LOCUS       NM_001191949            2453 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus WD repeat domain 93 (Wdr93), mRNA.
ACCESSION   NM_001191949 XM_006229401 XM_574479
VERSION     NM_001191949.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Oct 17, 2022 this sequence version replaced
            XM_006229401.4, NM_001191949.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.2303.1,
                                           SRR26643293.3710.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000001.1  143096575-143096724
            151-488             JAXUCZ010000001.1  143103455-143103792
            489-681             JAXUCZ010000001.1  143104552-143104744
            682-746             JAXUCZ010000001.1  143106656-143106720
            747-825             JAXUCZ010000001.1  143109998-143110076
            826-941             JAXUCZ010000001.1  143112333-143112448
            942-980             JAXUCZ010000001.1  143114807-143114845
            981-1016            JAXUCZ010000001.1  143119474-143119509
            1017-1101           JAXUCZ010000001.1  143121652-143121736
            1102-1273           JAXUCZ010000001.1  143124826-143124997
            1274-1344           JAXUCZ010000001.1  143127287-143127357
            1345-1431           JAXUCZ010000001.1  143127833-143127919
            1432-1551           JAXUCZ010000001.1  143128865-143128984
            1552-1765           JAXUCZ010000001.1  143129850-143130063
            1766-1829           JAXUCZ010000001.1  143131629-143131692
            1830-1986           JAXUCZ010000001.1  143132774-143132930
            1987-2179           JAXUCZ010000001.1  143133267-143133459
            2180-2453           JAXUCZ010000001.1  143142666-143142939
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..2453
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /note="WD repeat domain 93"
                     /db_xref="GeneID:499189"
                     /db_xref="RGD:1559862"
     exon            1..150
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            151..488
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     CDS             189..2270
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /codon_start=1
                     /product="WD repeat-containing protein 93"
                     /protein_id="NP_001178878.1"
                     /db_xref="GeneID:499189"
                     /db_xref="RGD:1559862"
                     /translation="MSSFKGSQAQKPRLSVFSKGPLEIPSPTEADWPKDDEKDFVFKD
                     VDQELDSLPQPYRMINKLINHLFDRSWEVIENRESFRENVKNWTVPAIYPPTAEIQLD
                     KMPGGMAVSQDYLFIGGPKGFSIYNLHNYKKMLVLEKFKVDVISIWATDLGNDVLIVP
                     VDEMGIVRLFYLCKDSLYLIKAINETDDTTKQSTCVRMEVSQSGDYAAFLFQGAGDVW
                     LEVYKLPKEIWLKEVEHPQLTLNQKKKPKQLQLNTPESAVTESTEKSLGSSVSPNTTQ
                     DLNISFKSDLKLSLPVFIMKIKPPKPIAGTTFKSPLEIFAKVEDYFGLGSGQNHFIKD
                     VQWEQHMEIFYASYKKHLEGEWEEEPLSMATFHFFYTNSLTTTPTDVKSSSGTACVLG
                     IHWTGSHNFFLYSLNKTLKDKTDCENVWPCAAPIVVSQISSFSSYLALACEDGVLILW
                     DLAQGFLFGVIALPEKCFCQSIHFLRFFLVHKGQNVYPDYPVKFEVMCVVLCTNASLH
                     LVTASGTKGPTSKLLVDSPTMSTEEAIYAVAPVPALPGMVLIFSRNCSVSLMDVAKAE
                     TICAFSAPTCHPPDIPWKPLFVVSPHHPFFLLHGARPYDNTNSTHDPKNTTDSVFYFN
                     FEDYSLLEDISKKCTVSQKDLAYSQVLSMEKRYEQFLQKSFQKSQMKGREQWSRLRKY
                     SIMLQKENLKK"
     exon            489..681
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            682..746
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            747..825
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            826..941
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            942..980
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1016
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1101
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1273
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..1344
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1345..1431
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1432..1551
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1552..1765
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1766..1829
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1830..1986
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            1987..2179
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
     exon            2180..2453
                     /gene="Wdr93"
                     /gene_synonym="RGD1559862"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatagttact aaggcgacgc caagccacaa gacggtgtga gcaaagctga gttttacaag
       61 gtcggctctc gtggccttct ccagtctcgg tttccaggtt gaggcactga gtgggtcact
      121 cccctgcctc aggcgtccag gtgtccccag ctttgagttc ccagaaggtc tcggtgccaa
      181 cctctgcgat gtcatctttt aaaggaagtc aggctcagaa gccaaggttg tctgtgtttt
      241 ccaagggtcc actggagatt ccatctccaa ctgaggcaga ctggcctaag gatgatgaga
      301 aggattttgt cttcaaggac gtggatcaag aactggattc ccttcctcag ccttaccgaa
      361 tgatcaacaa gctgataaac catctgtttg accgctcatg ggaagttatt gaaaacagag
      421 aatcttttag ggaaaatgtg aagaactgga ctgtgcctgc catctaccct ccaactgcag
      481 aaatccagct cgacaaaatg cctggcggta tggctgtctc acaagactat ctgtttattg
      541 gaggacccaa aggattctca atctataatc tgcacaatta caaaaaaatg cttgttttgg
      601 agaagtttaa ggttgatgtt atttccatct gggccacaga tttggggaat gacgtactca
      661 ttgttcctgt ggatgaaatg ggtattgtta gattgtttta cttgtgtaaa gacagccttt
      721 atctcatcaa agccatcaat gaaacggatg acaccaccaa gcaaagcacc tgtgtaagga
      781 tggaagtctc tcagagcggg gactatgcag ctttcctctt ccaaggagct ggagatgtct
      841 ggctggaagt gtataagttg cccaaggaaa tttggctaaa agaagtggag cacccccaat
      901 tgactctaaa tcaaaagaaa aagcccaaac agctgcaact gaacactcct gaatctgctg
      961 ttacagaaag cacagaaaag agcttgggat caagtgtcag ccctaacaca acccaggact
     1021 taaacatttc ttttaaaagt gaccttaagt tgagtcttcc agtttttata atgaagatta
     1081 aaccacctaa gcccatagca ggcaccacat ttaaaagccc cttggaaatc tttgcaaagg
     1141 tggaggacta cttcgggcta ggctctgggc agaaccactt tatcaaggat gtgcagtggg
     1201 aacaacacat ggagatcttc tatgcctcct ataagaagca cctggaaggg gagtgggaag
     1261 aggagccact cagtatggcc accttccatt tcttctatac taactcctta acaaccacac
     1321 caacggatgt caagagctct tccggaacag catgtgtcct tggcatacac tggactggaa
     1381 gtcacaattt cttcctctat tcactgaaca aaactctgaa ggataaaact gattgtgaga
     1441 atgtgtggcc ctgtgctgcg cccatcgtag tgtctcagat cagcagcttc tcctcttacc
     1501 tggccctggc ctgtgaggat ggtgtgctca ttctgtggga cctggctcaa ggattcctct
     1561 ttggggtcat tgctctgcct gaaaaatgtt tctgccaaag cattcacttc ctccggttct
     1621 tcctggtgca caaaggacaa aatgtgtacc ctgactaccc agtgaagttt gaagttatgt
     1681 gtgtagtgct atgcactaat gcttccctcc acctggtgac agccagcggg accaaaggac
     1741 ccacaagcaa gttgcttgtt gacagcccta caatgtccac agaagaagcc atttatgctg
     1801 tggcaccagt cccagctttg cctggcatgg tgctaatctt ttccaggaac tgttctgtaa
     1861 gcctcatgga cgtggccaag gctgagacta tctgtgcctt ctcagccccg acatgccacc
     1921 caccagacat cccctggaag ccactgtttg ttgtgtctcc acaccatcca ttttttctgc
     1981 ttcatggagc ccgtccatat gacaatacca actctactca tgatcccaag aataccacag
     2041 attctgtttt ctattttaat tttgaggatt actcactcct ggaagatatc tccaaaaagt
     2101 gcaccgtttc tcaaaaggac ttagcatata gccaggtgtt gtcaatggag aaaagatacg
     2161 agcagttcct ccagaagagc ttccagaaga gccagatgaa agggcgtgag cagtggtcca
     2221 ggcttcggaa gtactccatc atgctccaga aagaaaactt aaagaagtga gcaccctgga
     2281 actccacagc ccctgcccag gatgccgaga ggtagaaaga ctgcaacaga gagccacagc
     2341 tcaaagcctg ggacctccat ggagccagca gagctgaggt atttagagga ccttcaaatc
     2401 ctgagtgtct catggagttt agatgccatt taaataaaca gactggccac tgc
//
