LOCUS       NM_212499               4347 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus von Willebrand factor A domain containing 7
            (Vwa7), mRNA.
ACCESSION   NM_212499 XM_227995
VERSION     NM_212499.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4347)
  AUTHORS   Hurt,P., Walter,L., Sudbrak,R., Klages,S., Muller,I., Shiina,T.,
            Inoko,H., Lehrach,H., Gunther,E., Reinhardt,R. and Himmelbauer,H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
REFERENCE   2  (bases 1 to 4347)
  AUTHORS   Snoek,M., Albertella,M.R., van Kooij,M., Wixon,J., van Vugt,H., de
            Groot,K. and Campbell,R.D.
  TITLE     G7c, a novel gene in the mouse and human major histocompatibility
            complex class III region, possibly controlling lung tumor
            susceptibility
  JOURNAL   Immunogenetics 51 (4-5), 383-386 (2000)
   PUBMED   10803853
REFERENCE   3  (bases 1 to 4347)
  AUTHORS   Snoek,M., Teuscher,C. and van Vugt,H.
  TITLE     Molecular analysis of the major MHC recombinational hot spot
            located within the G7c gene of the murine class III region that is
            involved in disease susceptibility
  JOURNAL   J Immunol 160 (1), 266-272 (1998)
   PUBMED   9551980
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX883045.1.
            
            On Jan 9, 2008 this sequence version replaced NM_212499.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-188               BX883045.1         215145-215332
            189-434             BX883045.1         215621-215866
            435-716             BX883045.1         216290-216571
            717-813             BX883045.1         216978-217074
            814-924             BX883045.1         217613-217723
            925-1120            BX883045.1         218014-218209
            1121-1290           BX883045.1         218330-218499
            1291-1403           BX883045.1         219676-219788
            1404-1520           BX883045.1         220028-220144
            1521-1706           BX883045.1         221368-221553
            1707-1839           BX883045.1         222281-222413
            1840-1992           BX883045.1         222531-222683
            1993-2085           BX883045.1         222770-222862
            2086-2387           BX883045.1         223091-223392
            2388-2527           BX883045.1         223460-223599
            2528-2708           BX883045.1         223774-223954
            2709-4347           BX883045.1         224039-225677
FEATURES             Location/Qualifiers
     source          1..4347
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..4347
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /note="von Willebrand factor A domain containing 7"
                     /db_xref="GeneID:309611"
                     /db_xref="RGD:1303137"
     exon            1..188
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            189..434
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     CDS             204..2882
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /note="protein G7c; von Willebrand factor A
                     domain-containing protein 7"
                     /codon_start=1
                     /product="von Willebrand factor A domain-containing
                     protein 7 precursor"
                     /protein_id="NP_997664.1"
                     /db_xref="GeneID:309611"
                     /db_xref="RGD:1303137"
                     /translation="MLPVEVPLSQLGPPVLLLQLLLPPTSAFFPNIWSLLAAPGSITH
                     QDLTEEAALNVTLELFLEQPPPGRPHLHLEDYRGRTLLADDIFAAYFGSGFSSRRFRA
                     ALGEVSRANAAQDFLPASKSNPDLHFDAERLVQGRTRLEGALRETLVAARALEYTLAR
                     QRLGAALHALQDFYSHSNWVELGERQPHPHLLWPRRELWSLAQVGDPTCSDCEGLSCP
                     GNMMNLTMLTSGYFGTNPPKPPGKCSHGGRFDQSSSQPPRGGINKDSTSPSFSPHHRL
                     HLQAAEVALLASIEALSLLRSRLGTRGFSRLLDITPASSLSFVLDTTGSMGEEINAAK
                     IQARRIVEQRQGSPMEPVSYILVPFHDPGFGPVFTTSDPDSFWQKLTEIHALGGGDEP
                     EMCLSALELALLHTPPLSDIFVFTDASPKDAFLTNRVESLTRERRCRVTFLVTEDPSR
                     AQGRGRREALSPSRFEPYEAIALASGGEVIFTKDQHIRDVAAVVGESMAGLVTLPLEP
                     PIFTPGEPCVFAVDSLLSKVTVRMHGDISGFWIKSPAGLSQGPEEGIGPLGHTRRFGQ
                     FWTVTMTDPPQTGSWEIQVAAEGTPRVRVQAQTSLDFLFHFGISAEDGPHPGLYPLTQ
                     PVAGLQTQLLVEVTGLVSRQKLGDGQPQFSHAVLRRVSEGTHLGRVSLEPVGPPERGL
                     LAASLPPTLLSVSVPFSLELVGQDVGGQCLRRSAPQPCSVAPVLLELSGPPDFLTPGS
                     KAPLSLRVASFSGPQDVDLRSSVNPSFSLTSNLSRARLGLNESAWGCLWLEVPDSAAP
                     DTVVTVTVTVTAVGQGASQVPPTHAFLQLLVLAQSSKDQLEDPTHSAAPVLPPTTPAL
                     LPSTLVTRGRAGRGTTGKTWWGTVGGVLFLLGCTSW"
     exon            435..716
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            717..813
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            814..924
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            925..1120
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1121..1290
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1403
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1404..1520
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1521..1706
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1707..1839
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1840..1992
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            1993..2085
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            2086..2387
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            2388..2527
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            2528..2708
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
     exon            2709..4347
                     /gene="Vwa7"
                     /gene_synonym="C6orf27; G7c; NG37"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctggctttc gctacatcgt gtggccctgg gttggcatga atggaagagg gccaggggct
       61 gcctgtcctc aaccccttgc taagagcctc cctctcatgc tactgaggcc cagttaatta
      121 tagctctgac ctaagtgccc tgtgacgcca cacccgggcc agcactgccc aggagaccca
      181 gcaaccaggt ccatgtttca gccatgctcc ctgtggaggt ccccctgtcc cagctgggcc
      241 ccccagtact gctgctccag ctgctgttgc ccccaacatc tgccttcttt cccaacatct
      301 ggagccttct ggctgcccct ggctccatca ctcaccaaga cctgactgaa gaggctgcac
      361 tcaatgtcac ccttgagctc tttctggaac agccaccccc aggccgaccg cacctccatc
      421 tagaggacta caggggccgg accctcctcg ccgatgatat ctttgctgcc tactttggat
      481 cagggttttc ttcccggagg ttcagagcgg ctttaggaga ggtgtctcgt gccaatgcag
      541 cccaagactt cctgccagct tccaagagca accccgacct gcacttcgat gctgaacggc
      601 tggtccaggg gcgcactcgc ctggaggggg cccttcggga aaccctggtg gccgccagag
      661 cactagagta tacactggcc cgacagcgtc tcggggctgc actccatgcc ctgcaggatt
      721 tctatagcca cagcaactgg gtagagctgg gggagcggca gccacaccct cacctcctct
      781 ggccaaggcg ggaactctgg agcctggccc aagtgggcga tcctacctgc tctgactgcg
      841 aggggctgag ctgccctggg aacatgatga acttgacaat gctcacctct ggctacttcg
      901 gaacgaatcc ccccaaacct ccagggaaat gtagccatgg aggtcgtttt gaccagagca
      961 gctcccagcc accccgggga ggcatcaaca aggacagcac atccccaagc ttctccccgc
     1021 accataggct gcacctccag gctgcagaag tggcactgtt agcttccatc gaggccctca
     1081 gcctcctgcg aagccgcctg ggaaccaggg ggttctccag gctgctggac atcacccccg
     1141 cttccagcct gagcttcgtc ctggacacca caggcagtat gggcgaggag atcaatgcag
     1201 ccaagatcca ggctcgacgc atagtggagc agcggcaagg cagccccatg gagcctgttt
     1261 cctacatcct ggtgcccttc cacgacccag ggttcggccc tgtctttaca accagtgacc
     1321 ctgacagctt ctggcagaaa ctcaccgaga tccatgcctt gggaggtgga gatgagccgg
     1381 agatgtgctt gtctgccctg gagctagccc tgctgcatac acctcccctc tcagacatct
     1441 tcgtcttcac tgacgcctcc cccaaggacg cttttcttac caaccgggtg gaatccctga
     1501 ctcgggagag gcgctgcagg gtcacgttcc tagtaaccga agacccatcg agggctcagg
     1561 gtcgaggacg gcgagaggcc ttgtctcctt ctcgctttga gccatacgaa gcaatagccc
     1621 tggcatcggg gggagaggtg atctttacca aagaccagca catccgggat gtggctgccg
     1681 ttgttgggga gagcatggct ggtctggtga ctcttcccct ggagcctccc atcttcaccc
     1741 ccggggagcc ctgtgtgttc gctgtggaca gtctgctctc gaaagtcaca gtccgaatgc
     1801 acggggacat cagtggcttc tggatcaaga gccctgcagg gttgtcccag ggcccagagg
     1861 agggcatagg tcctctgggc cacactcgtc gctttgggca gttctggaca gtgaccatga
     1921 ctgacccccc tcagacaggg tcttgggaga tccaggtagc agctgaggga accccccggg
     1981 tgagagtaca agcccagacc tctctggact tcctgtttca cttcgggatc tctgcagagg
     2041 atggacccca ccctggcctc taccccctga ctcagccagt tgcaggtctt cagacccagc
     2101 tgctggtaga agtgacaggg ctcgtctcta gacagaaact tggagatggc cagccacagt
     2161 tttcccatgc tgtccttcga agggtctcag agggcactca tctgggccgg gtgtccttgg
     2221 agcccgtggg acccccggag cgaggcctcc ttgctgcctc gctaccgccc acactgctgt
     2281 ctgtctctgt acccttctcc ctggagctgg ttggccagga tgtaggggga cagtgtctgc
     2341 ggaggtctgc tccccagcct tgcagtgtgg ctcccgtgct tctggagctc agtggcccgc
     2401 cagatttctt gactccgggc agcaaggccc ctctcagcct ccgagtcgcc agcttctctg
     2461 gcccccagga tgttgatctt aggtcatccg tgaaccctag cttctccctc acctccaacc
     2521 tctccagggc tcgcctggga ctgaacgagt ctgcctgggg atgcctgtgg ctagaggtcc
     2581 cagattcagc agcccctgac actgtggtga ctgtgactgt gactgtgact gcagtgggtc
     2641 agggagccag ccaggtgccc ccaacccatg ccttcctcca gctcctggtg ctggcccagt
     2701 cctcaaagga ccagctggag gaccccaccc actcagctgc ccctgtgctg cccccaacca
     2761 cccccgccct gcttccttcc actttggtga ctcggggcag agctgggaga gggacaacag
     2821 gcaaaacctg gtgggggaca gttggaggtg tgctgttcct gctaggctgc acttcctggt
     2881 aacacaggga cagggcatcg ggccccattc tcagtctgcc ctatgggtgg gatgctcaca
     2941 tggcttcaga gccctgccct gcctacctgg tgtggggatt ttttttttaa agatctattt
     3001 atttattata tccataatgt tctgcacata tatataaata tctgcatgtc aaaagagggt
     3061 accagatctc attacagatg gttgtgagcc accatgtggt tgctgggaat tgaactcagg
     3121 tcctctggaa gaacaatcag tggtctcaac ctctgagcca tctctccagc ccagggatct
     3181 ttcttctatc acatttgtcc cttatctttc tttagaccag actggcctca cagacctgcc
     3241 tctgcgtgtc ttcctaccgc agggatcaaa ggcatgcact gctgctgcct ggctcctttg
     3301 tctttctaag acgagtagac tggtgtgcac aggtggtaca acttgtagtc cctgtaacag
     3361 gaaggactgc tgctgtgagt tcaaggccag cctgagctat gagaccctag ctcaaaaaca
     3421 tcaatcaaac acacacacac acacacacac acacacacac acacacagga ttgggatcta
     3481 ggatgatggg tttcccttgg ggtgcttttc ctaaccccaa cgggaaccaa accaaaggct
     3541 ttccttttct ctctctctct cttttttttt tttttttttt ttttttttta agagagctgc
     3601 tgtttattcc agaagcagag cagggcaggg gcaccagaaa gtacaatttt cctttaaatt
     3661 ccagggcagc ttttttagct tagttttgct tcaagctgaa ggagagtctc cttgatcacg
     3721 cctcctcccc aaatacactg aagaaagaca gggctttgta gtggcatggg ggagagggag
     3781 ggcaagggat gtcaaggaag tgcggtggac acttttagga gttgcaggag cactctactg
     3841 agttgtctga atttctcagc ctggagccac tggctgctga atgaagatta aatagatgag
     3901 gggggcaggg gcaggggcag gggactctga ctccaacccc actccttaca ccagtgcagg
     3961 gaggggaggg tttacacaag ggtaggcccc tttgctcctg gtgggggagc ctggctgatc
     4021 acctctcctg ttcgatggct gactcctttc tgctgctttg acaactcctg aaagagagag
     4081 aaccagcctg gcacccgcca ctcaccctgt gggtttgtca gccagggctc aacacccctc
     4141 agcttaccca tcgctgccac aagttctctg ccttggcatt ccctcctggc cctgggctgc
     4201 acaggaatca gtttttccag tggatacggg caaggccgaa tcaacctgac tccacaagcc
     4261 ccctccccga agtctagaaa ttaagaacaa taaactcacc ttctgaatca gactgcgcaa
     4321 acaagcattc accttttgaa tcctggt
//
