LOCUS       NM_175604               1541 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus yrdC N(6)-threonylcarbamoyltransferase domain
            containing (Yrdc), mRNA.
ACCESSION   NM_175604
VERSION     NM_175604.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Lai,E., Wilson,R.K. and Hood,L.E.
  TITLE     Physical maps of the mouse and human immunoglobulin-like loci
  JOURNAL   Adv Immunol 46, 1-59 (1989)
   PUBMED   2675563
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC099797.1.
            
            On Oct 3, 2005 this sequence version replaced NM_175604.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099797.1, BC088428.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1541              BC099797.1         1-1541
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1541
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /note="yrdC N(6)-threonylcarbamoyltransferase domain
                     containing"
                     /db_xref="GeneID:319113"
                     /db_xref="RGD:708492"
     exon            1..405
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..856
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /EC_number="2.7.7.87"
                     /note="yrdC domain-containing protein, mitochondrial;
                     ischemia/reperfusion-inducible protein homolog; BmTCTP
                     receptor; ischemia/reperfusion inducible protein; yrdC
                     domain containing; threonylcarbamoyl-AMP synthase"
                     /codon_start=1
                     /product="threonylcarbamoyl-AMP synthase precursor"
                     /protein_id="NP_783194.2"
                     /db_xref="GeneID:319113"
                     /db_xref="RGD:708492"
                     /translation="MSTARPCAGLRAAVAAGMGLSDGPAGSSRGCRLLRPPAPAPALP
                     GARLLRLPESEAVEAASPERSGWTEALRAAVAELRAGAVVAVPTDTLYGLACSASCSA
                     ALSCVYRLKGRSEAKPLAVCLGRVADVYRYCQVRVPRELLEDLFPGPVTLVMERSEEL
                     NKDLNPFTPLVGIRIPDHAFMLDLAQMFGGPLALTSANLSSQASSLSVEEFQDLWPHL
                     SLVIDGGPIGDSESPECRLGSTVVDLSVPGKFGIIRSGCALENTTAILQGKYGLLPSQ
                     GSCS"
     exon            406..520
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /inference="alignment:Splign:2.1.0"
     exon            521..640
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /inference="alignment:Splign:2.1.0"
     exon            641..783
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /inference="alignment:Splign:2.1.0"
     exon            784..1528
                     /gene="Yrdc"
                     /gene_synonym="Isrip"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgagtctgga cggatgtcta ctgcgcgtcc gtgtgcgggg ctgagggccg ctgtggcggc
       61 cggcatgggg ctgagcgatg ggccagcggg ctctagccgc ggctgccgcc ttctacgccc
      121 tcccgcgccc gctccggcgc ttccaggggc ccggctgctg cggcttccgg agagcgaggc
      181 cgtggaggcc gcaagccccg agcgctccgg ttggaccgag gcgctgcggg ccgccgtggc
      241 cgagctgcgc gctggcgccg tggtggcggt cccaactgac acgctgtacg gtctggcctg
      301 ttcggcgagc tgctcggcgg ctctgagctg tgtgtatcgc ctcaagggcc gcagtgaggc
      361 caagccgctg gccgtgtgcc tgggccgcgt ggccgacgtc tacaggtact gtcaggtgag
      421 agtacctagg gagctcctgg aagacctgtt cccaggacct gtgaccctgg tgatggaacg
      481 ctcagaggag ctcaacaaag acctcaaccc ctttactcct ctcgttggca tccgaattcc
      541 tgaccatgcc tttatgctgg acttggccca aatgtttggg ggaccacttg cactcacgag
      601 tgccaacctc agctcccagg ccagttctct gagtgttgag gagttccaag acctctggcc
      661 tcatttgtcc cttgtcattg atggggggcc aattggggat agtgaaagcc ctgagtgtcg
      721 tcttggctct actgtggttg acttgtctgt gcctggaaag tttggcatta ttcgctcagg
      781 ctgtgccctg gaaaatacta cagccatcct ccaggggaaa tatgggctgc tcccttcaca
      841 ggggtcctgt tcatgaaact tgggaggacc caagaaccat gctggatact atgtgtctac
      901 tacaggttgg caaagcctca ttggctgagg ttcctggagc tacatctgta gcctagcttt
      961 ttaggcagtg tccttggctc tgaatcctgt aggccagcca gaagcttcgg gttgagcctt
     1021 gcacccaggg gaaggttata tttactctgt agattcatgt gtcaaccgag aatggaggga
     1081 agaacattct tagagtgacc ttattatttt aagtgcccct ctcaccccag ccctgcctat
     1141 aagttaagta acttgactgc agaattagaa tgcattaaga gctgctttct ggtgaacagt
     1201 gaaatttggt ttcaaaccag ccagaagcac taatgcagtc tagaagtctc aggaccaatg
     1261 cagcaaagtc taggagccct ggccagagct ttctgggtac aggagagtgg tcatttggag
     1321 aaaattattc taggagttcc aaatgaaata atattgaaaa ataaaatctt gactgttttc
     1381 agccagtgac tttcttattt attggtatag ttctctgttt aatttattta actcagaagt
     1441 catctttgtt catatgtcta cctggtattt acataattat ttttaagtat ttgaactgta
     1501 tttctttatt aaatatttct tctacaaaaa aaaaaaaaaa a
//
