LOCUS       NM_001398941            2265 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vertebrae development associated (Vrtn), mRNA.
ACCESSION   NM_001398941 XM_003750199
VERSION     NM_001398941.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 28, 2021 this sequence version replaced XM_003750199.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2265              JAXUCZ010000006.1  110025741-110028005
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..2265
                     /gene="Vrtn"
                     /note="vertebrae development associated"
                     /db_xref="GeneID:679509"
                     /db_xref="RGD:1587174"
     CDS             1..2265
                     /gene="Vrtn"
                     /codon_start=1
                     /product="vertnin"
                     /protein_id="NP_001385870.1"
                     /db_xref="GeneID:679509"
                     /db_xref="RGD:1587174"
                     /translation="MTSRDQLVQQVLRNLQEAVESEGLEGLISAALEAKQVLASFSLP
                     ICQKGGPGAQVLEVDSVALSLYPEDAPRNMLPLVCKGEGSLLFEAASMLLWGHTGLSL
                     ELRARTVVEMLLHRHYYLQGMIDSKVMLQAVRYSLCSEESPEMTNLSFATLEAIFDAD
                     VRATCFPTSFSNVWHLYALASILERNIYSIYPMRNVRIRPYFNRVIMPRRSTHVTSML
                     HIMWAGQPLTSHLFRHQYFAPVVGLEEVEADGTASLDPAPPNLGPLLPPAKTLELLNR
                     EPGLSYSHLCDRTSITKSTFYRWRRQTQEHRQKVATRFSAKHFLQDSYHRGGFVPLQQ
                     FLQRFPEISRSTYYAWKHELLGSGANSALVPATPSREAVAVPEVERPPGKMAAEELGC
                     SPLTAAISSPTSLILMQRAKSYLEHCISLNKLVPYRCFKCRFPGISRSTYYNWRRKAL
                     RRTPSFKLSPGLETTESLQPTDVGEESLHSLKSEVGEEGAGKAVGEAPLTSRGFTSPR
                     MPLSRWQRRIRRAARKQVQSGRLPFCRFRLRYPSLLPSTFWVWKSLSRGRPRMQAPSL
                     SQRKQKLEERQKPEERQKPEEWQKPEERQKPEEWQKPEERQKPEERQKPVEWQDVEAV
                     RKVTPVVVPSVETLPVAASPEDAPEIAPGGPSREGIVQEAAVVQGQPHSGSLPSQTMV
                     MAPGGSDGQVLVMDVLSATRFKAQAKLFLQKRFQSKTFPSYKEFQALFPLTARSTYYM
                     WKRALYEGLTLVDG"
     exon            1..2265
                     /gene="Vrtn"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacttctc gggatcagct ggtgcagcag gtactgcgca atctgcagga ggcagtggag
       61 tccgagggct tggagggtct catcagtgct gccctggagg ccaagcaggt cctagcttcc
      121 ttcagcctcc ccatctgcca gaagggtggc cctggcgccc aggtgctgga ggtggactct
      181 gtggccttga gcctgtaccc agaggatgct cctcggaaca tgctgccctt ggtgtgcaag
      241 ggtgagggta gcctgttgtt tgaagcggcc agcatgttgc tgtgggggca cacgggtctc
      301 agcctggaac tgcgggctcg cactgtagtg gagatgctgc tacaccggca ttattacctc
      361 caaggcatga tcgactccaa agtgatgctg caggccgtgc gctactcctt gtgctctgag
      421 gagtcccccg agatgaccaa cctgtctttt gccacgctgg aggccatctt cgacgctgac
      481 gtcagggcta cgtgcttccc tactagcttc tccaatgtgt ggcacttgta cgcccttgct
      541 tccatcctcg agcgcaatat ctactccatc taccccatgc gcaatgtcag gatccgaccc
      601 tattttaacc gtgttatcat gcctcgccgc tccacccacg tgacctccat gctgcacatc
      661 atgtgggctg gtcagcccct cactagccac ctcttccgtc atcagtattt tgcccctgtg
      721 gttgggctgg aggaggtgga ggctgatggt actgctagcc tggaccctgc tcctccaaac
      781 ctgggtcctc tgctaccacc agccaaaacc ctggagctgc tcaaccgtga acccggcctc
      841 agctactccc acctctgtga ccgcaccagc attaccaaga gcacctttta ccgctggcgg
      901 cggcagaccc aagagcaccg gcagaaggtg gccacccgct tctctgccaa gcacttcctg
      961 caggacagct accaccgtgg gggctttgtg ccgttgcagc agttcctgca gaggttccct
     1021 gagatatccc gctctaccta ctatgcctgg aagcatgagc tgctgggctc tggtgctaac
     1081 tcagccctgg tcccagccac tccatcccgg gaggcagtgg ccgtgccaga ggtggagagg
     1141 ccaccaggga agatggctgc cgaggagctg gggtgttccc cactgacagc agcaatctca
     1201 agccctacta gcttgatctt aatgcagcgt gccaagtcat acctagagca ttgcatctcc
     1261 ctgaacaaac tggtacccta tcgctgcttc aaatgccggt tccctggcat ctcgaggtcc
     1321 acctactaca actggaggcg gaaagccctc aggaggaccc ccagtttcaa gctgtcccca
     1381 ggtcttgaaa ctactgagtc tctccagcca acagatgttg gggaagagag cctacactct
     1441 ttgaagagtg aggtgggaga ggagggggcg gggaaagcag taggtgaagc tcctctgact
     1501 tcccgggggt tcacatcccc aaggatgccc ttatctcgct ggcagagacg aatacgcagg
     1561 gctgcccgca agcaggtgca aagtgggcgc ctacccttct gtcgcttccg cctccgctac
     1621 cctagcctgt taccttctac cttttgggta tggaaaagtc tttcccgcgg aaggccccgg
     1681 atgcaggctc cttctttgag ccaaaggaag caaaagctgg aggaaaggca gaagcccgag
     1741 gaaaggcaga aacccgagga atggcagaag cctgaggaac gccagaagcc cgaggaatgg
     1801 cagaagcccg aggaacgcca gaagcctgag gaacgccaga agcctgttga atggcaggat
     1861 gtggaagctg ttaggaaagt aacgcctgtg gtagttcctt cagtggaaac actaccagtg
     1921 gctgcttctc cagaagacgc cccagaaatt gccccaggag ggccttctag agaggggatc
     1981 gttcaagagg cagctgtggt gcagggccag ccccatagtg gatcgttgcc aagccagact
     2041 atggtgatgg caccaggtgg cagtgatggg caggtgctgg tgatggacgt gcttagcgcc
     2101 acgagattca aggcccaagc caagctgttt ctgcagaagc gcttccagtc taagactttc
     2161 ccctcctaca aggaattcca agctctcttc cccctcactg cccgctccac ctactacatg
     2221 tggaagcggg cgctctatga aggtctcacg ctggttgatg gctga
//
