LOCUS       NM_001107988            3783 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus von Willebrand factor A domain containing 5B1
            (Vwa5b1), mRNA.
ACCESSION   NM_001107988 XM_001070856 XM_233587
VERSION     NM_001107988.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_233587.4, XM_001070856.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132299, SAMD00155312
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3783
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /note="von Willebrand factor A domain containing 5B1"
                     /db_xref="GeneID:313653"
                     /db_xref="RGD:1308559"
     exon            1..109
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            110..271
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..3783
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /codon_start=1
                     /product="von Willebrand factor A domain-containing
                     protein 5B1"
                     /protein_id="NP_001101458.1"
                     /db_xref="GeneID:313653"
                     /db_xref="RGD:1308559"
                     /translation="MPGLLNCFTGAALPLTASDVTSYVSGYALGLTASLTYGNLEAQP
                     FQGLFVYPTDECTTVVGFEAVIADRVVTIQLRDKAKLDRSYLDVQSATVTGNLPEEEI
                     PITPGKVTLDEDLERILFVVNLGTIAPMENVTIFISTSSELPTLPSGAVRVLLPAICA
                     PTVHPFCAHRFGSSRQQPRGKDPHCFGTQSKDSYKRLCLATLLDTKVTNPMEYEFKFQ
                     LEIRGPCLLAGVESPTHEIRADAAPSAHSAKSIIITLAKKHTFDRPVEILLHPSEPHM
                     PHVLVEKGDMTLGEFYQHLKRKADFVRGTKKDNIAERKTEVIRKRLHKDIPHHSVIML
                     NFCPDLESVQPNPRRTHGEFIFLIDRSSSMSKTNIQCIKEAMLVALKSLMPACLFNVI
                     GFGSTFKTVFASSQIYNEENLALACECIQRMRADMGGTNIFSPLKWVLRQPLRQGHPR
                     LLFLITDGSVNNTGKVLELVRNHASSIRCYSFGIGPTVCYRLVKGLASVSKGSAEFLM
                     EGERLQPKMVKSLKKAMAPVLSDVTVEWVFPETTEALISPVSTSSLFPGERLVGYGIV
                     CDASLYISNSRSDKRRKYGMLHAQESSSSVFYHSQDEGLRPGSGNCAKNFNQGQTKDA
                     HPCNGDSLSHHGLDGSRRRRAYSTNQISSHKACSRATTASDPTGTTRRYPLRKAKVQD
                     LAHQSSSESQQWQIDLQPLLTRGHDPSQGPRLHGPGARRPSLLPQGCQPMRFSGPEPQ
                     AWSPVRELGLGSGRKSVLNSRSSEDLATEPPPFPSTLEPETSSDLEPTAELEEQAPYR
                     TATPSPVLGKVLVKGVCDNQHMQWEVSFELEPPALRREDTQNDDMWGETFHHLAARAI
                     IREFEHLAQREDEIELGSNRRYQVNAVHTSKACNVISKYTAFVPVDINKRQYLPTVVK
                     YHNSGALLSFRNLTRQWKGFSTGLRRSQSMLREHSSAAGDSKFQTLALHESLTSTFNK
                     TPSPGHEKYATAEGPPQNLSTSSLSSTKASEAIFGSRLILNKSRLLTRATKNFLSKSL
                     PKAPEVNPGSQSSDYVPLVSLQLASGAFLLNEVFCRTIQIPMEKLKWTSPFNCLRMSL
                     VTRRHDLKTQSPGDCTSLSSPPPPSDDISLKSGAKDSSDQESSELLEHTGKLWATVVA
                     LAWLEHSSASYIIEWELVAAKASSWVELQEVPEGRTLSTIKATARQLFVLLRHWDENL
                     EFNMLCYNPNYM"
     exon            272..415
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            416..671
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            672..817
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            818..949
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            950..1074
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            1075..1251
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            1252..1362
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            1363..1565
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            1566..1680
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            1681..1866
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            1867..2038
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            2039..2229
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            2230..2431
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            2432..2749
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            2750..2887
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            2888..3013
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            3014..3088
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            3089..3158
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            3159..3276
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
     exon            3277..3783
                     /gene="Vwa5b1"
                     /gene_synonym="RGD1308559"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cactttgacg gaaggatttg gctcccagac tgtggtttga gcttgagctc cctaaagaag
       61 agaaagggat ttctaggggt aacaagagga atgggacccc aaaactgaga ctctgagctg
      121 agcagcccca gaatgcctgg cctgttgaac tgcttcacgg gggcagccct gcctctcacc
      181 gcgtctgacg tcacctccta cgtcagcggc tatgccctgg gcctcacggc ctcccttacc
      241 tatggcaacc tggaggctca gcccttccaa ggtctcttcg tgtatccgac ggatgagtgc
      301 accacagtgg ttggtttcga agccgtcatt gctgaccgag ttgtgaccat acagctcaga
      361 gacaaagcca agctggacag aagctacttg gatgtccaat ccgccactgt cacagggaac
      421 cttccagaag aggagattcc catcacaccg ggaaaggtga ccttggatga ggatctggag
      481 cggattctgt tcgtggtcaa cctggggacc attgctccca tggaaaatgt caccatcttc
      541 atcagtacct cctcggaact ccccacgcta cccagcgggg ccgtgagggt ccttctgccg
      601 gccatctgtg ccccgaccgt gcacccattc tgcgcccaca ggtttggctc ctccagacaa
      661 cagccacgag gcaaagaccc acactgcttc ggcacccagt ccaaggactc ctataagagg
      721 ctgtgtctgg ccactctcct ggacacaaag gtgaccaacc caatggaata tgaattcaaa
      781 tttcagctgg aaatccgcgg gccatgtctg cttgcagggg tggagagtcc cactcatgaa
      841 atccgagcag atgcagcccc atcggcccac tcagccaaaa gcatcatcat caccttggcc
      901 aaaaaacata cctttgaccg gccggtggag atccttctcc accccagtga gccccacatg
      961 ccgcatgtcc tggtggagaa aggggacatg accctggggg aattctacca gcacttgaag
     1021 cgaaaagcag atttcgttag aggaacaaag aaggacaaca tcgctgagcg gaagacagaa
     1081 gtcatccgga agcgtctcca caaagacatt ccccaccact cagtcatcat gctcaacttc
     1141 tgtcctgacc tcgagtccgt gcagcccaac cccaggagga cccatgggga atttatcttc
     1201 ctcatcgaca ggagcagcag catgagcaag accaacatcc agtgcatcaa ggaggccatg
     1261 ttggtggccc ttaagagcct catgccagca tgcctcttca atgtcattgg tttcggatcc
     1321 acatttaaga cagtctttgc ttccagtcag atctacaatg aggagaactt ggccctggca
     1381 tgtgaatgca tccagagaat gcgagctgac atgggaggca ccaacatatt ctcccctctg
     1441 aagtgggtcc tccggcagcc actgcgccag ggtcacccac ggctcctctt cctgatcacc
     1501 gatgggtctg tgaacaacac cgggaaggtt ctggagctgg tgcggaatca tgcctcttct
     1561 atcaggtgct atagctttgg aattggaccc acggtctgct acagactggt aaaagggctg
     1621 gcgtctgtat ccaagggcag tgcagagttc ctgatggagg gggagcggct gcaaccaaag
     1681 atggtcaaat ccttgaagaa ggccatggcc ccagtgctga gcgacgtgac cgtggagtgg
     1741 gtttttcctg agaccacgga ggccctgatc tctcctgtca gcaccagctc ccttttccct
     1801 ggggaacggc tggtgggata tggcattgtg tgcgatgcct ccttgtacat ctccaattcc
     1861 agatctgaca aaagacgaaa gtatggcatg ctgcatgctc aggagtccag cagctctgtc
     1921 ttctaccact ctcaggacga gggactcagg ccaggcagcg gaaactgtgc caagaacttc
     1981 aaccaggggc agaccaaaga cgcccatcca tgcaatggag actccctctc ccatcacggt
     2041 ctggatggct cccggcgtcg gagggcatac agcactaatc agatctccag tcacaaggct
     2101 tgctcaaggg ccaccacagc cagcgacccc actgggacta ccaggagata cccacttcga
     2161 aaagccaagg tgcaagacct ggcccatcag agcagctcag agagccagca gtggcagatt
     2221 gatctgcagc cgctactcac cagaggccat gacccaagcc agggccccag acttcatggc
     2281 cctggagccc gcaggccttc ccttcttcct caaggctgcc agcccatgcg gttctctggc
     2341 ccggagcccc aggcctggag ccccgtgaga gagctgggtc ttggctccgg ccggaagtct
     2401 gtccttaaca gccgaagctc tgaggaccta gccacagagc cacccccttt tccctcgacc
     2461 ttggaaccag agacatcctc agacttggag cccacggctg aattagagga gcaagctccc
     2521 tacaggaccg ccacgccaag ccctgtgctg ggcaaagttt tggtcaaagg agtgtgtgac
     2581 aaccagcata tgcagtggga agtgagcttt gagctagaac ctccagccct gcggagggag
     2641 gacacacaga acgatgacat gtggggcgag actttccacc acctggcggc ccgcgccatc
     2701 atccgcgaat tcgagcatct ggcccagcgc gaggatgaga ttgagctggg gtccaatcgc
     2761 agataccagg tgaacgccgt gcacaccagc aaggcctgca acgtgatcag caagtacacg
     2821 gccttcgtgc cggtggacat aaacaagagg cagtacctgc ccacggtggt caagtaccac
     2881 aattctggtg ctctactcag cttccggaac ctgacccgac agtggaaagg cttctctact
     2941 ggccttagga ggtcccagag tatgctcaga gaacactcct cagctgcagg agacagcaaa
     3001 ttccagaccc tagccttaca tgaaagcctt acttcaacct tcaataagac cccatcccct
     3061 gggcatgaga agtatgctac agcagaaggt ccccctcaaa acctgtccac cagctctctg
     3121 tcctccacaa aggcctccga ggccatcttt ggatctaggt tgattctcaa caaatccagg
     3181 ctgctgaccc gagctaccaa aaactttctc agcaaatcat tgcccaaggc tccagaggta
     3241 aacccaggca gccagagctc tgactacgta ccactggtgt ctctgcagct ggcctcggga
     3301 gcctttttgc tcaatgaagt cttctgcagg accatccaaa tccccatgga gaaactcaag
     3361 tggacctcac ccttcaactg cctccgaatg tccctcgtca cccgccggca tgatttgaag
     3421 acccagagtc caggggactg caccagtctc tcctctccac ctccaccctc tgacgacatc
     3481 tccctaaagt ctggcgccaa agacagctca gaccaggagt ccagtgagct gctggagcac
     3541 acggggaagc tgtgggccac tgtggtggcg ctggcgtggc tggaacacag ctcagctagt
     3601 tacatcattg agtgggagct ggtggctgcc aaggcgagct cgtgggtaga gctgcaggag
     3661 gtgcccgagg gccgcacact gagcaccatc aaggccactg ctcgccagct gttcgtgctc
     3721 ctgcgacact gggatgagaa cctggagttc aatatgctct gttacaaccc aaattatatg
     3781 taa
//
