LOCUS       NM_001134871            2143 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus YY1 associated factor 2 (Yaf2), mRNA.
ACCESSION   NM_001134871 XM_001057569 XM_001073895
VERSION     NM_001134871.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Wang,X., Qian,J., Meng,Y., Wang,P., Cheng,R., Zhou,G., Zhu,S. and
            Liu,C.
  TITLE     Salidroside alleviates severe acute pancreatitis-triggered
            pancreatic injury and inflammation by regulating miR-217-5p/YAF2
            axis
  JOURNAL   Int Immunopharmacol 111, 109123 (2022)
   PUBMED   35963157
  REMARK    GeneRIF: Salidroside alleviates severe acute pancreatitis-triggered
            pancreatic injury and inflammation by regulating miR-217-5p/YAF2
            axis.
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Kaneko,T., Miyagishima,H., Hasegawa,T., Mizutani-Koseki,Y.,
            Isono,K. and Koseki,H.
  TITLE     The mouse YAF2 gene generates two distinct transcripts and is
            expressed in pre-and postimplantation embryos
  JOURNAL   Gene 315, 183-192 (2003)
   PUBMED   14557078
REFERENCE   3  (bases 1 to 2143)
  AUTHORS   Madge,B., Geisen,C., Moroy,T. and Schwab,M.
  TITLE     Yaf2 inhibits Myc biological function
  JOURNAL   Cancer Lett 193 (2), 171-176 (2003)
   PUBMED   12706874
REFERENCE   4  (bases 1 to 2143)
  AUTHORS   Bannasch,D., Madge,B. and Schwab,M.
  TITLE     Functional interaction of Yaf2 with the central region of MycN
  JOURNAL   Oncogene 20 (41), 5913-5919 (2001)
   PUBMED   11593398
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Dec 11, 2014 this sequence version replaced NM_001134871.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.31492.1,
                                           SRR26643296.20717.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840107, SAMN12840117
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-151               JAXUCZ010000007.1  126378634-126378784 c
            152-277             JAXUCZ010000007.1  126378211-126378336 c
            278-430             JAXUCZ010000007.1  126325932-126326084 c
            431-2143            JAXUCZ010000007.1  126323604-126325316 c
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q35"
     gene            1..2143
                     /gene="Yaf2"
                     /note="YY1 associated factor 2"
                     /db_xref="GeneID:690262"
                     /db_xref="RGD:1582851"
     exon            1..151
                     /gene="Yaf2"
                     /inference="alignment:Splign:2.1.0"
     CDS             126..668
                     /gene="Yaf2"
                     /codon_start=1
                     /product="YY1-associated factor 2"
                     /protein_id="NP_001128343.1"
                     /db_xref="GeneID:690262"
                     /db_xref="RGD:1582851"
                     /translation="MGDKKSPTRPKRQPKPASDEGYWDCSVCTFRNSAEAFKCMMCDV
                     RKGTSTRKPRPVSQLVAQQVTQQFVPPTQSKKEKKDKVEKDKSEKEAASKKNCHKRTR
                     PRLKNVDRSSAQHLEVTVGDLTVIITDFKEKAKSAPASGAAAADQHSQSSCSSDTTER
                     GLSRSSSPRGEASSLNGESH"
     exon            152..277
                     /gene="Yaf2"
                     /inference="alignment:Splign:2.1.0"
     exon            278..430
                     /gene="Yaf2"
                     /inference="alignment:Splign:2.1.0"
     exon            431..2143
                     /gene="Yaf2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcggcgg cggcggctgc agctcgcggc gcggccttcc ccgccccctc gcctccgcgc
       61 ttccgccggc ccctcgcctc ggcgctgaca gacgggccgc ggcctcgcgc gcgtcggcag
      121 cgagcatggg cgacaagaag agccccacca ggccgaagcg gcagccgaag cccgcctcgg
      181 atgagggcta ctgggactgc agcgtctgca ccttccggaa cagcgccgag gccttcaagt
      241 gcatgatgtg cgatgtgcgg aagggcacct ccacccggaa acctcgccct gtctcccagc
      301 tggtcgcaca gcaggtcact cagcagttcg tgccccctac ccagtcgaag aaagagaaga
      361 aagacaaagt agagaaggac aaaagtgaga aggaagcagc tagcaaaaag aactgtcaca
      421 agagaaccag accaagatta aaaaatgtgg atcggagtag cgcgcagcac ttggaagtca
      481 ctgttggaga cctgacagtc attatcacag actttaagga gaaagcgaag tcagcgcctg
      541 catccggagc cgcggccgcc gatcagcaca gccagagcag ctgcagctcg gacaccaccg
      601 agcggggcct gtccaggtcc tcctcgcccc gcggagaagc ctcgtccctg aacggagagt
      661 cgcactaaac actcgagctc cacttagtca tgcctgtcct ccatggaaac acagattatg
      721 ccaacaacta ccacattttc atgacagaca ctcatgcata acctataatt tgagttttac
      781 atgaaacatg aatttgccag gattcattag atttattgca gtgtaagcta ccgaacattt
      841 ccagacgtaa catttcggtc tctgctgtga aaggccatga aaatgtggtt gaattattca
      901 ttatgcagtg ttattggtaa gtctattttc acttatagtt tagtgaattc taacacataa
      961 ttattgaatt ctctactatt ggcatgtaat gagtttaaat tttttattac atagtgcaag
     1021 ctgcctaaat atgtattatt tgagaattgt gaaacaaata gttatatgta tgcaagtcag
     1081 aggtcggctg aattactctt gctgcgacag gactttctta atgcctattc tcctaatgca
     1141 cctgctggta cttggtgtga ttaaatagga aagttgttat taaataaaga atttgtatga
     1201 acctttgcca atgtttttga catgttttta ctaaattatt gtttctgagt tatgttttat
     1261 ccatttttgc agtttatgtt tgttagtttg cttgtttttc aaagcctcgg tttgttgtac
     1321 tgtttactag ctgaatagta aacaataaaa cacggactgt gtagctttct gattgaacac
     1381 tggtatttcc tgtattctct aagacgttaa agttgaagga gtatacgtat ctggcaggaa
     1441 caggaaagaa ctgccatcct tgcaaaagct ttaacttaat gatagtttat cactgtttcc
     1501 ttgttccaaa cctgtcccgg gtcatagaca tgtgaatcta attaatataa cgtgtaacta
     1561 ttgcacagta ctggggtgca ctcctaaggt gatttaattg gccttttcct aaatataaca
     1621 attggtctgg aaaccatagt actctgggtt ccagatacag cctccagttt atgcacttat
     1681 caatatcctg aaatagaaag tatttacagc cccactcact tatgtataat taccaataaa
     1741 atatttttta tgacttaaga ttttgcattt tgtttacaac taaatggagt gtgttatgtt
     1801 gtatttgaaa atccatctta gaaactatat gctatatctt aaattctcag gttctcttgt
     1861 tttctctagc catttgctta atatatatct gcccatgggg gagtctctga aatgtaaatt
     1921 aaactaaaga caagaacctt acttgaatat cacctgtcac gtaaaagaca tcatggtaac
     1981 atttgaaggt aaagctgtgg cccctaacgg ttgtgatact ggtttccatg gtaatgtaac
     2041 tgttgaaata cagtacgctc attggcacag tggcactctt atgacgtgct agttgtgaat
     2101 ccagtttctt ggttacagta aaagtctgtg atgaaaacat tca
//
