LOCUS       XM_008771249            4367 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus WD repeat domain 17 (Wdr17),
            transcript variant X1, mRNA.
ACCESSION   XM_008771249
VERSION     XM_008771249.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008771249.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008771249.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4367
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4367
                     /gene="Wdr17"
                     /note="WD repeat domain 17; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 11 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:364653"
                     /db_xref="RGD:1590843"
     CDS             240..4184
                     /gene="Wdr17"
                     /codon_start=1
                     /product="WD repeat-containing protein 17 isoform X1"
                     /protein_id="XP_008769471.1"
                     /db_xref="GeneID:364653"
                     /db_xref="RGD:1590843"
                     /translation="MAWMTYVSHWFEQDDWYEGLQRATMSQVRQVGLLAAGCQPWNKD
                     VCAANGDRFAYCATLAIYIYQLDHRYNEFRLHAIMAEHKKTITAISWCPHNPDLFASG
                     STDNLVIIWNVAEQNVIAKLDNIKETPACLSWCWNTGDAVAFVSQKGPLLIWTISGPD
                     SGVSVHKEAHGFVSDICIFRWHTQKKGKVAFGHTDGSISIFQPGSKNQKHVLRPESLE
                     GTDEDDPVTALEWDPLSTDYLLVANLHYGIRLLDSESLYCITTFSFPSAAVSVQCLAW
                     VPSAPGMFITGDSQVGVLRIWNVSRTTPIDSFKLKKAGFHCLHVVNSPPKRKFSVQSS
                     NKNHYMSSTSEAVPPPSLTRNQAFSLPPGHVVCCFLDGGVGLYDMGAKKWDFLRELGH
                     VETIFDCKFKPDDPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLN
                     CIAGATSRNGAFIWDIQKGKMIQRFNEHGKNGIFYIAWSHKDSKRIATCSGDGFCIIR
                     TLDGKLLHKYKHPAAVFGCDWSQNNKDMIATGCEDKHVRVFYVASSSNQPLKVFSGHT
                     ARVFHVKWSPLREGVLCSGSDDGSVRIWDYTQDACISILNGHTAPVRGLMWNTEIPYL
                     LISGSWDYTIKVWDTRGGVCLDTVYDHGADVYGLTCHPSRPFTMASCSRDSTVRLWSL
                     IPLITPLQINILADRPWEEIIGNTDNAIEQASPPLLCGKASKDIKQEVEKLTCNPRVK
                     KLRLFSECLSSPGGSDNLWNLVAVIKGQDDSLLPQNYYKGMMHLKHLIKFRTSEAQEL
                     TTIKMSKFGGGIGAPTKENKLKEAAEIHLRLGQIQRYCELMVELGEWDKALSVAPGVS
                     VKYWRKLMQRRADQLIQEDKDDVIPYCIATGDVKKLVNFFVSRGQLKEALLVAQAACE
                     GNMQSIHVSTPKGASYPDDVYKEDFNELLHKVINELAEWYFQDGRAVLAACCHLAVDD
                     IELAMAYLIRGNELELAVSVGTVLGEPAAPAMHYALQLLARKCMMIPMCFPSVVYRNL
                     AVDLLLMTPDREVHLIKLCAFYPGCIEEINDLHKKCNLPPAEECIQLAETAQADGNVY
                     ETIKYYLLSQEPEKALPIGIDFVKGCISNSNWTLDTVHPVLDLMTYIRTEKLLLHTCT
                     EARNELLILCGYIGALLAIRRQYHSIVPALYEYTSQLLKRRVVSVPLKIEHLSEELDA
                     WRACTQSTKQLSEDSPYVPPSDSQRTVYETLLKRLKEEPLKGITGPDYVTGTNLPSHS
                     DIHISCLNGLKIQGPVYFLEDGKSAISLNDALMWAKVNPFSPLGTGIRLNPF"
ORIGIN      
        1 gtccgcccca cccggcaatg tagagggtgg gcggaacccg ccgctggctc agggatgttc
       61 agggtcgccc cgcccctgag agctgagtgg gcggcgagga gggcgtggcc ggtgcgcggg
      121 ccggggcggt ccctttggct ggtcctgctt cagtacctgc tgctatccaa agctgcagcc
      181 gctgtctcct ccaggcgctg attattctcc agctgacttg attaaagcgc aagcaatcta
      241 tggcttggat gacttacgtt tcccattggt ttgagcagga tgactggtat gaaggactac
      301 aaagagcaac catgtcccag gtcaggcaag tgggactgct ggctgctggc tgccagccat
      361 ggaacaaaga cgtttgtgct gccaatggag accgatttgc atactgcgca accctggcca
      421 tctatatata ccagttggat caccggtata atgaattcag acttcatgca attatggcgg
      481 aacataaaaa aacaatcacg gcaatttcct ggtgtcctca taacccagac ctgtttgcaa
      541 gtggcagtac tgataactta gtgatcattt ggaacgtggc agagcaaaat gtcattgcca
      601 aactcgacaa catcaaagag acacctgcct gtctcagctg gtgctggaac acaggtgatg
      661 ctgtggcatt tgtttcccag aagggtcctc tgctcatttg gaccatctca ggaccagata
      721 gtggagtgtc cgtacacaaa gaagcacatg gttttgtgtc tgatatttgt atatttaggt
      781 ggcacaccca aaagaaagga aaggttgcat ttggtcatac tgatgggagc atatcaattt
      841 ttcagcctgg tagcaaaaat cagaaacatg ttctgagacc tgaatctctt gaaggaacag
      901 atgaggatga tccagttaca gccctggagt gggacccact atccacagat tatcttctgg
      961 tggctaattt acattatgga attcgtctac tagattctga atctctttac tgcatcacaa
     1021 cgtttagttt tcccagcgct gcagtgtctg tgcaatgctt agcctgggtt cccagtgctc
     1081 caggcatgtt tataactgga gattctcaag tgggtgtttt acgcatttgg aatgtttcaa
     1141 gaacaacacc tatcgatagt tttaagttaa agaaagcggg attccactgc ttacatgtcg
     1201 ttaattctcc tccaaagaga aaattttcag tccagtcttc aaacaaaaat cactatatgt
     1261 cttcaacaag tgaagcagtc ccacccccga gtttgacacg gaatcaagca ttttctcttc
     1321 cccctggtca tgtcgtgtgc tgtttcctgg atggtggagt tggactttat gacatgggag
     1381 ccaagaagtg ggatttcctc agagaactgg gacacgtgga aactatattt gactgcaaat
     1441 tcaaacctga tgatccgaat cttttagcaa cagcttcatt tgatggcact ataaaagtgt
     1501 gggatataaa cacattaact gcagtgtata cttctccagg gaacgaaggg gtaatttttg
     1561 ctctttcatg ggctccaggt gatttaaatt gcatcgctgg tgcaacttcc agaaatggcg
     1621 cttttatttg ggatattcaa aagggcaaaa tgatacagcg atttaatgag catggaaaaa
     1681 atgggatatt ctatattgcc tggagtcata aagattctaa acgaatagca acctgcagtg
     1741 gtgatggttt ttgcatcatt cgaacacttg acggtaaact actacacaag tacaaacacc
     1801 cggctgcggt gttcggctgt gattggagcc aaaacaacaa agacatgata gccactggct
     1861 gtgaagataa acacgtccgt gtcttttatg tagccagcag ctctaaccag cctttgaaag
     1921 tatttagcgg gcacacggcc agagtgttcc atgtcaagtg gtctcctctg agggaaggag
     1981 ttctctgcag tggttctgat gatggctctg ttcgaatctg ggactatact caagatgctt
     2041 gcatcagcat tcttaatgga cacactgcgc ctgtgagggg attaatgtgg aacactgaga
     2101 tcccatacct actaatatct ggaagctggg actacactat caaagtgtgg gacacccgag
     2161 gaggagtttg cctcgacacc gtgtatgatc acggtgcaga tgtgtatggt ttaacttgcc
     2221 atccaagtcg tcccttcacg atggcatcct gctcccgaga ttctacagtg agactctggt
     2281 cattaatacc tttaatcacc cctttacaaa taaacattct ggcagacaga ccttgggaag
     2341 aaattatcgg gaacaccgat aacgcgatag aacaagcctc tcctccacta ctgtgcggga
     2401 aagcatcaaa agacattaaa caagaagtag aaaaactaac gtgcaaccct cgggtgaaaa
     2461 aactaagatt gttttcagaa tgcttatcgt ctccaggtgg cagtgacaat ttgtggaatt
     2521 tggtggctgt tattaaaggg caagatgaca gcttgcttcc tcagaactac tacaaaggaa
     2581 tgatgcattt gaaacacctc atcaaattta gaacatcaga agcccaagaa ctaacgacaa
     2641 tcaagatgtc taaatttggt ggtggtattg gtgcacctac taaggagaat aaactgaagg
     2701 aagctgctga gatccacctg agattaggac aaattcagag atactgtgaa ctcatggtcg
     2761 aacttggaga gtgggacaaa gccctatcag ttgcacccgg tgtctctgtg aaatactgga
     2821 gaaagttaat gcagaggaga gctgaccaat taattcagga agataaggat gatgttattc
     2881 catactgtat agccactggt gatgtgaaaa aactcgtcaa tttttttgtg tccaggggtc
     2941 agcttaaaga agctctgctt gttgcacagg ctgcctgtga gggaaatatg caaagcatac
     3001 atgtttccac accaaaggga gcttcatatc ctgatgatgt ctacaaagaa gactttaatg
     3061 aactcttgca caaagtcata aatgagctgg cagaatggta ttttcaggat ggccgagcag
     3121 tgttggctgc atgctgccat ctcgctgtag atgatattga gcttgctatg gcatacctga
     3181 tccgtgggaa tgaactagag ctggcggtct cagtgggcac tgtcttagga gaacctgcag
     3241 ccccagcaat gcactatgcc ctgcagttac tggcaagaaa atgcatgatg attccaatgt
     3301 gcttcccatc cgttgtatac aggaacttgg cagttgatct tctcctgatg actcctgata
     3361 gggaagtaca tttaataaaa ctctgtgcct tctaccctgg gtgcatcgaa gaaataaacg
     3421 accttcacaa aaagtgcaat ctacccccag cagaagaatg cattcagttg gctgaaaccg
     3481 cccaggcaga tggcaatgta tatgaaacca taaagtatta tttactaagt caggaacctg
     3541 aaaaggctct tcctattggt attgactttg tcaaaggatg tatcagtaac tccaactgga
     3601 ctctagatac tgttcaccct gtgcttgacc taatgactta tatccgtact gaaaaattac
     3661 tcttacatac atgcactgag gctcgaaatg aattacttat attatgtggt tacattggtg
     3721 ccttactggc tatcaggaga cagtatcaca gcattgttcc agcactttat gagtacacaa
     3781 gtcagctatt aaaacgtcga gtggtgtcag tacccttgaa aattgagcat ctctctgagg
     3841 aactggatgc atggagagct tgcacacagt ccaccaaaca attgtcagaa gattctccat
     3901 atgtaccccc ttctgattca caaagaacgg tttatgaaac tttattaaag agactaaaag
     3961 aagagccgct caaaggaatt actggaccag attatgtgac tggaacaaat cttccaagcc
     4021 attcagacat tcatatttct tgtcttaatg gattaaaaat ccagggtcct gtgtattttc
     4081 tggaagatgg gaaatcagct atttctttga atgatgctct gatgtgggca aaggtgaatc
     4141 cattctcacc tttaggaact ggaatacgcc tcaatccatt ttgactgaag atttttctcc
     4201 acacttagta gtttttgtaa aaaggaaatt tggggtattt attaccttca ttttggttgt
     4261 ccaaaaacaa taggttggga ggaggtttga tagttagaag acatgaggaa ataatagtaa
     4321 attttgttaa tttcaaaaat aaagtattta tgtaattata aacaaaa
//
