LOCUS       XM_039085162            1845 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus WW domain binding protein 2 (Wbp2),
            transcript variant X1, mRNA.
ACCESSION   XM_039085162
VERSION     XM_039085162.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085162.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1845
                     /gene="Wbp2"
                     /note="WW domain binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     ESTs, 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 246
                     samples with support for all annotated introns"
                     /db_xref="GeneID:192645"
                     /db_xref="RGD:620032"
     CDS             100..891
                     /gene="Wbp2"
                     /codon_start=1
                     /product="WW domain-binding protein 2 isoform X1"
                     /protein_id="XP_038941090.1"
                     /db_xref="GeneID:192645"
                     /db_xref="RGD:620032"
                     /translation="MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAFKG
                     TKKGTVYLTPYRVIFLSKGKDAMRSFMMPFYLMKDCEVKQPVFGANFIKGTVKAEAGG
                     GWEGSASYKLTFTAGGAIEFGQRMLQVASQASRGEVPNGAYGYPYMPSGAYVFPPPVA
                     NGMYPCPPGYPYPPPPPAEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVVSGPSAPPT
                     PAAEAKAAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPPEDKKTQ"
ORIGIN      
        1 tgattggctg actgtaatac gaacgacgcc actagaggcg ggccaaagac cagcgcaagc
       61 gcagggcatt gcgagtctcg ggacccctgt ggagagacta tggcgctcaa caagaatcac
      121 tcagagggcg gcggagtgat cgtcaacaac actgagagca tcttaatgtc ctatgatcat
      181 gtggaactta cattcaacga catgaagaat gtaccagagg ccttcaaagg gaccaagaaa
      241 ggcaccgtct acctaactcc ataccgggtc atctttctgt ccaagggcaa ggatgccatg
      301 cggtccttca tgatgccctt ctacctgatg aaggactgtg aggtcaagca gccggtgttt
      361 ggtgccaact tcattaaggg gacagtgaaa gctgaagcag gaggtggttg ggaaggctct
      421 gcctcctaca agctgacctt cacagcaggg ggtgccattg agtttgggca gcggatgctc
      481 caggtggcat ctcaagcctc cagaggtgaa gtccccaatg gagcctatgg gtacccttac
      541 atgcccagcg gggcctatgt ctttccccca ccagtcgcca atggaatgta cccctgccct
      601 cctggctacc cctatccacc gcccccaccc gcagagttct accctgggcc tcctatgatg
      661 gacggggcca tgggatatgt acagccccca ccaccaccct atcctgggcc catggagcct
      721 cccgtcgtca gcggccccag tgccccccct actcctgcag ctgaggccaa ggctgcagaa
      781 gccgctgcca gcgcctatta caacccgggc aacccacaca atgtctacat gcccacgagc
      841 cagccaccac caccacccta ctaccctcca gaagacaaga agacccagta gaccctgccc
      901 acctcctgcc tcttacctga agaccccttc ctgggcctcc catggagctg catctgggat
      961 tccaggaggc cagggaaggc cctgttcttc cccaggccta agtataaagt tagcaggagc
     1021 tagccctgat agaaaggtgg aactcctggc ctctgagagg gtcccagctt cccaccctag
     1081 ctcagctctc agcgctgttc tacccagcct ccctttaacc atctctggag ctcacaggag
     1141 cacggggtaa ccccttgttc ctcatgatag tggacacaca cacacacaca cacacacaca
     1201 cacacacaca gagggactct ctggccactc ctctactgct gtccagcccc ttgagcctgg
     1261 tgaccattgt tcttcatctc ttgggctcag aagaccagcc tcgtctccca caggccctgc
     1321 ccagtcatgt tcacattcct tccccttcct tccccccccc cccccccccc ccgcgtgtgc
     1381 ctggccctgg aaggccgctg tcccagcaga cagtcacact cacccggcct cgcttgttct
     1441 ttctgttgct tccagggatt ttacctggag cttccagtgg ctggcatcag aagcaaagcc
     1501 actgtggcag agaggaagcc cctctgcccc tccgcccccc tgcccctcca tccctccgct
     1561 ggtgtttctg gggattattc actctccttt tcccttcaca agggccttct ctgcaggagc
     1621 gatagagaat gcatgtctgc cccattgggc cttttggtct gggattcctc caaccacatg
     1681 acctataccc caagcccgcc tctccatgcg cttcgccccc tggatgcact aagagttgct
     1741 ctcgtttgtt cctggtctgg atgcaaaaca aggagatggt tatttaaaga gaattcctat
     1801 ttatttgaca caaaaagtcc agttaatata ttaatgtgaa ataaa
//
