LOCUS       XM_039082297            2379 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus V-set and immunoglobulin domain
            containing 10 like 2 (Vsig10l2), mRNA.
ACCESSION   XM_039082297
VERSION     XM_039082297.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086026) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2379
                     /gene="Vsig10l2"
                     /note="V-set and immunoglobulin domain containing 10 like
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:108351843"
                     /db_xref="RGD:11474175"
     CDS             1..2379
                     /gene="Vsig10l2"
                     /codon_start=1
                     /product="V-set and immunoglobulin domain-containing
                     protein 10-like 2"
                     /protein_id="XP_038938225.1"
                     /db_xref="GeneID:108351843"
                     /db_xref="RGD:11474175"
                     /translation="MVCLSAHHRPSCRLLILFCLLHPGASDQPYPTLNTPGEEASSIQ
                     GVRGKSVDLECRTGAAPVAVLWSFAPLGSLVLRPVAVTNGVSSKVESWALALGVVSLR
                     NSTLVIEELRESACGHFLCQTLLMSGGQVHTTYSYLTLTVLVPVSKPRVQLNDLSPVE
                     GVSVVATCAVREGTEPLAFSWHHHTPQGPGEVLVGLSQPRLQLDPVNRTHLGWYMCSV
                     GNAVNELKSDGAFLDVVYGPDKPVITVEPLGLSEDGIWASEKEEVTLSCLAASNPPSH
                     YVWFRDNSQIHTGPTYIIASASRTHTGLYTCLAHNRHLDTHTQTTVQLTIYYPPEGQP
                     SCAVLPTLEGVTLLCAWPGGFPNAQLHWEGPQGIGPSASSNVTWSYTVTGLPNGSVFT
                     CMGQHPTLAIPIFCRVTLWEPSGSPTCWTTATVGDQFIMLSCEWPGGEPPAMLSWLDR
                     QQQSLGDLSPSQAVYLLQAQSELAGREFTCQGSHPLKAPGSHCQLRLEVPQLTVTEPR
                     VSVLEGEEAWLGCALQRGTPPAQLLWLGPQQQQLEGSTFGFTLHPEGTHLRLQVRDAD
                     PAHHRGTYQCVARNALGNSSQSVLLEILRYPAPPNVTISRLTYRRQRREVQLQWAIYG
                     PGNLTGFLVQQRASVPSSEDGAWEVAASDIEPESRDRHLGGLDPAVLYAFRILAMNHH
                     TAGHPSEVKTPVDPAFSAYPAVLGAAGTGAVVALATSLLVFQYAARHPHTFPCLRRLL
                     IPMEHELQQRASRESTEAPAGTETASITSSPDPIQESIDAPVNVTITVTATP"
ORIGIN      
        1 atggtgtgtc tgagcgccca tcacagaccc agctgccggc tgctgatact cttctgccta
       61 ctgcatccag gggcctcaga ccaaccctac ccaaccttga acacccctgg ggaggaggct
      121 tcgtctatcc aaggagtgcg gggcaaatct gtggatctag agtgcagaac tggggctgcc
      181 ccggtggcag tcctctggag cttcgctcca ctgggttccc tggttctccg gcctgtggca
      241 gtcaccaatg gagtctcttc gaaggtggag tcctgggcat tagctctggg ggtcgtgagt
      301 ctgaggaaca gcaccctggt gatagaggag ctccgagaga gtgcctgtgg ccacttcctg
      361 tgccagacct tgctcatgtc aggtggccag gtccacacca cctactcgta cctcacacta
      421 accgtgctgg tgcctgtgtc taagcctcga gtgcaactga atgacctgtc tccagtggaa
      481 ggcgtctccg tggtggccac ttgtgctgtg agggagggca cagagccatt ggccttctcc
      541 tggcaccatc atacacccca aggccctgga gaggtcctgg tgggtctttc ccaaccaagg
      601 ctccagctag atcctgtcaa ccggacccac ctaggctggt acatgtgcag tgtgggcaat
      661 gcagtcaacg agctcaagag tgatggagcc ttcctagatg tcgtctatgg tccagacaag
      721 cctgtgatca ctgtggaacc gctgggactc tctgaagatg ggatctgggc cagcgagaag
      781 gaggaggtga cgctgagctg cctggctgca tccaatccac ctagtcacta cgtgtggttc
      841 cgtgacaact ctcagatcca caccgggccc acctacatca tcgccagtgc tagccgcacc
      901 cacacgggcc tgtacacctg cctggcacac aacagacacc tagataccca cacccagacc
      961 acagtccagc tcaccatcta ctatccccct gaagggcagc cctcctgcgc tgtgctcccc
     1021 accctcgagg gtgtgaccct gctgtgtgcc tggcctgggg gttttccaaa tgctcaactt
     1081 cactgggaag ggccccaggg gattggccca agtgcctcca gcaacgtcac ctggagttat
     1141 acagtcaccg gacttccaaa tggtagcgtc ttcacctgta tgggacagca cccaaccttg
     1201 gctataccta tcttctgtag ggtcactctc tgggaacctt ctgggagtcc tacttgttgg
     1261 accacagcca cagtaggtga ccagtttatc atgctgagct gtgagtggcc tggaggtgaa
     1321 cctcccgcaa tgctgagctg gctggacaga cagcagcagt cactgggtga cctgagccct
     1381 tcccaggctg tctacctcct gcaggctcag agcgaactgg caggcagaga gttcacctgc
     1441 cagggttctc acccactcaa ggcgcctggc tcccactgcc agctaaggct ggaagtccca
     1501 cagctgacag tgactgaacc ccgagtgtca gtgctggagg gagaagaggc ctggctgggc
     1561 tgtgctctcc agcggggcac accacctgct cagctcctct ggctgggacc ccagcaacag
     1621 cagctggaag gaagtacttt tggattcacg ctacaccctg agggtaccca cctgcgcctt
     1681 caagtccgag atgctgaccc agcacaccac aggggcactt accagtgtgt ggcccgcaat
     1741 gccttgggca acagtagcca gagtgtgctg ctggagatcc tgaggtatcc agctcctccc
     1801 aacgtcacca tcagccgact gacctacagg cgacagcgga gagaggtgca gctgcagtgg
     1861 gccatctacg gccctggcaa cctcacaggc tttctggtgc agcagagggc cagtgtcccc
     1921 agctcagaag atggtgcttg ggaggtagca gctagtgaca ttgagccgga gagcagggac
     1981 cggcatctgg gagggttgga cccagcggtc ctttatgcct tccgtatctt ggctatgaat
     2041 caccacacgg caggacatcc ttcagaggtg aagacaccag tggaccctgc cttcagtgcc
     2101 tacccagctg tactgggtgc tgcaggcaca ggagcggtgg tggcattggc gacctctttg
     2161 ttggtgttcc agtatgctgc ccggcaccca cacactttcc cctgcctgag gcgactgctt
     2221 attcctatgg aacacgagct gcaacagagg gcctccaggg aaagcactga ggccccagca
     2281 ggcacggaaa cagcatctat cacctcaagt ccagacccta tacaagaatc catcgatgct
     2341 ccagtaaacg tcaccatcac agtgactgca acaccgtaa
//
