LOCUS       XM_008758812            2630 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus WD repeat domain 27 (Wdr27),
            transcript variant X9, mRNA.
ACCESSION   XM_008758812
VERSION     XM_008758812.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008758812.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008758812.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2630
                     /gene="Wdr27"
                     /note="WD repeat domain 27; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     29 samples with support for all annotated introns"
                     /db_xref="GeneID:308222"
                     /db_xref="RGD:1309633"
     CDS             168..2417
                     /gene="Wdr27"
                     /codon_start=1
                     /product="WD repeat-containing protein 27 isoform X6"
                     /protein_id="XP_008757034.1"
                     /db_xref="GeneID:308222"
                     /db_xref="RGD:1309633"
                     /translation="MVFGNQIDPLLLCSASEDYIIMWNMDECREKALKGLTPRGTVLG
                     SPLQTVLCLRFSPDDRALAVCAGNKISMMDVEKQSVLVELKGHQGSVTAVEFCPWQAH
                     TLFSVSEDRSFKVWDFCVGSLIYSSSILTAYPLLNLLINEENQQLVTGSADGQLWIFS
                     LMEGHHYHCVAHVDLRKKKETFTTRRMMTEQYGLPEGHQYHCRYEVDKRGEAEATFPV
                     LNLAHCDLCLPDSQGGGLAPECTTCIWIGSSTALFILNLASFELEAALHLKEFQSLSV
                     QVAGSCAVMNEPISAKAVCILSSMFGSKIAVLEISLSALLSAQQCPRAGRMLSVLASS
                     CVLPTSPLYFGIIKEKFPKLANTKRHAVKSAVEHRPLVFHTKVKSSGYTSAPHMAMFS
                     PKTNIKHNNRRSSKYKNNYKCKEYSESFLPRNLIRQVAVAQAPVAVTCLQFSGDGQQL
                     ACGLGNHLSLVFDASLSGAPAAFSGHDGAVNTVCWSHDKRWLLSTARDRTLRVWSVPR
                     TEFVMLLAADAFPKPVASAQFYYMDTFILLSSGPEFCLLKYHIDLCRDDIRRYKPKSR
                     YKPIFRLPTTSAADITSLSAVNDFYSHIILTAGRDRTVEVFDLNAGCSAAVLAEVHSR
                     PVHRICQNKGSSFIAQQSLAYNLFLTTAVGDGVRLWDLRNLRCVRCFEGHPNRSYPCG
                     VAFSPCGKLMACGAEDRHAYVYEMGSSSFLYRLAGHTDTVTEVAFNPAASQLITATLD
                     GKLQLFVAE"
ORIGIN      
        1 agtgtagtca ggaagcgagg gcttttggga ctgactcggg cctaaggggt cggaagtgag
       61 gcaattccag gctctcgcga gaacggagca gctttcctgt aaccatagcg acgcggcatg
      121 cgttatggct tcttaccctc caaggacacc atcatttgat tactgctatg gtttttggaa
      181 atcaaataga tccacttcta ctctgctctg catcagagga ttatattata atgtggaaca
      241 tggacgaatg cagagagaag gcacttaaag ggttgactcc tcgagggact gtcttgggct
      301 cccctttaca aacagtgttg tgtttgcgat ttagtccaga tgatcgtgct cttgcagtgt
      361 gtgctggaaa caaaatatct atgatggatg tggagaagca gtctgtgctg gtagagctga
      421 agggccatca aggctcagtg acagcagtgg agttctgtcc ctggcaagca cacaccctgt
      481 tctctgtgtc tgaagacaga agttttaagg tctgggactt ttgtgtggga tccttgatat
      541 acagttcatc cattttaaca gcttaccctc tcctgaactt gcttattaat gaagaaaacc
      601 aacagctcgt caccggcagt gctgatggtc agctgtggat ctttagcttg atggagggac
      661 atcactacca ctgtgtggca catgtggacc taaggaagaa aaaggagact ttcaccaccc
      721 gaagaatgat gactgagcag tacggcctgc cagaaggcca tcagtaccac tgcagatacg
      781 aggtggataa aaggggagag gctgaagcaa cgttccctgt cctgaacctg gcgcactgtg
      841 acctctgcct gccggattcc cagggtggag gtcttgctcc tgagtgcacc acatgcatat
      901 ggattggaag ctcaacagct ctattcatat tgaacctggc aagctttgag ttggaagctg
      961 ctttacatct caaggaattt cagagcctga gtgtccaagt tgctgggtcg tgtgcagtga
     1021 tgaacgagcc catcagtgcc aaggcagttt gcatactttc atctatgttt gggagtaaga
     1081 ttgctgtatt ggaaatcagc ctgtctgctc tgctgagcgc tcagcagtgc cctcgtgcag
     1141 gaaggatgct ctccgtgctg gcaagctcct gtgtcctgcc aacttctcca ctgtattttg
     1201 gaattattaa ggaaaaattt cctaagcttg ccaataccaa acgacatgct gtgaagagcg
     1261 ctgtggagca caggcccctg gttttccaca ctaaagttaa gtcgtctggc tacacatcgg
     1321 caccacacat ggctatgttt tctccaaaga ctaacatcaa gcataataac agaagatctt
     1381 caaaatacaa gaacaattac aaatgtaaag agtactcgga gagtttccta cccagaaatc
     1441 tgatcagaca ggtggctgta gcccaggcgc ctgttgctgt gacctgtctg cagttctcag
     1501 gggatggaca gcagctggcc tgtggcttag gtaaccacct gtccctggtc ttcgatgcca
     1561 gcctttctgg agcaccggct gccttttcag gtcacgatgg agctgtgaac actgtctgct
     1621 ggagccatga caagaggtgg ctgctgtcta cagcccgaga ccggacactg agggtgtggt
     1681 cagttcccag gacagaattc gtgatgcttt tggctgcaga tgcttttccc aagccagtag
     1741 catctgcaca attctactac atggatactt tcatactgct gtcttctggc cctgaatttt
     1801 gtctgctgaa gtaccacatt gacctttgta gggatgacat acgaaggtat aaaccaaaaa
     1861 gcaggtataa gcctattttc aggctcccaa cgaccagtgc agcagacata accagcctgt
     1921 cagcggtgaa cgacttttat tcccacatca tactcacagc tggccgggac cggactgtgg
     1981 aagtttttga cctcaatgct ggctgcagtg ctgcagtgct agctgaagtt cattcacggc
     2041 ccgtccatcg catctgtcaa aataaaggat catcctttat agcccagcag tccctggcat
     2101 ataatctttt cctgactaca gctgttggtg atggggttcg cctgtgggac ttgaggaacc
     2161 tgaggtgtgt tcgctgcttt gaagggcatc caaaccgctc ttacccttgt ggagttgctt
     2221 ttagtccttg tggaaagctc atggcttgtg gtgcagagga cagacatgct tacgtgtatg
     2281 aaatgggctc gagcagcttt ttgtaccgtc ttgcgggaca cacagataca gttactgaag
     2341 tggccttcaa cccggcagct tctcagctta tcacagccac cttagatggg aaacttcagc
     2401 tatttgtggc tgagtgacag ctgacctgct ggtaagaata caagaagaaa ggagagaaag
     2461 aatccatggc ttagctattt gaagtggacg ggcagtttcc ataggagacc cttgctggat
     2521 tcctcttctg taggactgac ccccatgtga gagtccctcc tcttaagaaa accttcatgg
     2581 gaatcctgga aatgatgttc ttcaataaag atgagccagt gcctctttca
//
