LOCUS       NM_001099465            2601 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 9 (Vom2r9), mRNA.
ACCESSION   NM_001099465 XM_001064753
VERSION     NM_001099465.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 15, 2007 this sequence version replaced XM_001064753.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-224               JAXUCZ010000001.1  58994588-58994811
            225-531             JAXUCZ010000001.1  59000862-59001168
            532-1338            JAXUCZ010000001.1  59001524-59002330
            1339-1554           JAXUCZ010000001.1  59003372-59003587
            1555-1678           JAXUCZ010000001.1  59005478-59005601
            1679-2601           JAXUCZ010000001.1  59007581-59008503
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..2601
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /note="vomeronasal 2 receptor, 9"
                     /db_xref="GeneID:685666"
                     /db_xref="RGD:1591347"
     CDS             1..2601
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 9"
                     /protein_id="NP_001092935.1"
                     /db_xref="GeneID:685666"
                     /db_xref="RGD:1591347"
                     /translation="MYVNRMFCVFIPWSMQIPTFECAFQYSECYFRFKENFHCEGNVV
                     IGAFFPLHTFYTANKTAYGNVMNYYKDFYLKYKFNNYQFVLALVFAIEEINKNPHLLS
                     NISLGFHVYNVPYTEKNTLMSTLIWLTGQRNFMPNYNCRMNRMSAAALTGTSWATSAQ
                     IGTLLQLYKFPQVREIILTFGPSDPILSDRGQFSSLYQMAPNDTTLSLAMVSLMLHFN
                     WSWVGLLLIDDHKGTHILSHLREEMDRSKICLALVEMIPVTWTSFSYNFWKNLKKIQE
                     SLANVFIIYGDIDSLQGLMDNLGQQLITWKVWIMNSQWDSTKQADYFLLDSFHGSLIF
                     SHHHEESFEFSNFIRKVNPYKYPEDPYLPKLWYALFNCSFSKFDCQLLENCQPNASLE
                     LFPTTIIDMSMSEESYNIYTSVYAVAHTLQEMSLQQCQMQSHLKGEKMVFFPWQLHHF
                     LRKIHEGDHMSLEWKWRFIEEYDILNFWNFPKGLGLKVKVGTFSLDAPQGEQLSLSEH
                     MIQWPTKFTQIPQSACYTSCWPGFRKATQKGRAVCCYDCIPCLDNEISNETDVDQCVK
                     CPETHFPNTEKNNCLQKSMSFLEYNDNLGMVLITIALCFSALTLAVLGVFVKYRDTPI
                     VKANNRTLSYILLMTLVVCFLCSLLFIGHPNTATCLMQQTTFGIVFTVALSTVLAKVI
                     TVVMAFKFTIPGRITRWLMVSRAPNYVIPICTLIQIVLCGIYLGTSPPFLDQDPYSEH
                     DHILIVCNKGSDVVFHCILGYLCFLALGSCVMAFLSRNLPDTFNESKLLSFSMQVFLC
                     VWVTFLPVYHSTKGKVMVAMQVSSILASSAGILGFIFAPKCYIILLRPDQNSLHHIRN
                     TAYTRRNKPL"
     exon            1..224
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /inference="alignment:Splign:2.1.0"
     exon            225..531
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /inference="alignment:Splign:2.1.0"
     exon            532..1338
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /inference="alignment:Splign:2.1.0"
     exon            1339..1554
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /inference="alignment:Splign:2.1.0"
     exon            1555..1678
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /inference="alignment:Splign:2.1.0"
     exon            1679..2601
                     /gene="Vom2r9"
                     /gene_synonym="RGD1564755"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtatgtta ataggatgtt ctgtgttttt attccttggt ctatgcagat tcccactttt
       61 gagtgtgcct ttcaatattc tgagtgctat tttagattca aagaaaattt tcactgtgaa
      121 ggaaatgtgg taattggtgc tttttttcca cttcatactt tttacactgc aaacaaaact
      181 gcttatggaa atgtgatgaa ctactacaag gacttttacc taaagtataa gtttaataat
      241 taccaatttg ttctggcctt ggtatttgcc attgaagaga tcaataagaa tccccatctt
      301 ctttccaaca tatccctggg atttcatgtt tataatgttc catacactga aaagaacact
      361 cttatgagta ctttgatttg gctcacaggg cagagaaact tcatgcctaa ttacaattgt
      421 agaatgaata gaatgtcagc tgctgcactc acaggtacat catgggcaac atctgcccag
      481 attgggacac tgctgcaact gtacaaattc ccacaggtga gggagattat tcttaccttt
      541 gggccttcag atcctatctt aagtgacaga ggtcagtttt cctctctcta ccagatggct
      601 cccaatgaca caactctatc acttgccatg gtttctctga tgcttcattt caattggtcc
      661 tgggttggcc tgcttctcat agatgaccac aaagggactc atatactctc acacttgaga
      721 gaagaaatgg ataggagtaa aatatgtcta gctcttgtgg aaatgatccc agtcacctgg
      781 acttcatttt cctataattt ctggaaaaat ttaaagaaga tccaggaatc attggccaat
      841 gtttttatta tttatggaga cattgattct ctccaaggtt taatggacaa tctaggacaa
      901 caattaataa catggaaagt ttggatcatg aactcacaat gggatagtac aaaacaagct
      961 gattattttc tgttagactc attccatggg agtctcattt tttcacacca tcacgaagag
     1021 agttttgagt tctctaattt tatcagaaag gtaaatcctt acaaataccc agaagaccct
     1081 tatcttccta agttgtggta tgcacttttc aactgctcat tttctaaatt tgattgtcaa
     1141 cttttggaaa actgtcagcc aaatgcttcc ttggaattgt tccctacaac cattattgac
     1201 atgagcatga gtgaagagag ttataacata tacacttctg tgtatgctgt ggcccacact
     1261 cttcaggaga tgagtcttca acaatgtcaa atgcaatcac atttaaaagg ggaaaaaatg
     1321 gtcttctttc cttggcagct tcaccatttc ctgaggaaga ttcatgaagg agaccatatg
     1381 agtttagagt ggaaatggag gttcattgaa gaatatgata ttctcaattt ctggaacttt
     1441 ccaaagggtc ttggactaaa ggtgaaagta ggaacctttt ctctggatgc tccccagggt
     1501 gaacaattgt ctttatctga gcatatgata caatggccaa caaaatttac acagattcct
     1561 cagtctgcat gctataccag ctgctggcca ggattcagaa aggctactca gaaaggtagg
     1621 gctgtatgct gctatgactg cattccttgc ctagacaacg aaatttccaa tgaaacagat
     1681 gttgatcagt gtgtgaagtg tccagaaact cattttccaa atacagagaa gaacaactgt
     1741 ctgcagaaat ctatgagctt tcttgaatat aatgacaatc tgggcatggt ccttattacc
     1801 atagcccttt gcttctctgc cttaacactt gcagttcttg gagtctttgt gaaatacaga
     1861 gacactccaa ttgtcaaggc caataatcgg actctcagtt acatcctgct catgacactt
     1921 gttgtctgtt ttctttgttc cttactcttc attggtcatc caaacacagc gacctgcctc
     1981 atgcagcaga ccacatttgg aattgtgttc actgtggctc tctctactgt cttagccaaa
     2041 gttattactg ttgttatggc ttttaagttc actattccag ggagaataac aaggtggtta
     2101 atggtatcta gggccccaaa ctatgtaatt cccatctgta ccctgatcca aattgtgctt
     2161 tgtggaatct acctgggaac ctctcctccc ttccttgacc aagatccata ttcagaacat
     2221 gatcacatcc ttattgtatg caacaagggt tcagatgttg tctttcattg catcctggga
     2281 tacctctgct ttttggcact tggaagttgt gtcatggcct tcttgtccag gaatcttcca
     2341 gatactttca atgaatcaaa actcttgtca tttagtatgc aagtgtttct ctgtgtctgg
     2401 gttacattcc tacctgtcta ccatagcacc aaggggaagg tcatggtagc tatgcaagtc
     2461 tcctctatct tagcttccag tgcaggaatc ttaggcttta tctttgcccc taagtgctat
     2521 attattttgt taagaccaga ccagaactca cttcatcata ttaggaacac agcatataca
     2581 agaagaaata aaccacttta a
//
