LOCUS       NM_001107356            3433 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus YAE1 maturation factor of ABCE1 (Yae1), mRNA.
ACCESSION   NM_001107356 XM_001053501 XM_225401
VERSION     NM_001107356.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Paul,V.D., Muhlenhoff,U., Stumpfig,M., Seebacher,J., Kugler,K.G.,
            Renicke,C., Taxis,C., Gavin,A.C., Pierik,A.J. and Lill,R.
  TITLE     The deca-GX3 proteins Yae1-Lto1 function as adaptors recruiting the
            ABC protein Rli1 for iron-sulfur cluster insertion
  JOURNAL   Elife 4, e08231 (2015)
   PUBMED   26182403
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Oct 25, 2007 this sequence version replaced NM_001107356.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ216975.1, FQ211942.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-139               JAXUCZ010000017.1  51722582-51722720
            140-261             JAXUCZ010000017.1  51724158-51724279
            262-582             JAXUCZ010000017.1  51725927-51726247
            583-3433            JAXUCZ010000017.1  51726248-51729098
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q11"
     gene            1..3433
                     /gene="Yae1"
                     /gene_synonym="RGD1306613; Yae1d1"
                     /note="YAE1 maturation factor of ABCE1"
                     /db_xref="GeneID:306994"
                     /db_xref="RGD:1306613"
     exon            1..139
                     /gene="Yae1"
                     /gene_synonym="RGD1306613; Yae1d1"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..676
                     /gene="Yae1"
                     /gene_synonym="RGD1306613; Yae1d1"
                     /note="yae1 domain-containing protein 1; Yae1 domain
                     containing 1; YAE1, ABCE1 maturation factor"
                     /codon_start=1
                     /product="protein YAE1 homolog"
                     /protein_id="NP_001100826.1"
                     /db_xref="GeneID:306994"
                     /db_xref="RGD:1306613"
                     /translation="MSWFRATPEIPSPGDQDVFDEEADESLLVQREWQDHMRKRVQEG
                     YRDGIDAGKAVTLQQGFNQGYKEGADVILNYGLLRGTLSALLSWCHLHGNSSTLIGKI
                     NNLLDAVGQCEECVIKHLKSVTSPPHITDLLDSIEDLDLCHVVPPEKAVEARGDTSAD
                     ISTDADRSPNGMDCSHPECCRTQEHAHLEKPSLTWILEQTSNLVKQLGISVDILQHLR
                     QL"
     exon            140..261
                     /gene="Yae1"
                     /gene_synonym="RGD1306613; Yae1d1"
                     /inference="alignment:Splign:2.1.0"
     exon            262..3433
                     /gene="Yae1"
                     /gene_synonym="RGD1306613; Yae1d1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtgttcctg gcaatgtctt ggtttcgagc gactcccgag atccccagcc ctggagacca
       61 ggacgtgttt gatgaggaag cagacgaatc tctgttagtg cagcgggaat ggcaggatca
      121 catgaggaaa cgagtccaag aaggttacag agatgggata gatgctggca aagcagtaac
      181 ccttcaacag ggcttcaatc aaggctataa agagggtgcc gatgtcattt taaactacgg
      241 actactcagg ggaacattga gcgctttgct ttcctggtgt caccttcatg gtaatagttc
      301 aacgctgatt ggcaagataa ataaccttct ggatgcagtt ggccagtgtg aagagtgtgt
      361 gatcaaacat ctgaaatcag ttacgtcacc gccacacatt acagatttat tggactccat
      421 tgaggatctg gacctttgtc atgtagtccc gcctgagaaa gctgttgaag caagaggtga
      481 cactagtgct gacattagca cagatgctga caggagtccg aatgggatgg attgttcaca
      541 tccagaatgt tgcagaacac aagagcatgc gcatttggaa aagccaagcc tcacttggat
      601 tctggaacag acatccaact tggtgaaaca gctgggaata tcagtagaca tattacagca
      661 cctgagacaa ctgtaaaatt atctccccct ttccagagga agtaatgctc ggagtattac
      721 ttagagcatt gtgttctaga taaggtaacc actgattgat taattcctgt gtggaattaa
      781 cactagtaaa tgaaatgaca tttgtctttg tcattggtaa attgtctagt tttagataca
      841 ctcagtaatc ctcattgtca ttttcaaatt tctaatcaaa atcagtcgtt tttgtactaa
      901 caagaaccaa acattttaga acaagaaaaa aaacctaatg ttgctttctg gttttgttgg
      961 aattgggtgg tttgggacct cttcaccagc aagtaagcca gagttgccag aaacaacctg
     1021 aaggctagca tagataagta gaagcagatc tatagatagc tatacgttaa agtcaagaga
     1081 ctgtagaaac tgacacaata tttatgtcat tgaatgaata ataaaaagca aagtactaaa
     1141 acaccttatt tacatattag ctaaagttgt tgaatttcat gaaaaataga aaaaaatata
     1201 gtttgtacta aactgtaaag aaaaggaact acttagtttt ctaggtaatg aggacttggc
     1261 catattttct caaaatgtga caagctattt ctgtctgaac tgcaactttg cttgttattt
     1321 acattagaat ttaaaaaaac attactgctt tgacacgaaa tatataatct agaatagaca
     1381 gagtcacaat gagatttttg ttccatgacc caggatcagg aaaggagatt tttcatcact
     1441 ttttcccacc tgcagttatt atgaaatgcc tgacttgaga gcagcccaga taattgtccc
     1501 ttactgacag catcggttgc tatctagcca gtatttagct gtgctgaaag atgcattcat
     1561 gagagactgg ctggagaacc ttgtaaagga acaatatgtt ctgcaagttt cttaagtccc
     1621 tgtttaaaat gcacagaaca ttaagaaatt ggagtagcaa aatttgaaat agttttgtag
     1681 gtaaactaat acatgcttta agaatcaaag aaacatttga tggctgggtt tttattttga
     1741 aactttgtgg tccttggctt tgaacctagg acctcatgat cagtttccat attgaaatct
     1801 caaacccaca gaagtcttta aagtgtcagt gttgctctat actgcatttt ccatagacat
     1861 agtcatctcc aacagtgtaa ccattctaag atttgagagt aataaatttt gaggttttat
     1921 ctagacatac cctgataaga ttccctaaat agatgacccc ttgccgtcat taattgcata
     1981 aagtgcccta acactaaaag tcacagaaca tgaagtcagg tattagctgg gggagctaga
     2041 gaggtggttc agtggttaaa agcatttgct acacacccaa tatccactta aaagttaaat
     2101 atggtcccaa gcatacatta accccataca taatgaagaa ttgcaggtac atgctggctt
     2161 gccccagaga gagtctatag aatgccgagt taccctgccc tcaagttatc tgattggtaa
     2221 ataaagatgc caatatctgg gcagaagaaa cataaatggg gtttaggttt cacgggcttg
     2281 gtgttggaag agaaccgtga ggggaaggag agagcaaaaa agctcggtcc tgaggactgg
     2341 ccgattgaag ttaaaagcag cccaaataag acctaataaa taactcaggg ttttcgataa
     2401 ataaattcta acatagaaga taatcaactg cccagctttt atactgttta agtcttatta
     2461 taaatatgaa aattatgtgt agtttttata ttaaaaaatg gtctaaggca acataaaaac
     2521 tcttgagaca taatttctac aacatagaga ttgctaagag gacctctgat gccctctatc
     2581 ctctgtgtat gcatgcaaag acgtataccc atacaccaca cacaaaaggc gggaactctt
     2641 gcttttccaa agctctaagt agctcctgga ctacagatgg tatgatcaac cagaaacagt
     2701 aatggaaact acttgactcg gccttgcttt ccatgctgag ccatccaggt ctcatgaaaa
     2761 ggccctagtg aatgtaaagg ggaaggcaag agtgccctgc ggctgtgaca agttcatggc
     2821 caagagattg catctgaagt aagttacttc tggcactggc acagctagat ctttttaagc
     2881 aaatggggaa gggggaccct ttcctggcac gtaagtcatt agaactacta aggccaccac
     2941 attgtgattt gcagactgag tagacagcta aattcctctc caagcatcat catttgcagc
     3001 catgcaccac ttgttgggat ggattttgag aagtatgacc ccggggagtt ccattgaaca
     3061 aatattaaaa aatataaggt gcttatgatg tcacaaagag ataggaccgt atgggaccat
     3121 attgtgtctg aacctcattt ttgactaaaa cataactgtg cggcactgtt tgctaactgc
     3181 tttcgtggta aacccagata aaggccaagt tatgattatg atcctcctca ctattcaaag
     3241 taaggttaca gctcttattg ctttgtgttc tagtctaaga cctaggagaa aatagttaat
     3301 ggatgtgtgt atgtagattg gagtctttaa cttatttttt taattattcc caaatttcat
     3361 ttgtaaatga aataagcgta agctgttcat aaactaccta ccaataaaga ctttgctgtc
     3421 cagacatctc aaa
//
