LOCUS       XM_342561               1393 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus V-set and transmembrane domain
            containing 2 like (Vstm2l), mRNA.
ACCESSION   XM_342561
VERSION     XM_342561.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_342561.10.
            
            On Jan 21, 2021 this sequence version replaced XM_342561.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1393
                     /gene="Vstm2l"
                     /note="V-set and transmembrane domain containing 2 like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 44 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:362255"
                     /db_xref="RGD:1305725"
     CDS             180..788
                     /gene="Vstm2l"
                     /codon_start=1
                     /product="V-set and transmembrane domain-containing
                     protein 2-like protein"
                     /protein_id="XP_342562.5"
                     /db_xref="GeneID:362255"
                     /db_xref="RGD:1305725"
                     /translation="MGAPLAAALGALHYLALFLQLGGATRPAGHAPWDNHVSGHALFT
                     ETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYLRSHRDWTDKQTWASNQLKASQ
                     QEDSGKDATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY
                     LRVQPGENSVLQLPDAPPAAPAPPPKPGRELRKRSLPEACSL"
ORIGIN      
        1 agtcccgcag tcggaggcgg cgggctgggc gtgcgctcgc tgcctgcagc cggggccggg
       61 ccggggccag cgggagaggg cggcggcggc ggcgccgggc agggcacggc gggcgcgggc
      121 tctgcgggct gcggagcccc gatgtgaggc ggcggcgccc cccggccgga gcgcgcagca
      181 tgggggcccc gctggccgcg gcgctgggcg ccctccacta cctggcactt ttcctgcaac
      241 tcggcggcgc cacgcggccc gcaggccatg cgccctggga caaccacgtc tccggacacg
      301 cactcttcac agagactccc catgacatga cagctcggac aggcgaggat gtggagatgg
      361 cttgctcctt ccgaggcagc ggctccccat cctactcact ggagatccag tggtggtacc
      421 tgcgaagcca ccgggactgg accgacaagc agacatgggc ctccaaccag ctaaaagctt
      481 cccagcagga ggactcgggg aaggatgcca ccaaaataag tgtggtcaag gtggtgggca
      541 gcaacatctc ccacaagctt cggctgtcgc gggtgaagcc cacggacgaa ggcacctacg
      601 agtgccgcgt gatcgacttc agcgacggca aggcccggca ccacaaggtc aaagcctacc
      661 tgcgagtgca gcccggggag aactcggtgc tgcagctgcc tgatgcgccc ccagccgcgc
      721 ccgcgccgcc gcccaagccc ggccgggagc tgcgcaagcg ctctctgccc gaggcctgca
      781 gcctgtagcc cacccgtccc gcatgcagtc ctcctggccc tgtggcgacg gcggcagagg
      841 agtcccgcgt gtgctttgct tgcttatccc cctcccggct ccgcctcttg caccccgtcc
      901 tcgcggccag ccccctggtg aggagccggg ccgggggggg gggggggggc atgctcctgt
      961 ttctcctcat tctacctgga acccgctccg ggccccccag ggaggcggag ccccaccagt
     1021 cccacgcggg aggctgcctc gccaggcaga gttagcacca gcaggctcgc tcagggcccc
     1081 cccgaggctc tccccgagcc cccctctgcc ggcaacaccc ccacgcccag ccccttctcg
     1141 ggcctgtgaa gtccatccaa gggaccccct ccacttatcc catccccatt cccgatcagg
     1201 ggacacccac cctggtggtt tgtaaatatt tctactgggc ccaccccgcc ccggaactgg
     1261 ctcaaacctc tggccaccct cggtgatgga ggggaggtgg gaggcccagg gctttgccta
     1321 ggggtgagcg ggccctgtgt atatgaccca acctgtgagt accagccaac tccaataaag
     1381 cggtttaaac caa
//
