LOCUS       NM_001037644            1590 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus YJU2 splicing factor homolog B (Yju2b), mRNA.
ACCESSION   NM_001037644 XM_222461
VERSION     NM_001037644.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Lammers,R., Gross,G., Mayr,U. and Collins,J.
  TITLE     Alternative mechanisms for gene activation induced by
            poly(rI).poly(rC) and Newcastle disease virus
  JOURNAL   Eur J Biochem 178 (1), 93-99 (1988)
   PUBMED   3203696
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC107912.1.
            
            On Dec 9, 2005 this sequence version replaced XM_222461.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC107912.1, SRR8487226.58039.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..1590
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /note="YJU2 splicing factor homolog B"
                     /db_xref="GeneID:304656"
                     /db_xref="RGD:1307598"
     exon            1..218
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     CDS             216..1373
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /note="coiled-coil domain-containing protein 130;
                     coiled-coil domain containing 130"
                     /codon_start=1
                     /product="probable splicing factor YJU2B"
                     /protein_id="NP_001032733.1"
                     /db_xref="GeneID:304656"
                     /db_xref="RGD:1307598"
                     /translation="MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGIL
                     IIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQT
                     DPANCDYVIVSGASRKEERWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLK
                     KALPTLSHIQEAQNAWKDDFALNSMLRRHFREKKKAMQEEEEKDQALQAKANLAIPLV
                     PESEDDRRLAALLRLHTLDSYEDKQRMKRTEIIHRSWFPSAQGPSTSSSKASTVLKKL
                     CRGRRPPTGSAGAPGDLGIVRRKSREAPESPQCTADNSLSEEPRGPPGTTPDSKTLQG
                     TAEAPRTSKTLESKRNCSDQALPLGSSQEDLLHPNTPNASLVADYSDSESE"
     exon            219..272
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            273..355
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            356..411
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            412..472
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            473..615
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            616..788
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            789..927
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
     exon            928..1555
                     /gene="Yju2b"
                     /gene_synonym="Ccdc130; RGD1307598"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttggctacc cctgcactct gtggaggctc agcgtcaggt tgcaactcag aactcctgtg
       61 aactccaaga accagaagat ccaggccaca gagccccatc ttcacagcct ccgcagcccc
      121 cgcagcctcc aaagggcact cctcactgca tgtgctcgcc aggctgattt cacagttgga
      181 gccttgctag taagacccta caggcagttc ccaagatggg ggaaaggaaa ggccagaaca
      241 agtactaccc tccggacttc aaccccgaaa agcatggctc tctcaaccga taccacaaca
      301 gccacccact tcgagaacgg gctcggaagc tctcacaagg catccttatt atccgatttg
      361 aaatgccata caacatctgg tgtgacggct gtaagaacca catcggcatg ggtgtgcgct
      421 acaatgcaga aaagaagaag gttggcaatt actacacgac tccgatctac aggttccgga
      481 tgaaatgcca cctctgtgtc aactacatcg agatgcaaac agaccctgcc aactgtgact
      541 atgtcatcgt gagtggtgcc agtcgcaagg aggagcgttg ggatatggaa gacaatgagc
      601 aggtgctgac cacagagcat gagaagaaag agaaactgga gacagatgcc atgttccgcc
      661 tagagcatgg tgaggctgac cgcagcacgc taaagaaggc ccttcccacc ctcagccaca
      721 tccaggaggc acagaatgcc tggaaggatg actttgctct gaatagcatg ctacggaggc
      781 acttccggga gaaaaagaaa gccatgcagg aggaggaaga gaaggaccag gccctgcagg
      841 cgaaggccaa cctagccatc cctcttgtgc cagagtcgga ggatgaccgc aggctggctg
      901 ccctgctaag gttgcacacc ctggactctt atgaggacaa acagagaatg aagcggacag
      961 agatcatcca ccgatcatgg ttcccctcag cccagggacc cagcactagc agcagcaaag
     1021 ctagcactgt cctgaagaag ctgtgccggg gccgcagacc acccaccggc agcgcagggg
     1081 caccggggga cctgggcata gtgaggagaa agtctcgaga agctccagaa agtccccagt
     1141 gtacagcgga caactccttg tcagaagaac caagaggacc acccggaacc accccagaca
     1201 gcaagacact tcaagggaca gcagaggcac ccagaaccag caagacacta gaatctaaga
     1261 gaaactgtag tgatcaagcc ttacccctag gttcctccca ggaggacctg ctgcacccca
     1321 acacccccaa cgcctccctg gtggctgact actctgactc agagagtgag taagggagtc
     1381 agaactccag gactaaaagc catgacttgt ccagacccta gggactggct gcattgctgc
     1441 cagcccagcc ataaacttat cttcctatac agattattat ttatttggtt ttggtgagga
     1501 tgtctgtgcc ttgatgtaac ccttgatacc tgaacattaa agttctctgt ccctgaaaaa
     1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
