LOCUS       NM_001395636            4306 bp    mRNA    linear   ROD 08-APR-2024
DEFINITION  Rattus norvegicus WD repeat domain 86 (Wdr86), mRNA.
ACCESSION   NM_001395636
VERSION     NM_001395636.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4306)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.454877.1,
                                           SRR26643429.15100.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-451               JAXUCZ010000004.1  11316534-11316984
            452-593             JAXUCZ010000004.1  11323694-11323835
            594-1014            JAXUCZ010000004.1  11327262-11327682
            1015-1150           JAXUCZ010000004.1  11329765-11329900
            1151-1254           JAXUCZ010000004.1  11332667-11332770
            1255-4306           JAXUCZ010000004.1  11332881-11335932
FEATURES             Location/Qualifiers
     source          1..4306
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..4306
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /note="WD repeat domain 86"
                     /db_xref="GeneID:311956"
                     /db_xref="RGD:1566180"
     exon            1..451
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..1431
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /codon_start=1
                     /product="WD repeat-containing protein 86"
                     /protein_id="NP_001382565.1"
                     /db_xref="GeneID:311956"
                     /db_xref="RGD:1566180"
                     /translation="MGSSGSALRVCAGHRGGINWLSLSPDGQRLLTGSEDGTARLWST
                     VDGQCCALLQGHESYVTFCQLEDETAFTCSADCTIRSWDVRTGQCLQVYRGHTSIVNR
                     ILVANDQLFSSSYDRTARVWTVDKGQMSQEFRGHRNCVLTLAYSAPKDLPRDPCLEAA
                     MGGGLLVTGSSDDTAKVWQVASGCCHQTLRGHTGAVLCLVLDVSSHTAFTGSTDATVR
                     AWDILSGEQLRVFREHQGSVICLELTDRLLYSGSADRTVKCWLADTGERVCTFSAHRH
                     SVSALKYHAGTLFTGSGDACARAFDAQSGVLQRVFRGHTFVINCLQVHGQVLYTASHD
                     GALRFWDVRGLQSVPPLPRRPSAKRSLSRLFSNKVACAAPGPLQPA"
     exon            452..593
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /inference="alignment:Splign:2.1.0"
     exon            594..1014
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /inference="alignment:Splign:2.1.0"
     exon            1015..1150
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /inference="alignment:Splign:2.1.0"
     exon            1151..1254
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /inference="alignment:Splign:2.1.0"
     exon            1255..4306
                     /gene="Wdr86"
                     /gene_synonym="RGD1566180"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attctgccgg cttcagacct ggtgggcgca ccccgaggca gaggcgccca cccctcctga
       61 gccccgagaa agttctgagt aggggaggtc tcacctgtat cggagctgaa ggaccggtgg
      121 agagtaagag tccttgtccc catccgcatc tcgagccttt gcacgaatgg gaagcccggg
      181 ctcccctgcg atggccactg ctcggccgag ccccgccagg gccacaagcg gactctggag
      241 ctctgctcgc tagccaagcg cagtacctct ctttactccg gatccgcaat ggggagcagc
      301 ggatcggcgc tgagggtctg tgcgggccac cgcgggggca tcaactggtt gagcctgagc
      361 ccggatgggc agcgcctgct gaccggcagc gaggacggca cggcccgcct ctggagcacc
      421 gtggacggcc agtgctgcgc gctcctgcaa ggacatgaga gctatgtgac tttctgccaa
      481 ctggaggatg agactgcctt cacctgtagt gctgactgca ccatccggag ctgggacgtg
      541 aggactgggc agtgtctgca ggtgtaccgg gggcacacat ccattgtgaa caggatccta
      601 gttgccaatg accagctctt cagcagttcc tacgaccgga cagctcgtgt gtggactgtg
      661 gataaaggac aaatgtccca agagttccgg ggccaccgta actgtgtact gacactagcc
      721 tactctgctc ccaaggacct gcccagagat ccctgcttgg aagcagccat gggtggtggg
      781 ctcctagtga ctggcagctc cgatgacaca gccaaggtgt ggcaggtggc cagtggctgc
      841 tgccaccaga cacttcgggg ccacaccggt gcagtactgt gcttggtgct ggatgtctcc
      901 agtcacacgg ccttcacagg cagcactgat gccaccgttc gtgcttggga catcctgagt
      961 ggggagcagc tacgggtttt ccgggagcac cagggctctg tcatctgtct ggagctcaca
     1021 gatcgactcc tgtactcggg cagtgcagac aggactgtta agtgctggct ggctgacact
     1081 ggggagaggg tgtgcacctt ctcagcacat agacacagcg tgagcgccct caagtaccac
     1141 gcaggcacct tgttcacagg cagtggggac gcctgcgccc gggcctttga tgcccagtca
     1201 ggagtgctgc aaagggtgtt ccgaggccac accttcgtca tcaactgtct ccaggtacac
     1261 ggccaggtgc tctacacagc atctcatgat ggtgctctgc gcttctggga cgtacgtggt
     1321 ctccagtcag tgccaccttt gccacgcagg ccatcagcta agcgcagcct gtcacgcctc
     1381 ttcagcaaca aggtggcctg tgcagcccca gggcccctac aaccagcctg agggcctgga
     1441 gaggggacga gggaccgagg gaggcgtggc ttgttttgca gtggcctgta gcagggcatg
     1501 tacctggcct tgtgaccttt ctcactgtgg aggaagggaa ggtgcttctt gccctcactc
     1561 tgaatcaaag gccttgctac ctggatactt ctagccaagg cagggcctcc agctctcata
     1621 gctgaacccc atgctcacag gctctctcag ctgagagaaa atggggactt cttacaaaaa
     1681 ccacggagct agactgttac ggtggcaaat gatgaagaac tcaaatacac gctctaagtg
     1741 ctccaagtcg tctttgttga cttccttttg gaggctgctg ccacagctgt gacctccaac
     1801 acctggacgg tcatctccct cctaagaggg cttatgaagc aaggtcatct gtacagcagt
     1861 ggccttagga aaggacagga agcaagggac cagctcttca accagcctgt ttgacaggag
     1921 gtccttctac cctggagcac ccgccacttc tggagattat tccatgagtt ctcttctgtc
     1981 agtctggagt tgaacagctg ggcagaagca tctggtctta tgcagaaatg ataatagtat
     2041 gccagatgtg gtggactcat cgacacccgt aggagccatg cgggctggag atatggctcc
     2101 gtggctgaga gcatgcactg ttcctacaga ggacaggagt ttgatgtcta gctcctgtgt
     2161 tgagctgtca gggccatcag taactctagt tccagcacag caaacgccct cttctggcct
     2221 ccaacgcact tgcacccaca atacacagac acacatacaa tttaaaagtt aaagatatat
     2281 ttttcctatt gatttattga ttgagacagg gtttctctgt gtagccctgg atgtccagca
     2341 ttctctgtag accaggctgg ccttaaactc agagacccac ctgcctgtgc ctccctgtgc
     2401 taggataaaa ggtgcacacc actttttttt ttttttttaa actactgcta tcttccctag
     2461 atagaaccct tctaggaggg ctggcaggaa ggatgttctg actgtctgag cctccctcat
     2521 tgtggagctt gtgatgggtc gctgtatgtt ctggggaaag cactgggatg ttttgcattg
     2581 gtccagcaca gccattggtt tctacttctc cggctcggag accctggctt catgccgagg
     2641 atgtgagggg ccctgtgctc tgcaggttcc tggcagctgc aggctgcatg tgtgaagctg
     2701 ttagatgctg agccacaggt ccacggtgga cacaccagga gggagtgtag ttcagtggta
     2761 gagtgtttgc tcagcctttg agaggaagaa agcagggtga cacatgttta gctggccaga
     2821 ggaaggaacg ggaactttct atcagatgct tggctgcgag aacagactag tatgtgtgtg
     2881 accggggcag acatttaaca agtgacacga tcagcatcaa tgacaccaag cccaggacct
     2941 cgctgcacag ctttaggctg acttcgtccc ccataactat cattcatgcc tgccttgtcc
     3001 tccagcctct gggtgtcctg ccacatccag tctagtttcg gcctgctttg tggggctctg
     3061 tgaaaggtct tggtagcctt ttaccgtcat tcctctcctc acagcacagc ctcctggtgc
     3121 atccagaatc attgccctcc taaatcactc tctcctgtct ctctctctac cctgtccaga
     3181 acagaatttg taccaattct aagcccagcc cattggctgc tcactctcca ggttcagctc
     3241 tccggcatgg ccgcagcact tcccaggcca gagcatcttg ctggcagtgt ttgcccatgg
     3301 ccctccagtc ctgcgcacct ccgtgtaggt gcacacaggt agtcaggcct gctggcatgg
     3361 cagtgccacc ctggctttcg gtattctcca ctggcattca aacagtggga agccagcaag
     3421 cacagtggcg ccattcccag gacaattctt ggttgaccag tagtttcaag gcaacgcccc
     3481 tcacactgca cttgtgaaga cagactctgg tggcctgctt caaaaccctt ccctgagact
     3541 tgctcattcc tggtcgtacc cgaaccctga ttttccctgt ggatgctgga ggtagagccc
     3601 acaaaggccc cacacaggct ctgctgcaga accacactcc agcctccatg gtgcttttga
     3661 gggctacgca cccctcactc ccaacacaga atggaaagac gcatagacaa gcaggaagcg
     3721 actcagtgca ttagacggag acgaagacgc tcagtgcacc cacgtttatt cccatcagca
     3781 tcactcactt ccagagaaca gcaagggggc caccacgcct gacaacttag gttcagtccc
     3841 tggtatccgc acggtggaca gagaaccagt ttccacacag tctaacctcc agacttgtgc
     3901 tatggtatgt ttgtcccacc ccccacacaa acaactgtgt aattaaaaaa aaagctagag
     3961 acgatcatac ttgtccagtt tagtgggctg ccaaggctcc aggtgagatg aaaagctctc
     4021 aggaacagtc acacttggcc cacgccacat ctggctgcta ccatgcctgg gtgctggaag
     4081 gctatctgcc tggtccacac ccaggacgaa gcaagcaccg gctgacagcc cccttctgtg
     4141 agccagctac aggaaaccca gggacagccc cgagaaagca gaccgcattc tcaggttctt
     4201 ggctgacaat aagctttcag tctagagatg ctaattaaaa atgacttgct gtcgctagca
     4261 tttaaaactt ccatttaata aaagattttt cattttgtat gaggaa
//
