaagtg actttttgtg aagtttggtt
     2521 tcaacagggg actaaatcac aaacttcata ttgctcaggt atcctatctt ctgcaatggt
     2581 gtttttttga agtttggttt caacaagaga caatttcacg aacttcatat gttaaaatgg
     2641 tatttttatg aaacttgctt tcaacaaact tcattttcct aaagtgccct gtattactct
     2701 gcagtagtgt tattgtaaag ttgattttta catgagaaga actcatgaat ctcaaaacgt
     2761 aatgttgcta atatgctctg ttttactctg tagtggtgtt ttttgaagtt tggtttcaac
     2821 aggagactta attcatgagc tccatatttt tgttaagatg tcctgtctta ctttgcaatg
     2881 tttttttttt ctgtgaaata tggttttgac aggagaataa ttcatgaaat tcatgtcaaa
     2941 ttacatttct ttatacaact ttgtgaaaat gggactttgc attctcataa atatgaagtt
     3001 tactatgttt taaaattgtg tgttcttttt ttaaaattgt gtgttctaac tgctcatgtt
     3061 tatactttta ggaatatgtt tagtaattat atatctgatt tctgtggagt tggtgtttat
     3121 aagtctttaa agaattgaca gttttatgcg ttcatataat tctgataaag aaactttata
     3181 ggtttgtttg ctgtcttaag tttggcagta ttctttgata ccaagacatt ttgtataagt
     3241 ttcttttatc tgtattatac agtatagaac gttagatgac ataattttat tagccagttt
     3301 aaacaccttt tagttatttt attctatccc ctaaaaatac tatttagagt gctgttgtgg
     3361 agtgtaattt ctttaattaa ttaagagtag tgcttgatta cataaaacct tatcttctaa
     3421 ttgattgcat gtttgatata tacttttgtg ttatagaaaa agcaaaaata aaactgtttg
     3481 aagaattaaa aa
//
