LOCUS       XM_039089920            2194 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus WD40 repeat domain 95 (Wdr95),
            transcript variant X1, mRNA.
ACCESSION   XM_039089920
VERSION     XM_039089920.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039089920.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2194
                     /gene="Wdr95"
                     /note="WD40 repeat domain 95; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 1 Protein, and 83% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100361588"
                     /db_xref="RGD:1561029"
     CDS             57..2045
                     /gene="Wdr95"
                     /codon_start=1
                     /product="WD repeat-containing protein on Y
                     chromosome-like"
                     /protein_id="XP_038945848.1"
                     /db_xref="GeneID:100361588"
                     /db_xref="RGD:1561029"
                     /translation="MMGSSSASLALAKRQAECNRTVFRVHKGVKAFSFCRKKNLLATG
                     GLDRIVRVWNPYLPGKPTGVLRGHMAPVMYVHVASEENKVFSVSADNTVKIWDLETHS
                     CCCTVSSKASGIKGELTACLYLPGPRALCVATGTLALFHLKAGSVPEPHLLRSHQEPV
                     VCCRYNPAFRQVVSCCEASVVKVWDLETGRWVSEFIGNAGITCLAFDSSGRRLVTGGR
                     DGDLKIWSYNNGHCLHTLQHDENQNEVCDCTYMEVNRNGCVIAVGWDRRINVYFDIPR
                     DFHHFRKPQPHWQDDLNHGHKEDILCVAQCPPFLLATSSYDGEIIVWNVISGHMYCKL
                     NTPSPMDPREGPDRSVSRLTFLKTRLTKLDSTAASLISNGPGGSVSFWKLFSGSGLIA
                     NFTPAREKAQVSGIVVTSGDTVAYLADQHGFIYVYDIQEYGLWGAELQPPNMVTSWRA
                     HVSMVTSLELIEGDSILLSSSLDCTVRLWSKDGAYIGTFGQNRPWDVYTPDSWGHPRV
                     PLEILTDPQSMPTHLVLETDVPAGCSGGRQEQGHMTEEKVLFETEKTHNPPSPEGPVV
                     EVEVKADKSQWSAFSHDRLLSARRKPCWKVPELKWPSIYQALQCHELDFVSALREKPD
                     LSVTGFDLLPVSFHSPEREVELLERKRLSPWRGFLPEC"
ORIGIN      
        1 gagcaacaga tgtcaaggaa aagctgaatg aaataagaaa cgttgggaag aatgtcatga
       61 tggggagcag ctcagcatcc cttgctctgg ccaaaaggca agcagaatgt aatcgcaccg
      121 tgttccgtgt ccataaggga gtcaaggcgt tctccttctg caggaagaaa aacctgctgg
      181 cgacaggcgg gctggatcga atcgtcaggg tctggaatcc ttacctgcct ggaaaaccaa
      241 caggtgtgct gagaggccac atggcccctg tgatgtacgt acacgtagct tcggaagaaa
      301 acaaagtgtt ttccgtgtct gctgacaaca cagtcaagat ctgggatctg gagacccaca
      361 gctgctgctg tacggtctct tccaaagcca gtggcatcaa gggagaactc acagcctgtc
      421 tctatctccc cggacctaga gccctgtgtg tggccacggg taccctggct ctctttcacc
      481 taaaagcggg atctgtccca gagccccacc tgctgcgttc ccaccaagag cccgtggtgt
      541 gctgcaggta caacccagcc ttcaggcaag tggtcagctg ctgcgaagcc tctgtagtga
      601 aagtgtggga cctcgaaacg ggaagatggg tgtctgaatt tattggcaat gctggcatca
      661 cctgtctggc ctttgactcc agcggaagaa ggcttgttac tgggggaaga gatggcgatc
      721 tgaaaatatg gagctacaat aatggacact gtctgcacac ccttcaacac gatgaaaatc
      781 aaaatgaagt ctgcgactgt acctacatgg aggtgaaccg aaacgggtgt gtcatagctg
      841 ttggatggga ccgaagaata aacgtgtatt ttgacattcc tcgtgatttt catcacttcc
      901 ggaagcctca gccccactgg caggatgacc tgaaccatgg gcacaaggag gacattctct
      961 gtgtggctca gtgcccccct ttccttctgg ccacctccag ttacgatggg gagataatag
     1021 tttggaatgt catctcaggt cacatgtact gcaagctgaa cactcccagc cccatggacc
     1081 ctagagaagg cccagacaga agtgtttccc gactcacctt cctaaagaca cggctgacga
     1141 agttggattc aacagctgct tccctcatca gcaatgggcc cggaggttct gtcagtttct
     1201 ggaagctctt tagtgggtct ggcctcattg caaacttcac tccggccaga gaaaaagcgc
     1261 aggtgagtgg catcgtggtg acatcaggag acactgtcgc ctacctggct gaccagcatg
     1321 gatttatata tgtctatgac atccaggagt atggcctctg gggagcagag ctgcagcctc
     1381 ccaacatggt gacatcctgg agagctcacg tcagcatggt gacttctctg gagctgatcg
     1441 agggggatag catcttactg tcctcctccc ttgactgcac tgtacgcctg tggagcaagg
     1501 acggggcata catagggacc tttgggcaga atcgcccctg ggatgtttac actcctgact
     1561 cctggggtca cccaagagtc cccttggaga ttctaacaga ccctcagagc atgcctaccc
     1621 acctggtact ggaaacggat gttccagctg gatgctcggg aggacggcag gagcagggcc
     1681 acatgacaga ggagaaggtc ctgtttgaga ctgaaaagac ccacaaccct ccgtccccag
     1741 aaggccccgt tgttgaagtg gaggtgaaag cagataaaag ccaatggtct gcatttagcc
     1801 atgacagact attgtcagct cgaagaaagc cttgctggaa ggtgcctgag ctcaaatggc
     1861 ccagcattta ccaggccctc cagtgccatg agctcgattt tgtgtctgct ctcagagaga
     1921 agccagattt gtctgttacc ggctttgact tgctccctgt cagtttccac agccctgaaa
     1981 gggaagttga gctgctggaa agaaagagac tctcaccctg gaggggtttc ttgcctgagt
     2041 gctaaggacc tcgacctctg cgcttggcca gtgtaatgga agggtctgac tgagattaag
     2101 gcttgtccct gaggcacaga aaagaacaag atgagaaatg atctcagtcc ctgtgggctc
     2161 atcctgcagc aattagagct gaaatttcag agaa
//
