LOCUS       NM_199383               1428 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Rattus norvegicus Yip1 domain family, member 1 (Yipf1), mRNA.
ACCESSION   NM_199383 XM_216449
VERSION     NM_199383.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Soonthornsit,J., Sakai,N., Sasaki,Y., Watanabe,R., Osako,S. and
            Nakamura,N.
  TITLE     YIPF1, YIPF2, and YIPF6 are medial-/trans-Golgi and trans-Golgi
            network-localized Yip domain family proteins, which play a role in
            the Golgi reassembly and glycan synthesis
  JOURNAL   Exp Cell Res 353 (2), 100-108 (2017)
   PUBMED   28286305
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC062239.1.
            
            On Aug 30, 2012 this sequence version replaced NM_199383.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC062239.1, FQ218908.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1428              BC062239.1         5-1432
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q34"
     gene            1..1428
                     /gene="Yipf1"
                     /note="Yip1 domain family, member 1"
                     /db_xref="GeneID:298312"
                     /db_xref="RGD:735206"
     exon            1..76
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            77..156
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             126..1046
                     /gene="Yipf1"
                     /note="YIP1 family member 1"
                     /codon_start=1
                     /product="protein YIPF1"
                     /protein_id="NP_955415.1"
                     /db_xref="GeneID:298312"
                     /db_xref="RGD:735206"
                     /translation="MAAVDDLQFEEFGDGATLLAANPDATTINIEDPSVSFKHQPRPP
                     GSLGREEDEELLGTNDSDETELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLL
                     PVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQK
                     VSIAATVIYAYAWLVPLALWGFLLWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAVL
                     WIIPQRVIRWVLVTIALGISGSVLAMTFWPAVREDNRRVALATIVTIMLLHVLLSVGC
                     LAYFFDAPEMDHLPAAITTPNQTVAAAKSS"
     exon            157..320
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            321..401
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            402..489
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            490..606
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            607..773
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            774..956
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            957..1064
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1065..1274
                     /gene="Yipf1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggctgacca gctaccagtg cagagatcat cacaggcccc aatcattcct ggacagctgg
       61 accctctccc tgcgagatcc ccggacattt tcttcctcag ccctgggaga agagcctctg
      121 gctgaatggc agctgtggat gacttgcagt ttgaagaatt cggtgatgga gccacactgc
      181 tagcagcaaa cccagatgct accacgataa acatcgagga ccccagtgta tctttcaaac
      241 accagcccag acctcccggg agcttgggga gagaagagga tgaggagctg ctgggaacca
      301 atgactctga tgagaccgag ttacttgccg gtcagaagaa aagctctccc ttctggacat
      361 tcgaatacta tcagacgttc tttgatgtgg acacttacca ggtctttgac agaataaaag
      421 ggtctctgct gccggttcct ggaaagaact tcgtgaggct gtacatccgc agtaacccag
      481 acctctatgg ccccttttgg atatgtgcca ctttggtctt tgccatcgca atcagtggga
      541 acctttctaa cttcctaatc catctgggag agaagacata ccattatgtg cctgaattcc
      601 agaaagtgtc catcgcggcg actgtcatct acgcctacgc ctggctggtc cccctggccc
      661 tctggggctt cctcctgtgg agaaacagca aagtgatgaa catcgtttcc tattcatttc
      721 tggagattgt gtgtgtctac ggctactcgc tcttcattta tatccccaca gcagtactgt
      781 ggatcattcc ccagagagtc attcgctggg tccttgtcac gattgccctg ggcatctcag
      841 ggtccgtgtt ggcaatgaca ttttggccag ctgttcgtga ggataaccgg cgtgttgcct
      901 tggccaccat tgtgacaatc atgttgcttc atgtgctgct ctctgtgggc tgcttggctt
      961 acttctttga cgctccagag atggaccatc tcccagcagc tataaccact cccaaccaga
     1021 cagtagcagc ggccaaatcc agctaatagg gaaagcaggt cgtgccagat aactgttggg
     1081 aaggtgcggc tcttctggac acagcatcca ctgttggaaa gcagaaggcc agcatcagca
     1141 ggaaaccaat tgtcatcgca ctgaagcctc atcacctatt aacaagaatt aattgttagt
     1201 ctggggtgtc aggcacgtga tggaacactt gcctcacata catgaggccc tgaaagtaaa
     1261 atgcactgat gatgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
