LOCUS       XM_006250343            3578 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus WD repeat domain 64 (Wdr64),
            transcript variant X1, mRNA.
ACCESSION   XM_006250343
VERSION     XM_006250343.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006250343.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006250343.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3578
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3578
                     /gene="Wdr64"
                     /note="WD repeat domain 64; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:689524"
                     /db_xref="RGD:1591103"
     CDS             246..3512
                     /gene="Wdr64"
                     /codon_start=1
                     /product="WD repeat-containing protein 64 isoform X1"
                     /protein_id="XP_006250405.1"
                     /db_xref="GeneID:689524"
                     /db_xref="RGD:1591103"
                     /translation="MDARDEKRFNLALQINNFKASLVDFNKLVEQTTAQKKEERAGLF
                     IPKEDAIDYDKFYASVQQIFGPEVKNQDVKCFYRKLCNNPDAAFDWCEIFGYFSTDED
                     PLASQMDEENMVFLVSRKQRIVISGSRRRDVIKCIVKVPQLDLLITASQKGLITVFNS
                     QMRVQTNTSVTDTSWITGCDYLGQLKRIVATTERTIIVWDYKAQGSSQEHYFVIKPMD
                     HCLLCVCVVPLADQLCRDDILLGDDGGFVTRFTVNSDDFGLKQAKTKKKLQTQVLDSK
                     NFKSIKRKLHNDWVMKIRFVPALNCFGSCSLDSVHSLVLESLKRIEDNLPVREFAMPR
                     GANSFCYCLKANVIVTGGDDKVLRLWHPNISTKPVGKLVGHMFSITEIVNNEKEQHVI
                     SLSSAKVFRVWDIQTLSVLQVFHDSQGGPGDMQIYAMVYDTNHGMLITGSSVIDMYPL
                     TRMIQDTKQVPHTHEREVNVMLYNKYFHQVLTICSESVIKVWELETGLQIYQILDPHG
                     FSIELTCATIDDSGFLFATGAYNGTVKLWDFGSGQEMKMMPEGKDWVEEEHALLRLFF
                     LKSQVKQQHFILALERNGTIKMVQGKEDDIILTVIWELPNAMPYLQYGSHIVHLKMST
                     KERAMGIPFPDVELIVQKSISQQTTSSTTNTDVNCIDVFQTEGFNLIVSGTLNGMIIL
                     WNFIAASVKEIYRPEDCFSTDPELDPKRFRINDIMFLFRIPECVRRSSQDSICSSTQC
                     DSSKGPQSSKGSKQSIHDTEVKGEQTDTGSEQQSVSKKQTASTSSAEPQPPLLVTAHE
                     DGHLRLWTLEGKLLKDMLPFTKHSAISLTTLYTDSCCRILLAGNVEGHVILCNIGSFM
                     DPPHDEKKFKQLLSWRAHSLEIVQVIYVEDKQLVLTASIDGSVRLWNSTSGHYCGYFG
                     QRRMFELSQISDFILPCDVNEYPVEIKEESKFTEKKQKYEYPLIFDRERWKKMSSMSL
                     LFKRSPPNPFEVQHDFKFFKSLSSPKIRRYALEGFMTENREAGIVFGSLPIYRVPSPT
                     SLRFLPLIGSEAQRDSLEGVHSKKKSTHGHGGSRRKSLKRNFVPQINLASSFFPTTNK
                     "
ORIGIN      
        1 ttcactatca cccctgcctc tatgaaatgc agcaggcctc agctttcctc ctgctaaccc
       61 tcctaggaac agctcttact ccttgttcct atcagacggg gataaaaaaa aaccagagga
      121 atgagaccta gggcaaacgt tgagatggca gagacatgtt ataagaacta gaagcttttc
      181 cgcattagca aatttgcagt attatttcct cctccgtgca gaaataagag accccttata
      241 tctgtatgga tgccagggat gagaagcggt tcaaccttgc actgcagatc aacaacttca
      301 aagcgtcctt ggttgacttc aataaactgg ttgaacagac cacagcccag aaaaaggaag
      361 aaagagcagg cctgtttatc cccaaagaag atgcaatcga ttacgataag ttttacgcct
      421 cggtacagca aatctttggc cctgaagtga aaaatcaaga tgtgaaatgt ttttacagga
      481 agctctgcaa caacccggat gcagctttcg actggtgtga gatctttgga tatttttcca
      541 ctgatgaaga tcctcttgct tcgcagatgg atgaagaaaa tatggttttt cttgtgtcta
      601 ggaaacagcg aattgtgatt tcaggcagta gacgacgaga tgtgatcaaa tgcattgtga
      661 aggtcccaca gctggattta ttgataacag catctcagaa aggattaata acagtcttca
      721 acagccagat gagggttcag accaacacca gtgttacaga tacctcctgg attaccggct
      781 gcgattacct cggccagcta aagcgaatcg tggccaccac agagaggacc attattgtct
      841 gggattataa agctcaaggg agcagccagg agcactattt tgtcatcaag cccatggacc
      901 attgcctgct gtgtgtgtgc gtggtacccc tcgctgacca gctctgcaga gatgacatcc
      961 tcctggggga cgatggtggg tttgtgacca ggttcacggt aaacagcgat gactttggat
     1021 taaagcaggc aaaaaccaag aaaaaattac aaactcaggt ccttgactct aaaaacttta
     1081 aaagcattaa aaggaagctg cacaatgact gggtcatgaa aatcagattc gttccagctc
     1141 tcaattgctt tggttcctgc tctttagaca gcgtccattc cttagttttg gaatccttga
     1201 agagaattga ggacaatttg cctgtcagag aatttgccat gccaagagga gccaacagtt
     1261 tctgctactg tttgaaagca aatgtgattg tcactggagg agatgataaa gtcctccggt
     1321 tgtggcaccc aaacatcagc actaagccag ttgggaagct ggtgggacac atgttcagca
     1381 tcacagagat cgtaaacaac gagaaggagc aacatgtcat cagcctctcc tctgcaaagg
     1441 tcttccgagt gtgggatata cagactctat cagtattaca agtcttccac gatagccagg
     1501 gaggaccagg agacatgcag atttacgcta tggtatatga tactaaccac ggcatgctca
     1561 tcacaggatc cagtgtaata gacatgtatc ctttgaccag gatgatacag gacaccaagc
     1621 aggttcctca cactcacgaa cgagaagtca acgtcatgct ctataacaag tacttccacc
     1681 aagtgctgac tatctgctca gagtctgtga tcaaggtatg ggaacttgag accggtctcc
     1741 aaatatacca aattctagac cctcatggct tcagtattga actgacctgc gcaactattg
     1801 atgacagtgg gtttcttttt gccacaggag catataatgg gacagttaag ttgtgggact
     1861 tcggcagtgg gcaggagatg aaaatgatgc ccgaagggaa agactgggtg gaggaggaac
     1921 acgctttgct gcgcctgttt ttcctcaagt cccaagtgaa gcaacagcac ttcatccttg
     1981 ccttggagcg caacgggact atcaagatgg tccagggaaa ggaagatgat atcatcctca
     2041 cggtgatatg ggagctgccc aatgccatgc cttacctaca atacgggagc catattgtgc
     2101 atctgaagat gtcaactaaa gaaagggcaa tgggcattcc tttcccagac gtcgagctaa
     2161 tcgtccagaa aagcatttct caacaaacta ctagttctac caccaatacg gatgtgaact
     2221 gcattgatgt atttcaaaca gaggggttta atttgatagt gtctggaacc ttaaatggca
     2281 tgattatctt atggaatttc atagcggcct ctgtcaaaga aatataccgg cctgaggatt
     2341 gcttctctac agatcccgag ttggatccca aacgctttcg aattaatgat ataatgttcc
     2401 tcttccgaat tcccgaatgt gtaaggagat caagtcagga ttccatatgc tcctcaaccc
     2461 aatgtgactc aagcaagggt ccacagagta gcaagggaag taagcaaagt atacatgaca
     2521 ccgaggtcaa aggcgagcaa acagacacag gatcagaaca gcagtcagtg agcaagaaac
     2581 agaccgcgtc caccagctct gcggaaccac agcctcctct cctggtcact gcacacgagg
     2641 atggacacct ccgtttgtgg acgttggagg ggaagcttct gaaagacatg ctgcccttca
     2701 cgaagcactc tgccatttcg ctgacgacac tgtacacgga ctcgtgctgc aggatactgc
     2761 tggctgggaa cgtggaagga cacgttatcc tttgcaatat tggttccttc atggatccac
     2821 ctcacgatga aaagaaattc aagcagctgc tttcctggcg tgcccattct ttagagattg
     2881 ttcaagtgat ctacgttgaa gacaagcagc tggtgcttac cgcctccatt gatggctcag
     2941 tgaggctctg gaattctacc agtggtcatt actgtgggta ttttggacaa cgaagaatgt
     3001 ttgaattatc ccaaataagt gacttcattt tgccttgtga tgttaatgag tatcccgtag
     3061 agattaaaga agagagcaag ttcacagaga agaagcaaaa atatgaatat cctttgatat
     3121 ttgaccgtga aagatggaaa aaaatgagct ccatgtcttt gcttttcaaa cgctcacctc
     3181 ccaatccctt tgaagtgcaa catgatttta aatttttcaa gtctctttct tctccaaaga
     3241 ttcgccgata tgctctggaa ggtttcatga cagaaaacag agaggcaggg attgtttttg
     3301 gttctctgcc tatatacagg gtaccaagtc ccacgagtct aagattcctt cccctcattg
     3361 gctctgaagc acaaagagat tcgttggagg gcgttcattc gaagaagaag agcactcatg
     3421 gtcatggtgg atcacggagg aaaagcttga aaaggaattt tgtcccacag ataaatctgg
     3481 cttcgtcctt cttcccaacc acaaacaagt gaagacgagg cctcagaact ggctgctgca
     3541 caggaggcca caaggtccaa tctagtcaat atgagaat
//
