LOCUS       NM_001271311            3560 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus von Willebrand factor C and EGF domains (Vwce),
            mRNA.
ACCESSION   NM_001271311 XM_003753385
VERSION     NM_001271311.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Lian,Z., Liu,J., Li,L., Li,X., Clayton,M., Wu,M.C., Wang,H.Y.,
            Arbuthnot,P., Kew,M., Fan,D. and Feitelson,M.A.
  TITLE     Enhanced cell survival of Hep3B cells by the hepatitis B x antigen
            effector, URG11, is associated with upregulation of beta-catenin
  JOURNAL   Hepatology 43 (3), 415-424 (2006)
   PUBMED   16496348
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Oct 13, 2022 this sequence version replaced NM_001271311.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760400,
                              SAMEA5760476 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-266               JAXUCZ010000001.1  216707351-216707616
            267-361             JAXUCZ010000001.1  216710055-216710149
            362-451             JAXUCZ010000001.1  216710232-216710321
            452-580             JAXUCZ010000001.1  216710979-216711107
            581-697             JAXUCZ010000001.1  216714273-216714389
            698-814             JAXUCZ010000001.1  216716959-216717075
            815-943             JAXUCZ010000001.1  216717816-216717944
            944-1365            JAXUCZ010000001.1  216719278-216719699
            1366-1459           JAXUCZ010000001.1  216719779-216719872
            1460-1542           JAXUCZ010000001.1  216721302-216721384
            1543-1630           JAXUCZ010000001.1  216723388-216723475
            1631-1716           JAXUCZ010000001.1  216725566-216725651
            1717-1834           JAXUCZ010000001.1  216726777-216726894
            1835-1920           JAXUCZ010000001.1  216727923-216728008
            1921-2017           JAXUCZ010000001.1  216729192-216729288
            2018-2100           JAXUCZ010000001.1  216730737-216730819
            2101-2191           JAXUCZ010000001.1  216731882-216731972
            2192-2274           JAXUCZ010000001.1  216732049-216732131
            2275-2338           JAXUCZ010000001.1  216732463-216732526
            2339-3560           JAXUCZ010000001.1  216737116-216738337
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..3560
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /note="von Willebrand factor C and EGF domains"
                     /db_xref="GeneID:309209"
                     /db_xref="RGD:1309910"
     exon            1..266
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     CDS             157..2949
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /note="von Willebrand factor C and EGF domain-containing
                     protein"
                     /codon_start=1
                     /product="von Willebrand factor C and EGF
                     domain-containing protein precursor"
                     /protein_id="NP_001258240.1"
                     /db_xref="GeneID:309209"
                     /db_xref="RGD:1309910"
                     /translation="MWARLLLHIAYILIPLLGSSARGHTGRKASGHYSAERRRLGPHV
                     CLSGFGSGCCPGWAPSMGSGHCTLPLCSFGCGRGICIAPNVCSCQDGEQGATCPEAHG
                     SCGEYGCDLTCNHGGCQEVARVCPVGFLMTETAVGIRCADIDECLSSSCEGHCVNTEG
                     GFVCECGPGMQLSADRHSCQDTDECLGTPCQQRCKNSIGSYKCSCRAGFHLHGNRHSC
                     IDINECRRPQERRICHHTCHNTVGSFLCTCRPGFRLQADRVSCEAFPKAVLAPSAILQ
                     PRQQPAKMSLLLPEAGRPALSPGHSPPPGAPGYPTGVRTISQPSATQAPPTFFATQLT
                     STPLPSSSPLGTLGPPSLLHREVVGTPSSPRGPESPKLGAGPSSCRHLGATYESGSRW
                     RQPGCSQCLCQDGEVTCGEVRCDSTCSHPIPPSEGGCCPSCTGCFHSGVIRAEGDVFS
                     PPEENCTVCVCLAGNVSCISPECPPGPCKASPQSDCCTCAPGRCYFHGRWYTDGAVFS
                     GGGDDCTTCVCQNGEVECSFTPCPELECPREEWLLGPGQCCFTCREPTPTTGCSLDDN
                     GVEFPIGQIWSPGDPCELCVCQADGSVSCKRTDCVDSCPHPIRVPGQCCPDCSAGCTY
                     TGRIFYNNETFPSVLDPCLSCICLLGSVACSPVDCPITCTYPFHPDGECCPVCHDCNF
                     EGRKVVNGQVFTLDDEPCTRCVCQLGEVSCETVPCQPVCTDSSCPDSLFPQEEKQQPS
                     PHGDLAKAARNPRGDTEVPVNCSSCPGPPSASPARPTSQLLKLLLRTNLSNVQSASPG
                     PPVAQASSSLLLDPQGTVLGKPGASRPSEPSGGAPVSPGLPTLPPAILGTPSSTVTPE
                     SSSSTFRVRTAFQWPLSTTRLTEAETPSVTDTDLSETLATSSRPQRLSATLLDTPNPV
                     PQQSTADTLKEEESTI"
     exon            267..361
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            362..451
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            452..580
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            581..697
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            698..814
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            815..943
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            944..1365
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1366..1459
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1460..1542
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1543..1630
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1631..1716
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1717..1834
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1835..1920
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            1921..2017
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            2018..2100
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            2101..2191
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            2192..2274
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            2275..2338
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
     exon            2339..3560
                     /gene="Vwce"
                     /gene_synonym="RGD1309910"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcctcccc taaacaccag ccctctcctc gtcgtcctca gccccctgcc agctgtgggg
       61 gaatcagatc gcttccagga ggagggacaa ggtccgtagc cccctccctg gtgcggggcc
      121 tgagcccagt agagtccagg acctctgctg ccagtcatgt gggctagact gttgctccac
      181 attgcctaca tcttgattcc gttgctgggg tcttcggccc gaggccacac cgggaggaag
      241 gcgtcagggc actactctgc ggagaggcgt cgtctgggtc cccatgtttg cctctctggc
      301 tttgggagtg gctgctgccc tggctgggcc ccttccatgg gcagtgggca ttgtaccctg
      361 cccctctgct cctttggctg tgggaggggc atctgcatcg cccccaatgt ctgctcctgc
      421 caggatggag agcaaggggc cacttgccca gaagcccacg gatcctgcgg ggagtatggc
      481 tgtgacctca cctgtaacca tggtggctgc caggaggttg cccgagtgtg ccctgtgggt
      541 ttcttgatga ccgagacagc tgttggtatc cggtgtgcgg acattgacga gtgtttaagc
      601 tcatcttgtg agggccactg tgtgaacaca gaaggtggct tcgtatgtga atgtgggcca
      661 ggcatgcaac tgtccgctga tcgtcatagc tgccaagaca ctgatgagtg cctgggaaca
      721 ccctgccagc agagatgtaa gaacagcatt ggcagttata agtgctcctg ccgggctggc
      781 ttccacctcc atggcaaccg acactcctgc atagatataa acgagtgtcg gcgaccgcag
      841 gagagaagaa tctgtcacca cacctgccat aacactgtgg gcagcttcct atgcacctgt
      901 agaccgggtt tcaggcttca agctgaccgt gtgtcttgtg aagctttccc gaaggccgtt
      961 ctggccccat ctgccatcct gcagccccgg cagcagcctg ctaagatgtc cctgctcctt
     1021 cctgaggcag gccggcctgc cctgtcccca ggacacagcc ctcctccagg ggccccagga
     1081 taccccactg gagttagaac catcagtcag ccatctgcca cccaggcccc acccacattc
     1141 tttgccacac agttgacatc caccccattg ccaagttcct ccccactggg gacccttgga
     1201 ccaccctcac ttctccacag ggaggttgta gggacccctt cctcacctag gggtcctgaa
     1261 agcccaaagc tgggagcagg gccctcttcc tgccggcacc taggagccac atatgaatca
     1321 gggagccgct ggaggcagcc cgggtgttct cagtgcttat gtcaggatgg agaggtgacc
     1381 tgtggagaag taaggtgtga ctctacctgt tcccatccaa ttcccccgag cgaaggaggg
     1441 tgctgcccct cttgcactgg ctgctttcac agtggtgtta tccgagctga aggagatgtg
     1501 ttttcacctc ctgaggagaa ctgtactgtg tgtgtctgtc tggctggaaa tgtttcttgt
     1561 atctctcccg agtgtccccc tggcccatgc aaggcttccc cacagtcaga ttgctgtacc
     1621 tgtgctccag ggagatgcta tttccatggt cggtggtaca cggacggggc tgtgttcagt
     1681 gggggtggtg acgactgtac cacctgtgtc tgccagaatg gggaggtaga gtgttccttc
     1741 acaccatgtc cagaactgga gtgccctcga gaggagtggt tgctgggccc aggacaatgc
     1801 tgttttacct gtcgggaacc cacacccacc acaggctgct ctctcgatga caacggggtt
     1861 gagtttccga ttggacagat ctggtcgcct ggtgatccct gtgagttatg cgtctgccag
     1921 gcagatggct ccgtgagttg taagaggaca gactgcgtgg attcttgccc tcaccccatc
     1981 cgggtcccag gacagtgctg ccctgactgt tcagcaggct gcacctacac aggcagaatc
     2041 ttctacaaca atgaaacctt cccgtcagtg cttgacccct gtctgagctg catctgcctg
     2101 ctgggctcgg tggcctgctc acctgtggac tgtcccatca cctgtaccta ccccttccac
     2161 ccggatggcg agtgctgccc tgtatgccac gactgtaact tcgaggggag aaaggtggtg
     2221 aatggtcagg tgtttacctt ggatgatgag ccttgtaccc ggtgtgtctg ccagctggga
     2281 gaggtgagct gcgagacggt cccttgccag ccagtctgta ctgactcctc ctgcccagat
     2341 tccctgtttc ctcaagaaga aaagcagcaa ccctcccctc atggagatct tgccaaagct
     2401 gcacggaacc cccgtggaga cactgaagtc cctgtcaatt gtagctcctg cccagggccc
     2461 ccatcagcat cacctgcaag gcccacgtcc cagctcctga agctgctctt aagaacaaac
     2521 ctgtctaatg ttcagtctgc atccccaggc cctccagtag cccaggcctc atcctcactc
     2581 ctgctggatc cacagggcac agtccttggg aagcctggag cctcccggcc cagtgagccc
     2641 tcaggagggg cacctgtctc tcctggactg cccactctac ctccagccat tctggggact
     2701 ccctcatcaa ctgtcactcc agaaagctct tcttcaacct tcagggttcg gacagcattt
     2761 cagtggcctc tgtctaccac ccgcttgact gaggcagaaa caccttcagt gactgacact
     2821 gacctctcag agacccttgc cacctcctcg aggcctcaaa gactctctgc aactctcctg
     2881 gacaccccta accctgttcc ccaacagtcc acagcagaca ccttgaagga ggaggaatct
     2941 accatctgag tgtatcacaa tgtctgggac atgccagata gaggtctctg ctgatggcct
     3001 agtatgtgca tggtcacagg ggtaaaattg gtggggtgtg cagagaagac attagaataa
     3061 gatattccat tataagtcaa agagagaggc accagaagaa ataacccacc cctggatttg
     3121 gacttttttt tttttttttg gttctttttt ttttttcaga gctggggacc gaacccaggg
     3181 ccttgcgctt cctaggcaag cgctctacca ctgagctaaa tccccaaccc tggctttgga
     3241 cttttagtct ccagaattgt gagaacataa atttccattt ggcccccgtc cttgtctgtg
     3301 ttgattccag tggccctggc atactaagcc aataacagtg cccaccctca ctcagacaga
     3361 gctatgccta gggtgagcct gtcagtgcat actcttgaca ttgacgtcat ataacatcta
     3421 tcctagaaat gtttttggag ggtctgttgt ctgtcattgt gctttatttt caacactgac
     3481 ttcatgtaat actcacctca agatgtgttc agagcatgtg ttatatcccc catctctaat
     3541 ttaaacactg ggctgctaaa
//
