LOCUS       NM_001012229            1909 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus XK related 9 (Xkr9), mRNA.
ACCESSION   NM_001012229 XM_575746
VERSION     NM_001012229.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Straub MS, Alvadia C, Sawicka M and Dutzler R.
  TITLE     Cryo-EM structures of the caspase-activated protein XKR9 involved
            in apoptotic lipid scrambling
  JOURNAL   Elife 10, e69800 (2021)
   PUBMED   34263724
  REMARK    GeneRIF: Cryo-EM structures of the caspase-activated protein XKR9
            involved in apoptotic lipid scrambling.
            Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY534263.1.
            
            On Apr 20, 2005 this sequence version replaced XM_575746.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY534263.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q11"
     gene            1..1909
                     /gene="Xkr9"
                     /gene_synonym="XRG9"
                     /note="XK related 9"
                     /db_xref="GeneID:497099"
                     /db_xref="RGD:1359260"
     exon            1..99
                     /gene="Xkr9"
                     /gene_synonym="XRG9"
                     /inference="alignment:Splign:2.1.0"
     exon            100..743
                     /gene="Xkr9"
                     /gene_synonym="XRG9"
                     /inference="alignment:Splign:2.1.0"
     CDS             472..1593
                     /gene="Xkr9"
                     /gene_synonym="XRG9"
                     /note="X Kell blood group precursor related family member
                     9 homolog; XK, Kell blood group complex subunit-related
                     family, member 9; X-linked Kx blood group related 9"
                     /codon_start=1
                     /product="XK-related protein 9"
                     /protein_id="NP_001012229.1"
                     /db_xref="GeneID:497099"
                     /db_xref="RGD:1359260"
                     /translation="MKYTICNFMMSVLGIIIYVTDLVADIVLTVRYFYDGQYVFGVLT
                     LSFVLCGTLIVHCFSYSWLKDDLKKAGGENEHYFLLLHCLQGGVFTRYWFVLRTGYHV
                     VFKHSHRTSNFMEEQTDPHKEAIDMATDLSMLRLFETYLEGCPQLILQLYAFLERGQA
                     NFSQYMVIMVSCCAISWSTVDYQIALRKSLPDKNLLRGFWPKLTYLFYKLFTLLSWML
                     SVVLLLFVDVRTVLLLLLFLWTVGFIWAFINHTQFCNSLSMEFLYRLVVGFILVFTFF
                     NIKGQNTKCPMSCYYTVRVLGTLGILTVFWIYPLSIFNSDYFIPISATIVLSLLFGII
                     FLGVYYGTYHPNINAGTQHDEPDGKAPQRDCRIRYFLMD"
     exon            744..964
                     /gene="Xkr9"
                     /gene_synonym="XRG9"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1892
                     /gene="Xkr9"
                     /gene_synonym="XRG9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatcctaaag tgttcgacag tgaagaaata aaactcatat gctgacgact tccaagaagg
       61 gacattgaat taaagaaggc ttttttatat ttgtcacaaa cattggtatc cgtaatgaag
      121 attgtgatgg aggagaagat acagcagggc ctccttgtgc tactgggtct ggagtagaga
      181 ttttttaaaa aagaaagtta aagttattca tttttgtttt agtgctccga tttcatagta
      241 tttatttatt tatttatttt tggtactagg gactgaatat aggaatttat aaatgttaga
      301 taaacactct gtcactgaac tatatcacca tattcttttc tctgagtaga ctcagagagt
      361 agaaattaca attcagtgct aacacaaaag atacactagt atccattgtg gcatttcccc
      421 tgtttttgta tctgaaaaag agtagctagg caagagccac aggccttcat aatgaaatac
      481 accatatgca attttatgat gtcagttttg ggcattataa tctatgtaac tgatttagtt
      541 gcggacattg tcctaactgt taggtacttc tatgacggac aatatgtttt tggtgtttta
      601 accttgagct ttgtgctttg tggaacactc atagtccatt gttttagcta ctcatggttg
      661 aaggacgact taaagaaagc aggaggagaa aatgaacatt attttcttct gcttcattgc
      721 ttgcaaggag gagttttcac aaggtattgg tttgtcctga gaacaggtta ccatgtggtt
      781 ttcaaacaca gccacaggac aagtaatttt atggaggaac aaacagatcc tcacaaagaa
      841 gcaatagaca tggccaccga cttgagcatg ctcagactgt ttgagaccta cctggagggc
      901 tgcccacaac tcatccttca gctctatgcc tttctggagc gtggccaggc aaattttagt
      961 caatacatgg tcatcatggt ttcctgctgt gctatttctt ggtcaactgt cgactatcaa
     1021 atagctttaa gaaaatcatt gcctgataaa aatctcctca gaggattctg gcccaagctc
     1081 acgtatctct tctacaagtt gtttaccttg ttatcctgga tgctgagtgt tgtacttctg
     1141 ctctttgtgg atgtgaggac tgttctgctt ctgctcttat ttctgtggac tgtaggcttc
     1201 atatgggcat ttataaatca cactcagttt tgcaattctc taagtatgga gttcttatac
     1261 aggctggtgg ttggattcat ccttgtgttc acgtttttta atatcaaggg gcagaatacc
     1321 aaatgtccaa tgtcttgcta ttacactgta agggtgcttg gcaccctggg aatcttgact
     1381 gtgttctgga tttaccctct ctctattttt aactctgact attttatccc tatcagtgcc
     1441 accatcgttc tctctcttct atttgggatt atttttcttg gtgtgtatta tggaacttat
     1501 cacccaaata taaatgcagg gacacaacac gacgaacctg atggaaaagc acctcagaga
     1561 gattgtagaa taagatattt tctaatggac taagttgtga atttatgaga aatgtctttt
     1621 ttttttcatt gcctagtaaa gaaaatgtct gtcatatgta catgctgtta cttagtttgt
     1681 cacttctgac ttgaaatgag ttatggtaca tggtgaatga gaagataata ttttaaggat
     1741 taaaataatt tcttctttgt gttgccaagg attaggccct gtgcatgtta tcccaccact
     1801 gagttgcaac cccagccatc tcgctggttt caaaagtctt gagtattgag gtagttacta
     1861 ttccatcaag cgaataaaca gtgaggccca taaaaaaaaa aaaaaaaaa
//
