LOCUS       NM_001024369            1625 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus yippee-like 4 (Ypel4), mRNA.
ACCESSION   NM_001024369 XM_578138
VERSION     NM_001024369.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083749.1.
            
            On May 27, 2005 this sequence version replaced XM_578138.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083749.1, CO402835.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132265
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..1625
                     /gene="Ypel4"
                     /note="yippee-like 4"
                     /db_xref="GeneID:502643"
                     /db_xref="RGD:1560142"
     exon            1..175
                     /gene="Ypel4"
                     /inference="alignment:Splign:2.1.0"
     exon            176..500
                     /gene="Ypel4"
                     /inference="alignment:Splign:2.1.0"
     CDS             360..743
                     /gene="Ypel4"
                     /codon_start=1
                     /product="protein yippee-like 4"
                     /protein_id="NP_001019540.1"
                     /db_xref="GeneID:502643"
                     /db_xref="RGD:1560142"
                     /translation="MPSCDPGPAPACLPTKTFRSYLPRCHRTYSCVHCRAHLAKHDEL
                     ISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAF
                     ETSQKYKEGKYIIEMSHMVKDNGWD"
     exon            501..544
                     /gene="Ypel4"
                     /inference="alignment:Splign:2.1.0"
     exon            545..653
                     /gene="Ypel4"
                     /inference="alignment:Splign:2.1.0"
     exon            654..1595
                     /gene="Ypel4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcaaaaggca acctctgccc cagcagctgt ccagcctgca gtcccagacc tcagcccccc
       61 aactaccctc ccccaacccc atccccttcc caattgaagg agccaacaga gaagagagaa
      121 gagtgaacag agagattgag agagatagac ggagatctct ggagcagacc tcaaggtgat
      181 ttccatttct atctggttct cgtctggggg ggccctggca gggcagcccc cccacacttc
      241 tactgtcctg aaacacggct ctagccaatc tgctccgctg ctttacctgc gaccgtctct
      301 gtgggggctg caccgcacca gcccctccag cccgccaggg catcgtcctc caaccggtca
      361 tgcccagctg tgaccctggc ccggcccctg catgtttacc caccaagact ttccgcagct
      421 acctgccccg ctgccaccgc acatacagtt gcgtccactg tcgagcacac ttggccaaac
      481 atgatgagct tatttccaag tctttccaag gaagccatgg ccgggcctac ctgtttaact
      541 ccgtggtcaa cgtgggttgt gggccagctg aacagcgcct cctgctcaca ggactccact
      601 cggtagctga cattttctgt gaaagctgca agactacact gggctggaaa tatgaacaag
      661 cttttgagac cagccagaaa tacaaagaag ggaagtacat cattgagatg tcacacatgg
      721 tgaaagacaa cggctgggac tgaggggctc agcagtctgt gaccctcctc cgcatgcccc
      781 accctcctca taccagtccc cggccctgct gagcagtcca caccagcatg agtactgccc
      841 acccctgggg aaactcggtt ccaagtgacc acctcctccc tcccccgtca cagcagtacc
      901 aggttctttg gaacaggagc ctgggatacc ccaggggtgg ttaaggttca ggagtgggta
      961 gcagtcaggg aaatacagaa caggggaagg agataattat ggcaccagaa accaagtgat
     1021 ggcagggcgt gaactcaggc agaaaggact acgaattacc aaatgttgat cagcctttct
     1081 tgaatgaata ggacaaacat tggtggtggg gctagactac agaagagcaa agatggagtg
     1141 aaattttggt ctcagatatc agggccccag agtctgaggg tagtttatcc acccccattc
     1201 atggtgaaaa aggaccaggg atggggccaa tagaaggaaa aacacaaacc ctaggccctg
     1261 ggaatcagtt acaagggttt ccatttcact ccactgttta ccttggcact aaagaggcac
     1321 tttcaaatat ctaatctttg ccactgggtg gggtgggaaa agctgctccg agaacagccc
     1381 ctacccccag ctggctgttg ccagagagag cagtctttac aggcgttccc caaggctcag
     1441 ccaccgctcc ctgggaccca gtcctctgga ggaggcggat catcagcgct gaggggacca
     1501 gtctttcctg tgactgccac cagcgaacga aatttttgta tgatacataa agtgtttggg
     1561 tctattttta ataaaaaggg gaaaagcaac tgtgaaaaaa aaaaaaaaaa aaaaaaaaaa
     1621 aaaaa
//
