LOCUS       NM_001398749            3828 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus WD repeat domain 13 (Wdr13), transcript variant
            2, mRNA.
ACCESSION   NM_001398749 XM_006256719
VERSION     NM_001398749.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Singh,V.P., Lakshmi,B.J., Singh,S., Shah,V., Goel,S., Sarathi,D.P.
            and Kumar,S.
  TITLE     Lack of Wdr13 gene in mice leads to enhanced pancreatic beta cell
            proliferation, hyperinsulinemia and mild obesity
  JOURNAL   PLoS One 7 (6), e38685 (2012)
   PUBMED   22715406
REFERENCE   2  (bases 1 to 3828)
  AUTHORS   Price,M., Lang,M.G., Frank,A.T., Goetting-Minesky,M.P., Patel,S.P.,
            Silviera,M.L., Krady,J.K., Milner,R.J., Ewing,A.G. and Day,J.R.
  TITLE     Seven cDNAs enriched following hippocampal lesion: possible roles
            in neuronal responses to injury
  JOURNAL   Brain Res Mol Brain Res 117 (1), 58-67 (2003)
   PUBMED   14499481
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Dec 22, 2021 this sequence version replaced XM_006256719.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.867462.1,
                                           SRR26360190.2192184.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-250               JAXUCZ010000021.1  17034815-17035064
            251-491             JAXUCZ010000021.1  17035736-17035976
            492-601             JAXUCZ010000021.1  17036750-17036859
            602-732             JAXUCZ010000021.1  17036979-17037109
            733-1040            JAXUCZ010000021.1  17037776-17038083
            1041-1221           JAXUCZ010000021.1  17038841-17039021
            1222-1363           JAXUCZ010000021.1  17039112-17039253
            1364-1482           JAXUCZ010000021.1  17042846-17042964
            1483-3828           JAXUCZ010000021.1  17043337-17045682
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq12"
     gene            1..3828
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /note="WD repeat domain 13"
                     /db_xref="GeneID:317370"
                     /db_xref="RGD:1560982"
     exon            1..250
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     CDS             210..1667
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /note="isoform 2 is encoded by transcript variant 2; WD
                     repeat-containing protein 13"
                     /codon_start=1
                     /product="WD repeat-containing protein 13 isoform 2"
                     /protein_id="NP_001385678.1"
                     /db_xref="GeneID:317370"
                     /db_xref="RGD:1560982"
                     /translation="MAAVWQQVLAVDARYNAYRTPTFPQFRTQYIRRRSQLLRENAKA
                     GHPPALRRQYLRLRGQLLGQRYGPLSEPGSARAYSNSIVRSSRTTLDRMEDFEDDPRA
                     LGARGHRRSVSRGSYQLQAQMNRAVYEDRPPGSVVPTSVAEASRAMAGDTSLSENYAF
                     AGMYHVFDQHVDEAVPRVRFANDDRHRLACCSLDGSISLCQLVPAPPTVLHVLRGHTR
                     GVSDFAWSLSNDILVSTSLDATMRIWASEDGRCIREIPDPDGAELLCCTFQPVNNNLT
                     VVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFSFLFD
                     MATGKLTKAKRLVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRVVDNEGA
                     LQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCVHFFDVERAAKAAVNKLQ
                     GHSAPVLDVSFNCDESLLASSDASGMVIVWRREQK"
     exon            251..491
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            492..601
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            602..732
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            733..1040
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1221
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            1222..1363
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            1364..1482
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
     exon            1483..3828
                     /gene="Wdr13"
                     /gene_synonym="RGD1560982"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccaggaaa ggcagggctg gggtgatgac cacgctatcg acccagtggg atttcgcgac
       61 atcacctgtg tggagggact tcgtatctat ggcaactgtc acctggtgga aggggcggaa
      121 ctagatttcc tctgcctgga acgctgacat tccaagccct tgccctgcag gctcccgcag
      181 gcagacgcac caaagaagga agccagggaa tggccgcggt gtggcagcaa gtcttagcag
      241 tggacgcgag gtacaacgcc taccgtacac caacgtttcc acagtttcgg acccagtata
      301 tccgccggcg cagccagctg ctgcgggaga atgccaaggc tgggcacccc ccagcactgc
      361 gtcggcagta cctgaggcta cggggccagc tattgggcca gcgctacggg ccactctctg
      421 agccgggcag tgctcgtgcc tatagcaaca gcattgtccg cagcagccgt actacccttg
      481 atcgaatgga ggactttgaa gacgatccca gagccctggg ggctcgagga catcgccgtt
      541 ctgtcagcag aggttcctac cagctacagg cacaaatgaa ccgtgcagtc tatgaggaca
      601 ggcctcccgg cagtgtggta cccacgtcgg tggcagaggc aagtcgggcc atggccgggg
      661 acacatcgct gagtgaaaac tatgcctttg caggcatgta ccatgttttt gaccaacacg
      721 tggatgaggc agtcccaagg gtgcgcttcg ccaatgacga ccggcaccgc ctggcctgct
      781 gctcactgga cggcagcatc tccctgtgcc agctggtgcc tgccccaccc actgtgctcc
      841 atgtgctacg gggccacacg cgtggcgttt cggacttcgc ctggtccctc tccaatgaca
      901 tcctcgtgtc cacctccctc gatgccacca tgcgcatctg ggcctccgaa gacggccgct
      961 gcatccgtga gatccctgac cctgatggcg ccgaattgct gtgctgtacc ttccagccgg
     1021 tcaacaacaa cctcactgtg gtggggaatg ccaagcacaa tgtacacgtc atgaacatct
     1081 ccacaggcaa gaaagtaaag ggtggctcca gcaagctaac aggccgtgtc ctcgccctgt
     1141 cctttgatgc ccctggccgg ctgctctggg caggtgatga ccgtggcagt gtcttctcct
     1201 ttctctttga catggccaca ggaaagctga ccaaagccaa gcgactagta gtgcatgagg
     1261 gtagccctgt aaccagcatc tctgcccggt cctgggtgag ccgtgaagca cgggacccct
     1321 cgttgctcat caatgcctgc ctgaacaaac tgctgctgta cagagtggtg gacaacgaag
     1381 gggcactaca gctgaagaga agcttcccca ttgaacagag ttcccaccct gtacgcagta
     1441 tcttctgccc cctcatgtcc ttccgccagg gggcctgtgt ggtaacaggc agtgaagata
     1501 tgtgcgttca cttctttgat gtggagcggg cagccaaggc tgctgtcaac aaactgcagg
     1561 gccacagcgc acccgtgctt gacgtcagct tcaactgtga cgagagtctg ctggcctcca
     1621 gtgatgccag tggcatggtc atcgtctgga gacgagagca aaagtagggt cctgttaccc
     1681 tgtgctgcct accaatccct tttccttcac tccagtcttg tgtcataaat taaattcctg
     1741 tggttgtgtt gaagagcaac tcccaggtct cccacaagga ggcactaggg agcactcagg
     1801 cctccagtgg aatggggacc agttcctcaa ttgtgcagta ctgtgttcgt tttgtccctt
     1861 caacaagcac ttactgagta tctgctgtga tgtgtcatat aagcatgcag tcagtagaca
     1921 ggaagggggg caccaactat gttgtcagga gctgttctga aaagtagggc ctcaaacccc
     1981 tatgggcttg catctcaata gtggcaaaaa gacaaaagta cagccattcc ttggtgtagc
     2041 atttgctttc taatttttca actttatgac tttttgacct ttcagtggta ccgaaccaca
     2101 cgcatctatc cagttttgtt tttctacttt cagtatggtg ttcagtaaat tacgtgaact
     2161 agtcaacact ttgttgtaaa gtagactttg cattaggtaa gtttgcctac ctgtagaaaa
     2221 atgtcagtgt tctgggcaca tttcaggtag gttacactaa gctagggtgt tcagtaggta
     2281 tatttgtgca ttttcaacat aagatagttc aagacagatt tgttggggta taaccctgtt
     2341 tgttcaagac acatctgtat ataataggat cgatagttaa agatgagtgc tgtgaagaaa
     2401 aacaaacgga ggagatagga gcttgcagga atgggagggg cggtagcttc ttggggcaat
     2461 gtcatcagga aacgtgttcc caacaggatg acattttaaa gagctgaatg aaataaggga
     2521 agtcataggg tagtgtagga gaacatcctt gtcaggaaga aaggttagat cagagactct
     2581 gagcctggag taggtcagag tgtgactggg tggagtgttc gagaggacat gagacacgtc
     2641 tttggggcat cttgggccat agtaagggag gaagctcaga gagcagtagg gaaattaggt
     2701 acagaatgtt aagttcaacc tcagggtttt caccagacta ggttgtgaaa cttgccaaca
     2761 ttagaagttt ctgtttgggt ggaccccaca cttaatctgt gcactgagtt gcgtcccaca
     2821 agcagtgagc agagtattga gttcttggcg tactagatta gcatgcagac agccatggac
     2881 tctggggcta aggcactgct cctgctgtgg ggtggaagaa ataggaaatc tctaagtcac
     2941 acctatctcc tctcatgtcc atccagggtc cgtatttcag tcctggacct gctcagagac
     3001 caaatactaa tgttcattat tgggtattgt ctaggaaata aattctcaga tcaccatcag
     3061 tggttaggtg atgaagaaat ttgaaggggc tcttacagct cctatatgct gctacatttg
     3121 taccaattga aactctggct aacatcttta gacctcagag tccccaacct ggtgagctgt
     3181 ggaactaaca gcagctcttt gagggaagaa gacaatttcc tatttatttc ctctcttgtt
     3241 taagagtatg gtcacttcca gccaaaagca tttctgactc catcagccag atcttaggtt
     3301 attagattag aatgtcagtg agctggactg gtcattgtag tcaaaatcag atgtgtgtgc
     3361 caacatccct aatccagctt tggggtcagt gatttttcta tgaggactgt aacttaacgc
     3421 agctggaagg tacagcaaag gctgccagac cgcagttaaa tgctaataat ctcttgagag
     3481 aacctgccaa ggttaacact tcagacctgt gcatttctgt accaaatgta tgcaccatgt
     3541 caaccaaggt ctgtagtagc aagagaattt gagtaaataa cggttttctc taactttctc
     3601 cttttcttca cactctccgt tttctttaat gagtctggtt ttgggatgat tggtgatgaa
     3661 taatattgtt tgcatgatgt ttggggagtt tacttcttgt gcaatttttg aggtggcaga
     3721 gttgacattt tatgttaaat tatcttggtg acacttttga ctcacaacct gaaggaaaat
     3781 aaacactgag caaacaagaa agaataaaaa ataatgttat tggtcaaa
//
