LOCUS       NM_001014208            1977 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus Yip1 domain family, member 2 (Yipf2), mRNA.
ACCESSION   NM_001014208 XM_343357
VERSION     NM_001014208.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Soonthornsit,J., Sakai,N., Sasaki,Y., Watanabe,R., Osako,S. and
            Nakamura,N.
  TITLE     YIPF1, YIPF2, and YIPF6 are medial-/trans-Golgi and trans-Golgi
            network-localized Yip domain family proteins, which play a role in
            the Golgi reassembly and glycan synthesis
  JOURNAL   Exp Cell Res 353 (2), 100-108 (2017)
   PUBMED   28286305
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083587.1.
            
            On Apr 20, 2005 this sequence version replaced XM_343357.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083587.1, SRR8487231.172642.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..1977
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /note="Yip1 domain family, member 2"
                     /db_xref="GeneID:363027"
                     /db_xref="RGD:1307512"
     exon            1..81
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            82..142
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..1047
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /note="YIP1 family member 2"
                     /codon_start=1
                     /product="protein YIPF2"
                     /protein_id="NP_001014230.1"
                     /db_xref="GeneID:363027"
                     /db_xref="RGD:1307512"
                     /translation="MAAADDLAFHEFEEAANLLAETPDAATTSQSDKLTSQEHVAVVV
                     GSGIGYGAEGEEEDDKTSLLQDEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHP
                     GHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTI
                     AGITIYCYAWLVPLALWGFLRWRQGTRERMGLYTFLETVCVYGYSLFVFIPTVVLWLI
                     PVQWLQWLFGALALALSAAGLVFTLWPVVREDTRLVAAALLSIVVLLHALLALGCKLY
                     FFQPLPLDHVVPAPQAIPPSPNVLLPSSVQPMTTF"
     exon            143..297
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            298..378
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            379..466
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            467..583
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            584..750
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            751..933
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1059
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
     exon            1060..1946
                     /gene="Yipf2"
                     /gene_synonym="RGD1307512"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgagaagggt gggctctgac gggtaggcga gcggcgcgca cgcgcacgga gcaagagcca
       61 cgccagctta ggtagcttca gagtgtgatg cagtgacgcc tccaaagaac catggcagca
      121 gccgacgatc tggccttcca cgagttcgag gaagctgcaa atcttctggc agaaacccca
      181 gatgcagcaa ccacgagcca aagtgataag ctgacctcac aagagcatgt ggctgtggtt
      241 gtgggttcag gcattggcta tggagccgaa ggagaggaag aggatgacaa aacatcactt
      301 ctacaggatg aaaagccaca gccaagattc tggacgtttg actactatca gagctttttt
      361 gatgtagaca cctcccaggt cttggacagg atcaaaggtt ccctgctgcc ccatcctggc
      421 cacaactttg tgcgtcacca tcttagaaat cgtcctgact tatatggccc cttctggatt
      481 tgtgccaccc tggccttcgt cctggcggtt actggcaatc tcactttggt gcttgcacag
      541 agacgggacc cctccattca ctatagcccc cagttccaca aggtgactat agcaggcata
      601 accatctact gctatgcgtg gctagtgccg ctggcactgt ggggctttct ccggtggcgc
      661 cagggcacga gggaacgcat ggggctgtac accttcctgg agactgtgtg tgtctacggc
      721 tactcactct ttgtcttcat cccaactgtg gtcctgtggc ttatcccagt gcagtggctc
      781 cagtggctct ttggagccct ggccctagcc ctgtcagctg ctgggctggt gttcacactg
      841 tggcctgttg tccgagagga tacacggctg gtggccgcgg cactactgtc tattgtggtg
      901 ctgcttcacg ccctcttggc tctaggctgt aagctctact tcttccagcc tctgcctctg
      961 gaccatgtgg taccagcacc ccaagccata cctccatctc ccaacgtcct gctgcccagt
     1021 tcagtccagc ctatgacgac cttctaagaa ggcccacagg ccaaactcaa tggggagact
     1081 actgccctcc gatgaagatt ggaggattct tggaccctgg agacttcctg ctattttgca
     1141 ggcttttctt acaaagcaaa cacttttatt ttctatgcaa aggtgatcca gagaatttat
     1201 ataaaggtgg ggaggggcag ccaagcaggg agtattactg atggacagga gagagcctgg
     1261 tttcccagtc gcctgagggc cctttgattc cctgacaggt caggagggtg gcacagagca
     1321 gctccagcct ttgccagagg gtacctgtgg tgggcaggag cccagcttga gctgtggcca
     1381 ttaaggtggg gactctaggg caaggggaca ggggaagaga ctggaaactg cctgtgctta
     1441 ttagtcaccc ttccttgttt gcttttattt tcgtctgggg agaggtccct gctaggcccc
     1501 ttcccaggga tgctgtcttg agaggagttg agtggaacat gaatgtggag ggaacacaca
     1561 ggcctatgct agctatcagg acagaatgcc ttccttgtga tagatctttg aggtctcttg
     1621 tttgccacag tagcccaggg ttactcactc tgagctgcct gttccagctt ttgacggagg
     1681 ggaccttcaa ggctcaggac aggacagtag cagaaagcag gggctaggcc tttggacagc
     1741 tgggtggttt gtacattcaa gtttgaggtg aaccctttgg tgggaggggg cttcgcccac
     1801 cctgaaggct cggcagggcc acccctcacc tagaacctct gggcctaggg acagggctgc
     1861 tggcttggcc cggccagccg ggtttctcag agggtctgtg ggttgacact ggttcttttc
     1921 gtaaaaaaat aaaattaaaa aaagcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
