LOCUS       XM_006230424            4824 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus WD repeat domain 11 (Wdr11),
            transcript variant X1, mRNA.
ACCESSION   XM_006230424
VERSION     XM_006230424.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006230424.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006230424.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4824
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4824
                     /gene="Wdr11"
                     /note="WD repeat domain 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 60
                     ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 204 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:309016"
                     /db_xref="RGD:1587347"
     CDS             375..4049
                     /gene="Wdr11"
                     /codon_start=1
                     /product="WD repeat-containing protein 11 isoform X1"
                     /protein_id="XP_006230486.1"
                     /db_xref="GeneID:309016"
                     /db_xref="RGD:1587347"
                     /translation="MLPYTVNFKVSARTLTGALNAHNKAAVDWGWQGLIAYGCHSLVV
                     VIDSNTAQTLQVLEKHKADIVKVKWARENYHHNIGSPYCLRLASADVNGKIIVWDVAA
                     GVAQCEIQEHVKPIQDVQWLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYADN
                     ILSFSFDPFDPSHLTLLTSEGIVFISDFSPSKAPSGPGKKVYISSPHCSPAHNKLAAA
                     TGAKRALNKVKVLVTQEKPSAEFVALNDCLQLAYLPSKRSHMLLLYPREILILDLEVN
                     QTVGVIAIERTGVPFLQVIPCSQRDGLFCLHENGCITLRVRRSYSSICTTSSDEPDLD
                     PVQELTYDLRSQCDAIRVTKTVRPFSMVCCPVNENAAALIVSDGRVMIWELKSAVCSR
                     NARNSSSAVSPLYSPVSFCGIPGGVLQNKLPDLSLDNMIGQSAIAGEEHPKGSILQEV
                     HLKFLLTGLLSGLPSPQFAIRMCPPLTTKNIKMYQPLLAVGTSNGSVLVYHLTSGLLH
                     KELSVHSCEVKGIEWTSLTSFLSFAASTPNNMGLVRNELQLVDLPTGRSTAFRGDRGN
                     DESPIEMIKVSHLKQYLAVVFKDKPLELWDIRTCTLLREMSKSFPAITALEWSPSHNL
                     KSLRKKQLATREAMARQTVVSDAELGAVESSVISLLQEAESKSELSQNISAREHFVFT
                     DNDGQVYHLTVEGNSVKDSARIPPDGSMGSITCIAWKGDTLVLGDMDGNLNFWDLKGR
                     VSRGIPTHRSWVRKIRFAPGKGNQKLIAMYTDGAEVWDTKEVQMVSSLRSGRNVTFRI
                     LDVDWCTSDKVILASDDGCIRVLEMSMKSTCFRMDEQELVEPVWCPYLLVPRAALALK
                     AFLLHQPWNGRYSLDISHIDYPENEEIKTLLQEQLHALSNDIKKLLLDPEFTLLQRCL
                     LVSRLYGDESELHFWTVAAHYLHSLSQAKSGDTVVTKDGAPKDKLNNPLDICYDVLCE
                     NAYFQKFQLERVNLQEVKRSTYDHTRKCTDQLLLLGQTDRAVQLLLETSADNQHYYCD
                     SLKACLVTTVTSSGPSQSTIKLVATNMIANGKLAEGVQLLCLIDKAADACRYLQTYGE
                     WNRAAWLAKVRLNSEECADVLKRWADHLCSPQVNQKSKALLVLLSLGCFVSVAETLHS
                     MRYFDRAALFVEACLKYGAFGVSEDTEKLITAIYTDYARSLKSLGFKQGAVHFASKAG
                     AAGRDLLNELGSPKEEATEG"
ORIGIN      
        1 tggatggcag tggcagttgc cctaaattaa caaatcaaaa gcagaaaggc aaactaggac
       61 ttttattgtt ttgtttgcac gattttcagc catctttctc ccacaaggaa gaaagcagat
      121 gcggctgtag ctgaactgct ctaccatgtg tagcttcaac ctgcactccc tgggctcgct
      181 tgagtctcgg aactttggag agggaggaac ctagaagtcc tagatcctgg agagaggacg
      241 gactcttgga aggaggaacc tgggatccca cggaacctga ctgtggcgcg gacgcagcta
      301 cccggacttt ggaacggaag agctgcgcgt gtcgcttcct gcctggcggt ggggagggcc
      361 ggggcgccgc cgcgatgtta ccctacaccg tgaacttcaa agtgtcagcg cgcaccctca
      421 ccggggctct caacgcgcac aacaaggcgg cggtggactg gggctggcaa ggtttaattg
      481 cgtatggatg ccattcgctt gtggtagtga tcgattccaa tactgcccaa actctgcaag
      541 ttctagaaaa acataaagct gacattgtta aggtcaagtg ggccagggag aactatcacc
      601 acaacatcgg gtctccatac tgcctgcgct tggcttctgc tgatgtcaat gggaagatca
      661 ttgtttggga tgtagcagcg ggagtagctc agtgtgagat ccaagagcat gtcaagccca
      721 tccaagatgt gcagtggctg tggaatcagg atgcctcccg agatttactg cttgctatcc
      781 acccgccaaa ttacatcgtg ctttggaatg cagacactgg caccaaactc tggaagaaga
      841 gctatgcaga taacatcctt tctttttctt ttgacccttt tgatccttca catttaactt
      901 tactcaccag cgagggcatt gttttcatct cggacttctc tccatccaag gctccctccg
      961 gccctgggaa aaaagtgtac atctccagcc cacactgcag cccagctcat aacaagctgg
     1021 ccgcagccac aggagccaag agggctctta ataaagtaaa ggttttagtc acgcaggaga
     1081 aacctagtgc tgaatttgta gctctcaatg actgcctcca gttagcctat ctgccttcaa
     1141 aaaggagtca catgctgttg ctctaccctc gggagatttt aatccttgac cttgaagtga
     1201 atcaaacagt tggcgtgatt gcaattgagc gaacaggcgt tccctttctg caggtaatac
     1261 cgtgctctca gcgcgatggc ctgttttgcc tacatgaaaa tggctgcata accttacgtg
     1321 tccggaggtc ttatagcagc atctgcacca cttcaagtga tgaaccagat ctagatcctg
     1381 ttcaggagct tacctatgac ctgagaagcc agtgtgatgc aatcagggtg acgaaaactg
     1441 tccgtccctt cagtatggtg tgctgtcctg ttaatgagaa tgcagctgcc ctcatagtaa
     1501 gtgacggcag agtcatgata tgggaactca agtctgctgt gtgcagtcga aatgcacgga
     1561 acagtagttc tgctgtgtcc cctttatact cgcccgtgtc cttctgtggg atccctggag
     1621 gagtgctgca gaataaactc ccagacctct ccctagataa tatgattggg caaagtgcaa
     1681 ttgctgggga agagcatccc aaaggctcca ttctgcagga agtgcacctc aaattcctgc
     1741 tgacgggact gctctcagga ctcccctccc ctcagtttgc catccggatg tgcccaccac
     1801 tgaccacaaa aaacattaag atgtatcagc cactccttgc tgttggtaca agtaacggtt
     1861 ctgtcctggt gtaccacctc accagtggtc tgctacacaa ggagctaagc gtccactcgt
     1921 gtgaagtcaa gggtattgaa tggacaagct tgaccagttt cctttctttt gctgcttcaa
     1981 ccccaaacaa catggggtta gtaagaaacg aacttcagct ggttgatctc ccaacaggga
     2041 ggagcactgc gttccgtggt gaccggggca atgatgaatc acccattgaa atgatcaaag
     2101 tgtctcattt gaaacagtat ttggcagttg ttttcaaaga taagcccctg gaattgtggg
     2161 atattagaac ctgtactctt ctcagagaaa tgtctaagag cttccctgct ataactgcct
     2221 tggaatggtc accgtctcac aacctgaaga gcctgagaaa gaagcagcta gccacccggg
     2281 aggccatggc ccgccagact gtggtctcgg atgcagagct gggtgccgtt gaatcatctg
     2341 tgatcagttt attacaggag gcagaaagta agtctgaact cagtcagaac atctccgctc
     2401 gggaacattt tgtgttcact gacaacgatg gccaagttta tcatctcact gtcgaaggaa
     2461 attctgtgaa agacagtgct cggattccac cggatggtag catgggcagc attacctgca
     2521 tcgcttggaa aggggataca ttagtgcttg gagatatgga tggaaattta aacttctggg
     2581 atttgaaagg cagagtatcc agaggaatac ccacacacag aagttgggtg aggaagattc
     2641 gttttgcccc cggcaaggga aaccagaagc taatagcaat gtataccgat ggcgctgaag
     2701 tgtgggatac caaagaggtt cagatggtga gcagtttaag aagtggaaga aatgtgacct
     2761 ttcggatttt ggatgtggac tggtgcacgt cagacaaggt gatcttggca tctgatgacg
     2821 ggtgcatccg agtcctggag atgtccatga agtctacgtg tttcaggatg gatgagcagg
     2881 agttagtaga gccagtgtgg tgcccatacc tccttgttcc aagggccgcc cttgccttga
     2941 aagccttcct actacaccag ccttggaatg gaagatattc tctggacatt tctcacattg
     3001 attatccaga aaatgaagaa ataaagactc tccttcagga acagttgcat gcattgtcta
     3061 acgacataaa gaaactcctg cttgatcctg aattcactct cctgcagagg tgtctgctcg
     3121 tttccaggct ttacggtgat gagtcagagc tgcacttctg gacagtggcg gcccactacc
     3181 tgcacagcct gtcccaagcc aagtctgggg acacagtggt aacaaaggac ggtgctccta
     3241 aggacaagct gaataatcct ctggacatct gctacgatgt gctctgtgaa aacgcctact
     3301 tccagaaatt tcagctagaa agagttaatc tacaggaagt aaaacggtca acttatgatc
     3361 acacaaggaa atgcactgac cagctcctgc tgttgggcca gacagacagg gccgtgcagc
     3421 tgctgctgga gacaagtgca gataaccagc actactactg tgactcgctg aaagcttgct
     3481 tggtcaccac cgtcacctcc tcaggccctt ctcagagcac aattaagctg gtagcaacca
     3541 atatgatcgc caatggcaag ctggcagagg gcgttcagtt actctgcctg atagacaagg
     3601 ctgcagacgc ctgtcgctac ctgcagacgt atggcgagtg gaaccgggca gcatggcttg
     3661 caaaggttcg gttgaattct gaagagtgtg cggatgttct gaagcggtgg gctgaccacc
     3721 tttgttctcc acaagtcaac cagaagtcca aggccctcct ggtcctcctc tctctgggtt
     3781 gctttgtcag cgtggcagag acacttcaca gtatgagata cttcgataga gctgccttgt
     3841 ttgtggaagc ctgcctcaag tatggtgcat ttggagtcag tgaggacaca gagaagctca
     3901 tcactgccat ctatacagac tatgcccgaa gcctgaagag cctcggcttt aaacagggag
     3961 cagtgcattt tgcttcaaaa gctggagcgg ccggcagaga tttattgaat gagcttgggt
     4021 cccccaagga agaagcaaca gaaggttgac aggctgtgtg cgggaaatct ggtgttggaa
     4081 gcgaggtcta aggagagctg acttgactgt gcgcatggtc acagtcatgg tcagtccagc
     4141 ctgatacgag gacgtggccc ctgttagctg tgacaccacc ttcttaaggc tgcaggtgtg
     4201 cagcagcaag ggcacattta cactaggagc cagttctgtg tcctgtgtga cgtcaaaacg
     4261 ggggacacat ggtgggaagg cacatagtgt ttatactttt ggaaagtgct ttcaagatct
     4321 ctgtgaatac ttttcaattt ttgtaactta aaaattcaaa agactgaatc actgtccttt
     4381 ctcattagct aaatggaaga tgtttaagaa atctgtagcc agagattggg cagctgatgg
     4441 attttcagat acttgctgtg tgtgcctgtg ttgataagca gtctatagga cacagcaggg
     4501 cagaagcatt tgaagacagc ccaccacagc actttcttta tctcgagaac acagtggatt
     4561 ctttgcttga ggcactgctg agttttgtat tcggggctaa tagtcttcat ggagcacatc
     4621 taaactttat gtttagctta gtggtctgtg gtggtctgag ttttaactcc caggatacat
     4681 tccagtaacc tcatttctga agcctctttt gtacatttcc tgcctttgtc ttcttcccct
     4741 ggatgtaatt attataaatt attactcaga acttaaacat ctgtgactat aaaaatgata
     4801 aataaagaaa aatcccagcc aaga
//
