LOCUS       XM_008768928            3222 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus yippee-like 1 (Ypel1), transcript
            variant X2, mRNA.
ACCESSION   XM_008768928
VERSION     XM_008768928.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008768928.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008768928.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3222
                     /gene="Ypel1"
                     /note="yippee-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 ESTs, 14 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 26 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100360867"
                     /db_xref="RGD:2321291"
     CDS             379..735
                     /gene="Ypel1"
                     /codon_start=1
                     /product="protein yippee-like 1"
                     /protein_id="XP_008767150.1"
                     /db_xref="GeneID:100360867"
                     /db_xref="RGD:2321291"
                     /translation="MVKMTKSKTFQAYLPHCHRTYSCIHCRAHLANHDELISKSFQGS
                     QGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKE
                     GKFIIELAHMIKDNGW"
ORIGIN      
        1 atggcggctg ggccgggcta cggctccaaa acaaagggta ggcggcccgc gaggcggcgg
       61 caggaggatg cctcgcgccg ggacagggcg ccaacggccg gagcgcgtcc ccggtcctac
      121 taggaccgct tgaaaactga gcccgcgctg accgagcctg ggccggatgg gcgcagcgga
      181 ccctgccgcg gaccgccgag cggccgtgag tacgggttgc actggctttc tcttgtccca
      241 gtgtgtggac cgcaccacac gccctcctga ccagcaacgg ctcttgcgca tgcttttcgg
      301 tgtttttatc ggagagtccg gcagagccct agctcctcca gagctggccc agaaccgagt
      361 gacaagtgcc cagcagacat ggtaaaaatg accaagtcca aaactttcca agcttatctg
      421 ccacactgtc acagaactta cagctgcatc cactgcagag cccatctggc caatcacgat
      481 gagctcatct ccaagtcctt tcagggaagc caggggcgag cctacctctt caactctgtg
      541 gtgaatgtgg gctgcggccc cgctgaggag agagtccttc taactgggct gcatgcagtg
      601 gccgacatct actgtgagaa ctgcaagacc acactcgggt ggaaatatga acatgccttt
      661 gagagcagtc agaaatacaa ggaaggaaaa tttattattg aacttgccca catgatcaaa
      721 gataacggct ggtaacgtga agcggtctgc tccggtctga atactacttt aggaagctga
      781 gtggaaagaa gatctgactt cttggtgaca gtgctccttg aacttaccct cacaggctag
      841 cccagtctca acacttgaag ggggctctct aggctgtcca cttggtaagg tgccccatct
      901 gaatcccctt gatgtactcc tggaagtttg cattcttttt ctaacttaag ttctagagga
      961 agaattgacc agctggtgac tcccctgcct agtgagtact ttcttaccct ccgcctgcaa
     1021 catcttctgg ctgtttttta ccaaacccaa gtccctaaaa gcacagaagc agggtctctc
     1081 ccgagcaaag acacagtggc cagaagtagt cagcaaattt acatgcgaag catgtctctt
     1141 aaaaaactga aaccagccgc tggtaagacg gtagagaagc taaaaaagta agcatccggt
     1201 gtgcatctta gggaataggg agcttcctga tgtagaaggc aagtgacttg accagtggct
     1261 gaacactctg ttccaggcct cctggagttt gccacagagc tgcggcagca cagaggctcg
     1321 tgcagggctg gtccctgcga cagagcagca ggctaggatt cactttctac cctggatgta
     1381 cttgaaatag ttatgcatac agaggccaga gccagtaggg aaaactgtac aacctgagag
     1441 ttttccatga tgaaggaaga gttagcttag tatgggagct acctttcctg cctggaatca
     1501 cctcacagcc tgacagggag aacctggcca tcccttaagc ctgggctctc agattttccg
     1561 tcacaaccca tcttccccca tgcatcccta aggagtggcc aatttgcaga gaggatggag
     1621 ggcagagcca ttcccagata gttttattgt tttataccct acccagggag agcagaaagg
     1681 caggaagaag gcctatgcag gctgagagcc cttgagccat gaaggcagca tgaaaggaaa
     1741 gcgcttagca ccagctgctc tagagctgcc tgaggtcctt tgggctccag ccccaaaccc
     1801 tctcagccca gatcatctgg ccagcagagg caggcagtct actccagctc gcttcaaagc
     1861 ctacattttg gtaccatttc tttgcccaag attcgaagct aggtgataca agagataccc
     1921 ggggaattag atgacgctgg cacggtctgt gggcctctag gcccggccct agcccaagct
     1981 gctttcttcc caacaatttg ttttcctcca gactaaggct gacccatagt aaagtcactc
     2041 cacctagtaa ggtaagtgct gagtatcagc aaggcagcga tgtgaccctg gccaggctcc
     2101 atgccatcca tatctaggaa tgaacactag tcaacagtca gctcagagtg gacatgccag
     2161 ccgggctagt ttctaatcct tctgaaagtg gggacttggt ggccgaggcg tgggagacct
     2221 gatgtcaacg gtgggaagaa aggcaagggt aacctgagta taatcctatc tgtgcttcac
     2281 ttaggccgaa gaatcttgga gaattcttct caccaggttt tgtatatact aagattatat
     2341 ttacagactt tttatgtcct gggcatgcta cctgccctcc cttcatctga gcactttgta
     2401 ttgtcttttg tgagaacact gaccagagcc tttttgctgt actctttatg acttacctgt
     2461 attgggagtg acagacacaa aaaggtttat caagtttttt tggattttgt gttggccttc
     2521 tgtgaaatat aaactttttt aaaccaaaag aactgaccgt gagctggctt caggttaaga
     2581 gttgcaagac cacaaccagg tgtgcttgcc cagctcccct cccatttcta aacagtgtcg
     2641 ctctgggact attctaaaaa tgttatcgtc agaacggaag gtgataccag gtcataaagg
     2701 ccactttgct ttagaatgtg gtgtattttg ttgctgtctt gttagtgtgt gtgtgtatat
     2761 atatatatat acatatatat atatatatat acatatacat atatatatat atatagtatt
     2821 tttatacctt aacgcttatt cttgatggca tctgtcaggt atttgaaaag atcagatttt
     2881 ttttcctcag aaaaatcctt tattttctga tgacctcatc aggcggtttt caaaatccat
     2941 gtgtctttac tgtctaaaaa actactattt aagctgtaga caagtaaccc atggacatgc
     3001 gagccctggt aggctgtcct ctgtgcccct tgggacagtt gtaggctgct aagcaaggtc
     3061 gactgcacgg tgatatggaa acagcaggag ttcaccatga gcagcgggag ccaagctcaa
     3121 gcatacagag cccttggcct ccctgtctcc tagccaaagc tgtcagccct tggtgccatg
     3181 tctgtgtgag gtataaaaat aaagcctgtt gtcaaacggc aa
//
