LOCUS       NM_001024867            1743 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus VPS37A subunit of ESCRT-I (Vps37a), mRNA.
ACCESSION   NM_001024867 XM_214353
VERSION     NM_001024867.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Stefani F, Zhang L, Taylor S, Donovan J, Rollinson S, Doyotte A,
            Brownhill K, Bennion J, Pickering-Brown S and Woodman P.
  TITLE     UBAP1 is a component of an endosome-specific ESCRT-I complex that
            is essential for MVB sorting
  JOURNAL   Curr Biol 21 (14), 1245-1250 (2011)
   PUBMED   21757351
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Tsunematsu T, Yamauchi E, Shibata H, Maki M, Ohta T and Konishi H.
  TITLE     Distinct functions of human MVB12A and MVB12B in the ESCRT-I
            dependent on their posttranslational modifications
  JOURNAL   Biochem Biophys Res Commun 399 (2), 232-237 (2010)
   PUBMED   20654576
  REMARK    Erratum:[Biochem Biophys Res Commun. 2011 Mar 4;406(1):158-9]
REFERENCE   3  (bases 1 to 1743)
  AUTHORS   Morita E, Sandrin V, Alam SL, Eckert DM, Gygi SP and Sundquist WI.
  TITLE     Identification of human MVB12 proteins as ESCRT-I subunits that
            function in HIV budding
  JOURNAL   Cell Host Microbe 2 (1), 41-53 (2007)
   PUBMED   18005716
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098069.1.
            
            On Jun 17, 2005 this sequence version replaced XM_214353.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098069.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132262,
                                           SAMD00132263 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.1"
     gene            1..1743
                     /gene="Vps37a"
                     /note="VPS37A subunit of ESCRT-I"
                     /db_xref="GeneID:290775"
                     /db_xref="RGD:1560016"
     exon            1..365
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     CDS             241..1437
                     /gene="Vps37a"
                     /note="vacuolar protein sorting 37A; vacuolar protein
                     sorting 37 homolog A; VPS37A, ESCRT-I subunit"
                     /codon_start=1
                     /product="vacuolar protein sorting-associated protein 37A"
                     /protein_id="NP_001020038.1"
                     /db_xref="GeneID:290775"
                     /db_xref="RGD:1560016"
                     /translation="MSWLFPLTKSASSSAAGSPAGLTSLQQQKQRLIESLRNSHSSIA
                     EIQKDVEYRLPFTVNNLTININILLPPQFPQEKPVISVYPPIRHHLMDSQGLYVTSPL
                     VSNFTMHSDLGKIIQSLLDEFWKNPPVLAPTSTTFPYLYSNPGGMPPYPSQGFPFLPS
                     YPPQEAASRSITSLSVADTVSSSTTSYTAAKPVAPSFGILSSLPLPVPTTESSASINQ
                     NGFGYKMPDIPDAFPELSELSVSQLTDMNEQEEVLLEQFLMLPQLKQIITDKEDLVKS
                     IEELARKNLLLEHSLETKRQAVLDKYELLIQMKSTFEKKMQRQHELSESCSASALQAR
                     LKVAAHEAEEESDNIAEDFLEGKTEIDDFLNSFKEKRTICHCRRAKEEKLHQVIAMHS
                     QFHAPL"
     exon            366..440
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            441..555
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            556..656
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            657..885
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            886..956
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            957..1084
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1143
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1212
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            1213..1356
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            1357..1437
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
     exon            1438..1717
                     /gene="Vps37a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggtggtgt tggccgagag cgcaccgggt cctgtccagc aggcgagtcg cccttttcca
       61 gccgtccgca gagataacta atccggctgg agcctgggac tcgcgagtac ggcgtgtcgg
      121 agaaggcgcg gcccctggcg cctggtcccg gccgtgctcg gtcgctgagg aaccactggg
      181 ctaagcgagg aagagcaggc cggaaccttc tagggcctcg ggcccgggga cccgaggagg
      241 atgagctggc tctttcccct gaccaagagc gcgtcatcct ccgcggccgg gtcccctgcc
      301 ggcctcacca gtcttcagca gcagaagcag cggctgatcg agtcactccg gaactcccat
      361 tccagtatag ctgaaataca aaaggatgtg gaatacagat tgccattcac agtaaacaac
      421 ctgacaatta acattaacat attacttcct ccacagtttc ctcaggaaaa accagtgatt
      481 agtgtttatc caccaataag acatcactta atggatagtc aaggattata tgttacctct
      541 ccattagtaa gcaattttac aatgcactca gatcttggaa aaattattca aagtcttttg
      601 gatgagttct ggaagaatcc tccagtttta gctcctactt caacaacatt tccatacctg
      661 tatagtaatc caggtgggat gcctccttac ccttctcagg ggtttccatt tcttccttcc
      721 taccctccac aagaagctgc tagcaggagc atcacttctt tgtctgtagc tgacactgtt
      781 tcttcttcaa ccacaagtta cactgcagcc aagcctgtgg cgccttcatt tggcatcctt
      841 tcaagtctgc cattaccagt tcccacaaca gaatcttcag catcgattaa ccaaaatggt
      901 tttggttata agatgccgga tattcctgat gcatttccag aactttcaga actaagtgtg
      961 tcacagctca cagacatgaa tgaacaggag gaggtattac tagaacagtt cctgatgttg
     1021 cctcaactaa agcaaattat taccgacaag gaagacctag taaaaagtat cgaggaatta
     1081 gcaagaaaaa atctcctttt ggagcatagc ctggaaacca aaaggcaggc cgtcttagat
     1141 aagtatgaat tacttataca aatgaaatct acctttgaaa agaagatgca aaggcagcat
     1201 gaactcagcg agagttgtag tgcaagtgcc ctacaggcaa gattgaaagt agccgcacat
     1261 gaggctgagg aggagtctga taatattgcc gaagatttcc tggagggaaa aactgaaata
     1321 gatgattttc tcaatagctt caaggaaaag agaacaattt gccactgtag aagagctaaa
     1381 gaagagaagc ttcaccaggt gatagccatg cacagccagt tccatgctcc tctctagatt
     1441 ttcctgaaaa catgaactat caagaaagaa atgtgacaca aacctaagca cattattttc
     1501 tatttatgac ttaggaattg gcctttcatg accatggctg acatccagat gcctatagag
     1561 tatatatgca cctgagactg attttgtata gattagaatg attgctatat ttgttttgag
     1621 aaaagtttct gcactatttg cactaaagat gtttattgtt gacaaatcct gtatttaagt
     1681 tcctctgcta ttcctgatta aacatatatg catgtaaaaa aaaaaaaaaa aaaaaaaaaa
     1741 aaa
//
