LOCUS       NM_001398730            4475 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus WAS/WASL interacting protein family, member 3
            (Wipf3), transcript variant 1, mRNA.
ACCESSION   NM_001398730 XM_008762877
VERSION     NM_001398730.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4475)
  AUTHORS   Weiler,M.C., Smith,J.L. and Masters,J.N.
  TITLE     CR16, a novel proline-rich protein expressed in rat brain neurons,
            binds to SH3 domains and is a MAP kinase substrate
  JOURNAL   J Mol Neurosci 7 (3), 203-215 (1996)
   PUBMED   8906616
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Dec 22, 2021 this sequence version replaced XM_008762877.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: U31159.1, SRR26643285.16241.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-132               JAXUCZ010000004.1  84880795-84880926
            133-281             JAXUCZ010000004.1  84910609-84910757
            282-414             JAXUCZ010000004.1  84936918-84937050
            415-549             JAXUCZ010000004.1  84938768-84938902
            550-1323            JAXUCZ010000004.1  84939972-84940745
            1324-1446           JAXUCZ010000004.1  84942727-84942849
            1447-1548           JAXUCZ010000004.1  84943791-84943892
            1549-1625           JAXUCZ010000004.1  84953402-84953478
            1626-4475           JAXUCZ010000004.1  84957401-84960250
FEATURES             Location/Qualifiers
     source          1..4475
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..4475
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /note="WAS/WASL interacting protein family, member 3"
                     /db_xref="GeneID:259242"
                     /db_xref="RGD:708559"
     exon            1..132
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            133..281
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     CDS             192..1649
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /note="isoform 1 is encoded by transcript variant 1;
                     corticosteroids and regional expression protein 16; SH3
                     domain binding protein CR16"
                     /codon_start=1
                     /product="WAS/WASL-interacting protein family member 3
                     isoform 1"
                     /protein_id="NP_001385659.1"
                     /db_xref="GeneID:259242"
                     /db_xref="RGD:708559"
                     /translation="MPVPPPPPPPLPPPPPPLGAPPPPPPPGPPISTDAPSLRKSDLK
                     GRSALLADIQQGTRLRKVTQINDRSAPQIESSKGTSKEGGAAGSNARGGSTPPALGDL
                     FAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPTKAISGPLPAPASPRLGNASDTH
                     SSARPVPPRPSVPAPPPPTTPPPPPPPPPPPPPPPLPPASPIKAPSVSPPVPPTKGNP
                     SAVPAPIPCVPPLPPPPPTPPPLPPASALSEKAVRPQLAPLHLPPIPPPLPLLPPYGY
                     PALHSEPSSPAQDVREPPAPPPPPPPPPPPPPPPLPTYASCSPRAAVAPPPPPLPGSS
                     NSGSETPPPLPPKSPSFQTQKALPTPPGAPGPQIILQKKRRGPGAGGGKLNPPPAPPA
                     RSPTTELSSKTQQPGGQLRNGGQHVIDDFESKFTFHSMEDFPPPDEYKPGQKIYPSKV
                     PRSRTPGSWLQAEAAGQSSDDIKTRNSQLSLKALR"
     exon            282..414
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            415..549
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            550..1323
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            1324..1446
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            1447..1548
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            1549..1625
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
     exon            1626..4475
                     /gene="Wipf3"
                     /gene_synonym="Cr16"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccaggcgcg cagaagcaac gccaggcact gccggcagat caactgggat cctcgaggcg
       61 gcaagaggac agggacagcg gggaccgcga ctccagtaaa agtccagtcg gcccggttac
      121 ggccagctgc agaccagaac ctactctctt ggagccattt gtaagcaaga gacgccaacg
      181 ctgtgtgaca tatgccggtg ccaccaccac cacccccacc tcttcctcca ccccctccac
      241 ctctgggggc tcctccccct ccacccccac cagggccccc gatcagcaca gacgctccca
      301 gcttaaggaa gtcagatctg aaaggtcgga gtgcactgtt ggctgatatc cagcaaggaa
      361 cacgcctgcg aaaagtcacc cagatcaatg accgcagtgc cccacaaatc gagagttcaa
      421 aaggaaccag caaagaggga ggagctgctg gcagcaatgc ccgtggagga agcacgcccc
      481 ctgccctggg agatctcttt gctggtggct ttcctgtgtt gaggccagca ggccagcggg
      541 atgtggcagg tggcaagacc ggacagggcc ctggctcccg agctccttct ccccggctcc
      601 ccaccaaagc catcagcggc ccccttcccg ctcctgcatc ccccaggcta ggcaatgcct
      661 cagatacaca cagctctgcc aggccagtcc ctcctcgccc cagtgtacct gccccaccgc
      721 ctcccactac acccccaccc ccgcctccac ctccacctcc acctccacct ccacccctcc
      781 ccccagcctc ccccatcaaa gccccatcgg tgtccccacc tgtccctcca accaagggga
      841 atccgtctgc ggtgccagcc cctataccct gcgtacctcc ccttccgccc cctcccccga
      901 ctccgccccc tctgccccca gcctcagcac tcagtgagaa ggcagtgagg ccccaactag
      961 ccccgctgca cctgccaccc ataccacctc cgcttcctct cctgccaccc tatgggtacc
     1021 cggcgctcca ctcagagccc agcagccctg cccaggacgt gagagagcca ccagctcctc
     1081 ctccaccacc gccaccacca ccaccacctc caccaccacc gctccccacc tacgcctctt
     1141 gctctccaag ggccgctgtg gccccgcccc cgcccccttt gccaggctcc agcaacagcg
     1201 gcagcgagac tcctcccccg ctgcccccca agtcccccag cttccagacg cagaaagcct
     1261 tgcccacacc tccaggtgct cccggccctc agatcatcct gcagaagaag cgtcgaggcc
     1321 caggagccgg tgggggaaag ctaaacccac ctccagcccc acctgcaaga tcgcccacca
     1381 ctgagctctc cagcaaaacc cagcagcctg gaggacagct gcggaatgga ggccagcacg
     1441 tgattgatga cttcgagtct aaattcacgt tccactccat ggaagacttt ccccctccag
     1501 acgaatacaa accaggtcag aagatttacc ccagcaaggt ccccagaagc cgcacacctg
     1561 gttcctggct ccaagctgag gcagctgggc agagctctga tgacatcaaa accagaaatt
     1621 ctcagttatc tctaaaggca ctccggtgag aagatggtga cgtcaaggtc ctggggttct
     1681 ggactagaca ccaggacaac tccttgagac tctactgtac tcaagatcta ctcctttgaa
     1741 tgcaggcacc gaactgagca tttatttttt ttgtaaataa tgatttgcat gaagccctta
     1801 ggcaccatgt tagtcaactt tcatttgagt aacattttaa tatttttaaa acaagcaccc
     1861 tgacatttgt ccgtcttgta cagatggctc ccgatcccgc cctgtggtgt ccactgtgac
     1921 tagaacatat gcttgcaggc tggtccttcg aggattctga aaccttttcc agagcatcct
     1981 tagttttcga gtagtccaaa agtcataact atccacaaca gcttcttatt ggcatgactc
     2041 tcatcactcc aaccgcaaaa tcaaaccaaa taatgcctta taaaccacgc agctcagagg
     2101 aagcagtgtg tcgccaggtc ctggtgttgc cactcagctt ccagtgagcg agaagccatg
     2161 tctcgcttcc ttttagcagt acagggacgt cattttgctg cctaatgtgt gtatatatat
     2221 atatatttat atcccaaggt aaaggctaga gtgggcgtgg cccctcccat gccttccgca
     2281 gggccccttt tgtaactgaa ttcttttaca ggtagccaat gctcttactg tttacagcat
     2341 ccccagcgcc cagtctttac cgctttcctt caacacctcc aagttcccag ctccatgctg
     2401 gtagccaggg taaagtcagc tttatgagat tttgatatcc tcccatccct gtagactacg
     2461 gttgtatata gctcatgatt atgataagtt tatttttacc tcagaagtct ccctccccaa
     2521 actctaccca gagtgtaaga tttacatgga aaatacaaca tatatttaaa aagaacaaga
     2581 ataaaaggag gctggagaaa tagacccact ggtaacatgc ctgctaagga catacacaca
     2641 gagctggatg tggtaacaca cacttgttat tccattactg ggggagcaga ggcaggcaga
     2701 tccctgtgac tcactggcca gccaagctat tcaaggagcc tcaggttcca gaaagtggca
     2761 ttgtctcaaa atacaaggtg gcaactcctg aggccacaac acccaaagtt gacctctggc
     2821 ctcttacagg ttcacgcatg acatgtgtgc acacatccca cacagggaca tacacactca
     2881 tacagaaaca catacgaaag agcagagcag ctcttggagc atatctcaaa tatcctgccc
     2941 cattggtagg agtctcagaa tacccatcag cccaaaggac cttctctctg agcttcatct
     3001 gagagcgcag atggctctgt tgcctggtgg cgtgtgcctg ggatgcccag cagtaatagg
     3061 cagcgagttc agctgtcctg aatagacaga gggccacgcc aggctggggc tgctctctgc
     3121 acccttcttt gaatctcaag ggagaaaagt atgcttttgc ttcttgtcag gccccaaatg
     3181 ctcccatcca ctggagaggg gaggctgtag cagaggaggg ggaaatggga ggaaacagtc
     3241 cgatccctca ctgtattcag aatagctgca gacagaagag aggggaaatg aacaatggtg
     3301 tgctttggag cactccgacc acaagaacat tagcccaggc cgggccatca ggggccaatg
     3361 gattaggaga gtgttcagct gtgtgtctgc acacacctga ctattgtttg gagcaaatgt
     3421 cctgcattag tgtcgtgctt tctcctgcca gataggagaa actgagccag ggtcaagttt
     3481 ccaaaatctc tggggcagtg actcaagccg ttgttacagc cacatcagca gacatgacgg
     3541 ttctacgttg ctggtttgtt acggtggctc tggaagtgtg cagaaaggtc agaagccaca
     3601 ctactcttct cctagccatg cagagtaata atcattaaaa agctttcata actacgatga
     3661 gggccatcag gaaggcagtc ctgcctttgg aatcagtgaa ctgttcacat acggtgtatg
     3721 ttcaccatgt attcacatgg tgtatgttct atactgctgg cacaggaatt taaactattc
     3781 aagagtgggg gagatgtctc tgtctgtaga catcctgctg cccaagcatg aggaccggaa
     3841 ttcatatccc caggacctat ataaaagtca ggcatggggg aagcatgtct gtaatcctag
     3901 aagttgggta gaggcatctg accccaggaa ggtcggtggc cagccaacct agcaaaattt
     3961 gcaagttgca agctgcaggt ttagtgagaa taagatagag atagaccaaa aaaagatacc
     4021 tgtagatggc ctttgggcct tcacatgcat gtgcacacat gtgcccttgt tcatatgcac
     4081 acacacacac acacacacac acacacacac acccgtatat ataatacata aatatttttt
     4141 acaaacttat ttaagggcat aaggaaggaa caagcagaaa ccaaaaaata gcaagcaagg
     4201 agcattctca gggatctggc ctagcagctc tcctcaagac ctgtcacgga gcctaccacc
     4261 tccaagttca agtgggtacg ttcggttccc accagcagtg tacaggttag gcctttgact
     4321 gtgaactcac gcatggagtt gtccctgcta tccttgccca cccccacatt gcagactgtg
     4381 accctgcccc atgtctctgc ctgtatttta tatttattgg tgtctcctgc tgcaaaatca
     4441 ttcctttgta cctaataaac tttaataagt gagaa
//
