LOCUS       XM_006234876            3944 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus WD repeat domain 76 (Wdr76),
            transcript variant X4, mRNA.
ACCESSION   XM_006234876
VERSION     XM_006234876.3
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086021) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On May 13, 2024 this sequence was replaced by
            NM_001430425.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006234876.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3944
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..3944
                     /gene="Wdr76"
                     /note="WD repeat domain 76; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     32 long SRA reads, 3 Proteins"
                     /db_xref="GeneID:311361"
                     /db_xref="RGD:1309616"
     CDS             322..1950
                     /gene="Wdr76"
                     /codon_start=1
                     /product="WD repeat-containing protein 76 isoform X4"
                     /protein_id="XP_006234938.1"
                     /db_xref="GeneID:311361"
                     /db_xref="RGD:1309616"
                     /translation="MVQKKTDQKKTCRRVLTSKMKALSSKAESCLLKPALDSHTESSE
                     LEHKSISDPVTPSVDMESSDEDSAPGPDDFSGLSPYERKRMKNIRENANFFASLQLAE
                     SAARLRGMIKKNQPPESKRKRPKKKENEVGCRRSMRLLKVDPLGVSLPASLTQPTLVE
                     EETPMIPPGPLEMIPENQDDCSELFKASLKTWAEMSQTSNEKTKKGLSSIKSYKASLS
                     GMVVSEATIRKVTKGAISSVAIHPSGVRTLVAAGSKSGQVGLWDLTQQSEDGAYAFCP
                     HSQPVSCLSFSPTNPAHLLSLSYDGTVRCGDFSTAVFEEVYRNERNSLSSFDFLDDAS
                     TLLVGHWSGHLSLVDRRTPGTSYEKFINSSLEKIRTVHVHPLSRQYFITAGLRDVHVY
                     DVRCLKSGKSQPLISLTEHSKSIASAYFSPVTGNRVVTTCADCKLRVFDSSSLSSQFP
                     LVSTIRHNTITGRWLTRFQAVWDPKQEDCFTVGSMAHPRRVEVFHETGKNVHSFGGEC
                     LVSVCSLSVMHPTRYILAGGNCSGRLHVFMHQET"
     polyA_site      3944
                     /gene="Wdr76"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gggattgtgg gaaattggag gaacgctaag cgggccgctt aaagggccag actaaaattt
       61 gcgcgtcttc gtaggcaact ttcccgcctt caagcgttca agatttggaa gatccttctg
      121 gctgacagtt gctttttttg ggttttggtg aatgaatata aagaaaatga aaatattgca
      181 tatacttctc tgagaccgat acagattaca actagaagga aagcagctaa ggtttatctc
      241 tacccgtttt cgctcagcaa tcccaagcta ggcctgttta agttgtccaa atccccggtt
      301 gagaacaagt ctagcagtga aatggtccaa aaaaagacag atcagaagaa aacttgtaga
      361 agggttttaa cttcaaagat gaaggcctta tcttccaagg cagagtcctg cctgctgaaa
      421 ccggctttgg attctcatac tgaaagtagc gagctggaac acaagagcat ctcggatcca
      481 gtgactccta gtgtggacat ggagagcagc gacgaagaca gcgcaccagg cccggatgat
      541 ttttcaggat tgtcacctta tgagaggaag agaatgaaga acatcagaga aaacgcaaac
      601 ttttttgctt cccttcagtt agctgagtca gctgcaaggc tccgtggaat gataaagaag
      661 aaccagccac ctgaatcaaa gagaaagagg cctaagaaga aagaaaatga agtcggatgt
      721 cgaaggtcca tgcggttgtt gaaagtagac cctttgggag tttcattgcc agcatctcta
      781 acacagccaa cgctcgtaga agaagagact cctatgatac ctcctggacc cttagaaatg
      841 attcctgaaa accaagatga ctgcagcgaa ctgttcaaag cctctctgaa gacatgggca
      901 gagatgagtc agacaagtaa tgagaagacc aagaaggggc tatctagtat taaaagctac
      961 aaagccagtt taagtggtat ggtcgtcagc gaagccacta ttcgtaaggt gaccaaagga
     1021 gcgatctcct ctgtggctat ccatccatcg ggagtgagga ccttggtagc agctgggtcc
     1081 aagtctggac aagttggact ctgggatttg acccagcaga gtgaagatgg ggcgtatgcc
     1141 ttctgtcctc acagccagcc tgttagctgc ctttccttct cacccaccaa cccagcccac
     1201 ctactgtccc tgagctatga cggcactgtg cgctgtggcg atttttccac ggctgtgttt
     1261 gaagaggtgt acaggaacga gagaaatagc ctgtcctcct ttgacttctt ggacgatgcc
     1321 tctactctgc tagtgggaca ctggagtgga catttgtcac tggtggatag aaggacacct
     1381 gggacttctt acgagaagtt tataaattcg tctttggaaa aaatcagaac tgttcatgtc
     1441 cacccgttat ccagacagta ttttatcacg gcaggattga gggacgttca tgtttatgat
     1501 gtcaggtgcc tgaagtccgg gaaaagccag cctttgatct ccctgactga gcactctaag
     1561 agcatcgcct ctgcgtactt ctcccccgtt actggtaacc gagtggtgac cacatgtgct
     1621 gactgtaagc tcagggtctt tgacagcagc tccttatctt cccagtttcc tctcgtcagc
     1681 accatcaggc acaacactat cactgggagg tggctaacaa ggttccaagc tgtgtgggac
     1741 cctaaacaag aagattgctt cacagttggt agcatggccc acccacggcg ggtagaagtc
     1801 ttccatgaga cggggaagaa cgtgcattct tttgggggag agtgtcttgt atctgtgtgt
     1861 tccctcagtg ttatgcaccc tacacgatat attctagctg gaggtaattg cagtgggagg
     1921 ttacatgttt ttatgcacca agaaacctga gttatggggt agggtcaaca aactgttcca
     1981 attgctctgt agctaaggaa cctagagact tgttggactc aacttcgtgc atctgtctgg
     2041 tcatgtggca tacttagtaa atagagcatt gctttcccag ggagacctcc atgcagaatg
     2101 tgctaagatg ttccagtgca cttgtccgct tccagcactt ctaattaggc tgtacttttc
     2161 aaaattctaa cattctaaag ctttcagtgg tcattattaa ccttttgtgg cataatgaga
     2221 ccattttgat gcaatagtaa tctgtagatc tgtgatttac ttagtttggg gtaaatattt
     2281 atttctcaac actggactag gtcctaaaag gtcatctaat tatgaaacat tattgaactg
     2341 cagagactgt cccatgtttg acaagtattc tgctgactca taccccacct ttgaaactta
     2401 aatggttgtt ttgctttgtt cttgagactg gatcttgcta tgtacccgag gttagctttg
     2461 aacttagtcc ttctgcctca cttttccaag tgctaggact gtaggtatgt attacatgcc
     2521 cagccagaac ttagtttcat aagctaagag ctgtttttga gtccttgtat ctcagttcag
     2581 tgttacttga aatcccagaa tagtcactgg agaacagatg gcttctatga ctcgggccca
     2641 cttggagctc tgtcctctgc ctctgggtag ctcctgaaat ggcccgggac agcactgtgt
     2701 tttaactcac accattatct agggaataac tgtacagact gcgctccaga caaggggctt
     2761 gtagcttttc atgtgaaatt agtaacccca gtgtagtgac aattctgtca cttttaatcc
     2821 cacaatacag ggctgcttca gatagttcac agcaactgac tatgatttgc ctcgtgctct
     2881 aacaggggcg tgatttgtgc cagctgcaga cagtttctgc aactgtgtta agtatggaac
     2941 tctgggaact tctcagaggg tgtataactg ctagggcccc ggtagacagg gtggggtggt
     3001 tggtggtcat tcaggggcat tggttgtgat ttattagcac tcatgctcaa agaagcaaaa
     3061 ggaaagaaat taaattccgg gaccccccct cccatttctt tccttcccac ctctagcctt
     3121 tctctctcac ctagtgttgg gaggtcaagg gtgggggatg gataaagggt ggcaaagaga
     3181 acccacagag tagtaaagac cagctgcagt cctaaggtgg aataaaaaaa aattgagccc
     3241 cgagtgttgg gtgccacttc tatctggtct aattttttcc cttttgtttc ttctttgatc
     3301 acaacaaaca ataaccaacc aaccctcctg aacagccaat aaccactaac catcccttgt
     3361 ggggccctca catttataca ccctctgaaa agttcccaga gttccaaact tcacacaatc
     3421 gcagaaactg tctgcagccg gcaaaaccac gcctctgcta gagcaggagg caaatcgtag
     3481 tcagctgctg tgggtggtct gaagcagccc acatcccaca cccaggattg aaagaacata
     3541 ttcttatatt tctgtgttgt ctttaaagaa accaaaaacg atagaattct tatctactct
     3601 agcacttgag tagaggcagg agaatcagga gttcaaggcc aatgtggctc accttccctt
     3661 tccccaaatt aataaagcac acaaagtaaa attacaatat ttttattttt tagagggctt
     3721 taaaataaaa gtgagcttca tatgtatata tgtatatatg atatatgttt aaatatattt
     3781 tgctgaatca gtagcttggt atcacagtgt attcaacatt ttcccattat ttgccaaagt
     3841 tactactgaa ggacttataa ataccttaag cagtatgttt ggattgtaaa ggggaatact
     3901 caattgtacg tcagagaaat aaagtgatac gaattttcgt tgaa
//
