LOCUS       XM_003748930            2792 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus X-ray radiation resistance associated
            1 (Xrra1), transcript variant X1, mRNA.
ACCESSION   XM_003748930
VERSION     XM_003748930.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003748930.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003748930.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2792
                     /gene="Xrra1"
                     /note="X-ray radiation resistance associated 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:365313"
                     /db_xref="RGD:1305502"
     CDS             244..2607
                     /gene="Xrra1"
                     /codon_start=1
                     /product="X-ray radiation resistance-associated protein 1
                     isoform X1"
                     /protein_id="XP_003748978.1"
                     /db_xref="GeneID:365313"
                     /db_xref="RGD:1305502"
                     /translation="MVSSGIYKMDNGKPCLNNCFPAKSLLRLPEEGRGHWLVARKGSM
                     KKGVAKASTEGQENQKKVSFDTGLKKISRRDSQAEIGGHILDRSFLLKHHSARKPSEL
                     CTINVSGMKFSKAKEKDFKHFTSVIYINASENLLPLDVFHTFPTLKELELAFNGIKMV
                     YVKYGDFKTLEFLDLSFNSLTEEAICDLGILPHLRVLLLTGNGLTSLPPNMAVKEQEA
                     SVTSLTSKKYILRFPALETLMLDDNKLSNPSCFASLAGLRRLKKLSLDQNKIFRIPYL
                     QQVQLRDGTGDWVTEGPNSQKELQPQMWIFETPDEQPNYTVLPMKKDVDRTEVVFSSY
                     PGFSTSETTKVCSLPPIFEILPVKSLKARNQTLAPPFPELRYLSLAYNKIAKEDAVLP
                     AALFPSLCELIFHNNPLVAHTRGIPPLLKSFLQDRLGIRLVRKKLVKPKHHMLMPRKE
                     SRKVKTYIPKVSKHSLVPHHLSTITDNRPSSLLPEPELSTENTSHEALFTNEGPEGPP
                     VTHRAFVPMPPICSDSTVHSDIVSHQSRTAGLMSPEHPSDDDAKSTESIFLTQVNELP
                     SSTVHRDNLEAEESHQRRPSTAPRETKRTRRKQTATSLHNKYDGYEELLTVKPDPAFV
                     EPKGIQKNAQALHRMLKQPLICRSSKPRLDTFQKPYIPKEKRVARIPIPPPRKTRAQL
                     LDDILIRMRDPRNVTEAPLGAVLQRRGQQRLVNQKQYREAKRLLKEFRARYRQLVRSS
                     LRTVFTSSPPPRPPTRRALSAGQPKLGRFLEFMDEFCQEPTAGDSKE"
ORIGIN      
        1 tccgttgcta gccacaccgt cgcggttact aaggagtggg tggggaaggt tgtggcaagc
       61 gccaccgtgg agcgactccg agattcccgt gaggctcgca ggcgtgcact ccgcctgaca
      121 gagacctcgc ctccgcgggt tcttcggagg cggaaacgac gccgaagaca ggtaaagaga
      181 caggtaaaga agcaaaagca aaaggaaggc aaagaatcac tcccgaagtc aaagatcagg
      241 gagatggtgt cttcaggaat atacaaaatg gataatggga aaccttgcct caacaactgc
      301 tttccagcca aaagtctcct tcggttgccg gaagaaggcc gaggacactg gctagtggct
      361 cggaaaggca gcatgaagaa aggtgtggct aaggcatcca ccgaaggtca ggaaaaccag
      421 aagaaagttt ctttcgatac tgggttgaag aaaatatctc ggcgggatag ccaggcagaa
      481 attggtggac atatcttgga ccggtccttt ctgctcaagc accactctgc cagaaagcca
      541 tcagaacttt gcactatcaa cgtgagtggc atgaagttct ccaaggcaaa ggaaaaggac
      601 ttcaaacact ttacgtctgt gatttatatc aatgcctctg aaaacctgct gcctctagat
      661 gtctttcaca catttccaac cctaaaggag ttggagcttg cgttcaatgg catcaagatg
      721 gtctatgtga aatatggaga cttcaagaca ttggaattct tggacctttc cttcaacagc
      781 ctgactgagg aggccatctg cgatctgggg attctgccac atctccgtgt gctgctgctc
      841 acgggcaacg ggctcacctc tctaccaccc aacatggctg tcaaagagca ggaggcatct
      901 gtgacatcat tgacaagcaa gaagtacatc ctgaggttcc cggcgctgga gaccctgatg
      961 ctggatgaca acaaactgtc caatcccagc tgctttgcca gtctggctgg gctcaggaga
     1021 ctgaagaagt tgagcctgga ccaaaacaag attttccgga tcccatacct acaacaggtt
     1081 cagctccgtg atgggacagg ggactgggtt acagaggggc caaattccca gaaagagctg
     1141 cagccccaga tgtggatatt tgagacacct gacgagcagc caaattatac cgttctgccc
     1201 atgaaaaagg atgtcgaccg cacagaggtt gtgttctctt cttaccctgg attttcaacc
     1261 tcagagacaa ccaaggtatg ttcacttcct cccatatttg agattcttcc tgtgaagtca
     1321 ctaaaagcaa ggaaccagac gctggccccg cctttcccag agctgagata ccttagcctg
     1381 gcctacaaca agatcgcaaa ggaggatgcc gtcctgccag cagctctctt tccctccctc
     1441 tgtgagctca tcttccataa caaccctttg gtagcacaca cacgagggat cccaccactg
     1501 ctgaagagtt tcctccagga ccgcctgggt atccgcttag ttcgaaagaa actggtaaag
     1561 cctaagcacc acatgttgat gcctcggaag gaatcgcgga aggtgaaaac ctacatcccc
     1621 aaggtgtcga agcattctct ggtcccccat cacctcagca cgatcacaga caatcgtcca
     1681 tcaagtctcc tgccggagcc ggagctctcc actgaaaaca cctctcacga ggcactgttc
     1741 accaacgagg gcccagaagg ccctcctgta actcaccggg cctttgtgcc gatgcctccc
     1801 atctgctccg actccaccgt tcacagtgat atagtgtccc accagagccg gacagccggc
     1861 ctcatgagcc cagagcaccc atcagatgac gacgccaaga gtacggagtc tatcttcctg
     1921 acccaggtga atgagctgcc atcctccacc gtccacaggg acaacttgga ggcagaggag
     1981 agtcaccaaa ggaggccatc aacagcaccc agagagacaa agaggactcg gaggaagcag
     2041 accgctacct ctttgcacaa caagtatgac ggctatgagg agctgctcac agtcaagcct
     2101 gacccagcct ttgtggagcc aaagggcatc cagaaaaatg cacaggccct gcatcgcatg
     2161 ttgaagcagc cgctcatctg ccgctcctcc aagcccaggc tggacacttt ccagaaaccc
     2221 tacattccca aagagaagag ggttgcgagg ataccgattc caccccctcg gaagacccga
     2281 gcgcagctgc tggatgatat cctcattcgc atgcgagacc ctcggaacgt tactgaggct
     2341 ccactgggcg ctgtgttgca gcggcgtgga cagcagcgac tagtgaacca gaagcaatac
     2401 cgggaggcca agcggttgct caaggagttc cgcgcacgct accggcagct ggtgcgcagc
     2461 tcgctgcgga ctgtgttcac ctccagcccg ccgcccaggc cgcccacccg ccgtgcgctg
     2521 agcgccggcc agcccaagtt gggccgcttc ctcgagttca tggacgagtt ctgccaggag
     2581 cccacggccg gcgactcgaa agagtagagc tgggcaccgc cctccccaag ggctctgcgc
     2641 cctggaccgt gcccagccct gaacagaagg ggcttcggct ccatttcgct ccgtggtcag
     2701 cctggggaac acagcaggac cttgcctctc agcccggcca ggccgcacct ggtggctggc
     2761 ccagcagcaa taaagagtgg tgtagagcaa ta
//
