LOCUS       NM_001109260            3252 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus vexin (Vxn), mRNA.
ACCESSION   NM_001109260 XM_001066686 XM_575752
VERSION     NM_001109260.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3252)
  AUTHORS   Moore KB, Logan MA, Aldiri I, Roberts JM, Steele M and Vetter ML.
  TITLE     C8orf46 homolog encodes a novel protein Vexin that is required for
            neurogenesis in Xenopus laevis
  JOURNAL   Dev Biol 437 (1), 27-40 (2018)
   PUBMED   29518376
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473984.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_575752.2, XM_001066686.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212229.1, FQ211566.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760396 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3252
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q11"
     gene            1..3252
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /note="vexin"
                     /db_xref="GeneID:500393"
                     /db_xref="RGD:1561849"
     exon            1..424
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /inference="alignment:Splign:2.1.0"
     CDS             358..981
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /note="uncharacterized protein C8orf46 homolog"
                     /codon_start=1
                     /product="vexin"
                     /protein_id="NP_001102730.1"
                     /db_xref="GeneID:500393"
                     /db_xref="RGD:1561849"
                     /translation="MHQIYSCSDENIEVFTTVIPSKVPSPSRRRVKSSQHLLAKNVVI
                     ESDLYPPPRPLELLPQRCERRDTGDRRWLQTGRLQTARPPGTHPTKTPARPVGISEPK
                     ASNLCGNRAYGKSLIPPVARISVKTPAVVEVTAKGSENGAALGRGSRHLKKITEEYPA
                     LPQGAEASLPLTGSASCGVPGILRKMWTRHKKKSEYVGATNSAFEAD"
     exon            425..480
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /inference="alignment:Splign:2.1.0"
     exon            481..643
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /inference="alignment:Splign:2.1.0"
     exon            644..705
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /inference="alignment:Splign:2.1.0"
     exon            706..797
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /inference="alignment:Splign:2.1.0"
     exon            798..3252
                     /gene="Vxn"
                     /gene_synonym="RGD1561849"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaagctgtg cgctaaccga gtaggcgaat tcacttcgtc acttcacaaa agacttccaa
       61 attcactgcg gcagacactg caaaataaaa atgttaagta catcctagct gagggggaga
      121 gatggaaggc tccgtgttca atcaaaggtt tgcaataata ggattcattt taaaataaga
      181 cagatgggat taggaaatgt tgctgcggtg agactgtcat gagaggcaca ggcagcctgt
      241 cttttgtgga cctgcacaat gatcccagag ccagactggc ttaggagacc ctgggactag
      301 ggctccagag agaggccatc ggctccggga caccctgcag ggcaggaggc ggagaccatg
      361 catcagatct acagctgcag tgatgagaat attgaagttt tcaccaccgt gatcccttcc
      421 aaggtgccca gcccgtccag gagaagagtc aagagctctc aacacctctt ggccaaaaat
      481 gtggtgatcg agtccgacct gtatccgcca ccgagaccgc tagagctgct gccgcaacgc
      541 tgtgagcgca gggacacagg cgaccgcagg tggctgcaga ctggccgact acaaaccgcc
      601 aggccacccg ggacccatcc cactaaaacc cccgccagac ctgtgggaat ttctgaaccc
      661 aaagcatcga atctgtgtgg gaatcgcgca tatggaaagt cattgattcc tccagtggcc
      721 aggatctcag tgaaaactcc agctgtggtg gaggtgacgg ccaagggctc agaaaatgga
      781 gctgctctgg gaaggggatc cagacacctc aagaagataa cagaagagta cccagccctt
      841 ccccagggag cggaagcctc gctgccatta acaggcagtg cttcctgtgg cgtccccggc
      901 atcctgcgaa aaatgtggac caggcacaag aagaagtctg aatatgtggg agccaccaac
      961 agcgcctttg aagccgacta aatgcgacct ttcgtgggcg ccttgctttg gcccaggttc
     1021 acaggaagat actagagttg aggactggga ctgagccacc ctcccctctg ctggttgctg
     1081 gtccaaacac atcatcattc cttactctgg catggggcat ggaaagttaa catcctcagt
     1141 agctagtagg aaagccattc ctcagaacta ctaaagccgt tggtcttaaa gtcaaattgg
     1201 ttgatacaaa tgttataacc ctatctttag gcaaaaccgt accaaaagca aagcttcctg
     1261 ggctttctga aagccctcca aggaaaacag aaggcagttg agctgtcttc tttgtgagtt
     1321 tctacaagac gtatggttcc tggtataaat gtaaaagttt gactctgagg tacttggaac
     1381 acagtggttc ttactttgcc catttcatgt ctgttttgcc ttggtgaaaa atgaaacgct
     1441 tcatctctac tttgttctaa tatctactta atggcagcca tcgtcgctct gcttagctaa
     1501 ccgtgggcac gactgcatga gctctcttct tttaggtgtg ttctttttta tagaaaagca
     1561 cctaaaatgt caatgttaac tttaatgttc aatactttgt gacgtggtac agttgaccag
     1621 ctttgtataa cgactttaac ccagagagct ttctcccatt gttgtctctt ctcaccacta
     1681 caaaacctct gctaagaaag cactgtggtc cccagcttac agatgaggac tctggagcat
     1741 ctggatggca gtatgtgaca gcaggttgtg ggactgtcac cagatctgag cttcactaaa
     1801 ataactaatt taagaaagtt tttaaatgga gagaatctga tgatgttgga acaaagaagt
     1861 gatttgaatg aaattcatca ttgtgcattt gataattaag acaggtgtag tcgcagagaa
     1921 cagggatccc tgtgtctcaa gagaatcgca tgtttgagac atgcctgagc agcctagcag
     1981 gaccctgact aaaaaacaaa acgaagtaca catgcacgtg caaatgcaca gagagagaga
     2041 gagacagaga cagagacaga gacagagaca gagagacaga gagacagaga gattaaatga
     2101 aaccagaaga aaccgccatt tttgtaggtt gaaacagctg aaaaatcaat tccctatggc
     2161 tcaaaccaat gacgtttact atcatttaaa aatgatcacg taaggaataa cggtaattga
     2221 aactattctt tgttaaatgc ctacctgccc tatgccaggc acaatgttga acacctcgca
     2281 tgaattaagc tactttctaa cagctaactt aggtgaattt gcccactgta tatgttgata
     2341 ctaattcaaa aagattaagt gattagattg aagtcaccac actctaggtg tccaacttcc
     2401 atgcccatat tacatcttct ccttcacaca aaatagggaa cagggaagga aggaaatcag
     2461 caaagaatct tcatctaaat gtcctgggag aggctgcctg gatcacagtg tggagatgag
     2521 gtatcaaagc ccggatactg atgagtggta tctgcctgtg gagtggtcgg taacgtagac
     2581 cttatatatt tctcatctgt ggcttacagt ctgcccctgg aagttttgtt ccctaattca
     2641 gaggtttaaa ttaatccaat cttcttaatg aaagcagaaa ctctgtgata aactgtaccc
     2701 taggattatg ttgagaatca ccaggtctta gcacaagaag gagtttaaac tgttcgggtc
     2761 tcaggcttgc ttctgatgct ctgtggactc tgctctcctg ttcccgatgc tctgggagaa
     2821 ctggaaaatg gcagtaggtc aaagatgaac ttccaggttc ttgctgtttg ctgctcttcc
     2881 accgctgctt tagaccctca gcacctgacc cctcatgtcc aaacaaagtc tggacacttg
     2941 agcatcaagt gctgtgtccc agtgaaccat ccaatgtcac atatgatatt aagttgggat
     3001 ccacaacaaa gttaggaaac aaacaggtca cagagtctcc aacgattgaa tttatttaac
     3061 ttaaaatcga tgtcttaaat gtgtgtgtgg cacctggaga tttattttac atgtagactg
     3121 ggactcattt atttatcatt gatttaaata tttcatgggg aaatgtttgc cttgtgtaga
     3181 acatttcatt tggccaactc aaataaaaat aaaggatgcc ttgttagtga cattaagtga
     3241 cttgaagatt gt
//
