LOCUS       NM_001105972            1812 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus V-set and immunoglobulin domain containing 8
            (Vsig8), mRNA.
ACCESSION   NM_001105972 XM_001055980 XM_222908
VERSION     NM_001105972.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Rice,R.H., Phillips,M.A. and Sundberg,J.P.
  TITLE     Localization of hair shaft protein VSIG8 in the hair follicle, nail
            unit, and oral cavity
  JOURNAL   J Invest Dermatol 131 (9), 1936-1938 (2011)
   PUBMED   21614015
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473985.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_222908.4, XM_001055980.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132284, SAMD00132285
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..1812
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /note="V-set and immunoglobulin domain containing 8"
                     /db_xref="GeneID:289236"
                     /db_xref="RGD:1562464"
     exon            1..197
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..1402
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /note="V-set and immunoglobulin domain-containing protein
                     8"
                     /codon_start=1
                     /product="V-set and immunoglobulin domain-containing
                     protein 8 precursor"
                     /protein_id="NP_001099442.1"
                     /db_xref="GeneID:289236"
                     /db_xref="RGD:1562464"
                     /translation="MGVRGAFHLLLVCLSPALLSAVRINGDGQEVLFLAEGDNVRLGC
                     PYILDPEDYGPNGLDIEWMQVNSEPSHRENVFLTYQDKRISHGNLPHLQQRVRFAASD
                     PSQYDASINLMNLQVSDTATYECRVKKTTMATRKVVVTVQARPAVPMCWTEGHMSKGN
                     DVVLKCFANGGSQPLSYKWAKISGHSHPYRAGSYHSQHSFHSELSYQESFHSSINQGL
                     SNGDLVLKGVNADDDGLYQCTVANHVGYSVCVVEVKVSDSQRVGMIVGAVLGSLLMLA
                     CLAVGIWGLICCCCGGAGAGGARGAFGYGVGGGVGGGACGDLASEIRVDAEAPGCKAS
                     GRGSRVTHLLGYPTQNVSRSLRRKYAPPPCGGPEDVALVPRTTSAACEAGPSPVYIKV
                     KSAEPADCADCAQVEQRSCKDGLLV"
     exon            198..373
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
     exon            374..575
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
     exon            576..797
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
     exon            798..917
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
     exon            918..1116
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
     exon            1117..1812
                     /gene="Vsig8"
                     /gene_synonym="RGD1562464"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acactcattg caccttcctg ccaccccggg cagtgtctgg gccctccgct ccccctccct
       61 ccacctgccc cttccaccca ctaccaccac caccaccacc ggcccactgg agcccagctc
      121 aggcccagaa aagaccaagc ctagagacat gggagttcga ggagcgttcc atctactgct
      181 cgtgtgcctg agcccagcat tgttgtctgc tgtaaggatc aatggggatg gccaggaggt
      241 cctgttcctg gcagaaggtg acaatgtgag gctaggctgt ccctacatcc tggatcctga
      301 agattatggt cccaatggtc tggatattga gtggatgcaa gttaactcag aaccctcgca
      361 tagggagaat gtgtttctta cttatcaaga caagcggatc agtcacggca acctccctca
      421 tctgcagcag agggtccgct tcgcagcctc agaccccagc cagtacgatg cctccatcaa
      481 cctcatgaac ctgcaggtgt ctgacacagc aacctatgag tgtcgggtga agaagaccac
      541 catggccacc aggaaggtcg tggtcactgt ccaagcacgt cctgccgtac ccatgtgttg
      601 gactgaaggc cacatgtcaa agggcaacga tgtggtgctg aagtgctttg ccaacggagg
      661 ctctcagccc ctctcctaca agtgggccaa gatcagtggg cacagccacc cctaccgagc
      721 tgggtcctac cactcacagc acagcttcca ctctgagctt tcttaccaag agtcgttcca
      781 cagctccatc aaccaaggcc tgagcaacgg agacctggtg ttgaagggcg tcaacgcgga
      841 cgacgatggg ctgtatcagt gcacagtggc caaccatgtg ggctacagcg tctgcgtggt
      901 agaggtgaaa gtctcagact cccagcgtgt aggcatgatc gtcggcgcag tgctgggctc
      961 tttgctcatg ctagcctgcc tggcagtagg catctggggg ctcatctgct gctgctgcgg
     1021 aggcgccggg gccggtggtg cccgaggtgc cttcggctac ggggtcggcg gcggggtcgg
     1081 cggaggggcc tgcggcgact tggctagtga gatcagagtg gacgccgagg cgcccgggtg
     1141 caaggccagc gggcgcggca gccgcgtcac ccacctcctg gggtacccga cgcagaacgt
     1201 cagccgctcc ctgcgccgca agtacgcgcc tccgccctgc ggcggccccg aggacgtggc
     1261 cctagtgccc cgcaccacct ctgccgcctg cgaagcgggt ccctccccgg tctacatcaa
     1321 ggtcaagagc gcggagccgg ccgactgcgc cgactgtgcc caggtcgagc agcgctcgtg
     1381 caaggacggc ctcttagtgt gagcgcgcag caccgggctg cgccccggct gggaggcggt
     1441 tcgggggctc tccgcccgca gctggggaca ggttcgggcc agcagacttg gctctcatcg
     1501 gccacctagc ggtggtaagg gggtttccct ctgagaagcc aagaggggca gagcctcctc
     1561 ccctcgagtg ggaggagatt gggggggata agaagacagt tggagccttc cctcaaccct
     1621 gggctccagg gatagtttgg gagaggagcg ctgtctgtat cccagaaacg cagaggtagg
     1681 agccagatgt tcccagccaa ggcagagggc cccccagcct tgggtaggtg gatgtcaggg
     1741 ctgaattgtt ctgtgtgtga gatctgagct ctgaggcaac agtgttagca caataaagaa
     1801 gcttaaagac tg
//
