LOCUS       NM_001111321            2556 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 80 (Vom2r80), mRNA.
ACCESSION   NM_001111321 XM_001061151 XM_577747
VERSION     NM_001111321.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            On or before Dec 14, 2007 this sequence version replaced
            XM_577747.2, XM_001061151.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-197               JAXUCZ010000001.1  71494406-71494602
            198-483             JAXUCZ010000001.1  71496286-71496571
            484-1284            JAXUCZ010000001.1  71496871-71497671
            1285-1512           JAXUCZ010000001.1  71499230-71499457
            1513-1636           JAXUCZ010000001.1  71504731-71504854
            1637-2556           JAXUCZ010000001.1  71506967-71507886
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..2556
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /note="vomeronasal 2 receptor, 80"
                     /db_xref="GeneID:502285"
                     /db_xref="RGD:1559687"
     CDS             1..2556
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /codon_start=1
                     /product="vomeronasal 2 receptor 80 precursor"
                     /protein_id="NP_001104791.1"
                     /db_xref="GeneID:502285"
                     /db_xref="RGD:1559687"
                     /translation="MFTLILFFLLLNNPVHVAGFNYPTCSWRIKQNRGKGGNSETDCI
                     FLILPVKGPVEKDDFKPLLNTQTLTENHKHALVLAFSVNEINRNPDLLPNMSLTMDIP
                     SCNWTSKFRNTIYDSLHNYKILPNYSCQDNLLCVVALTGGNWATTLLLYTVLSYFIYQ
                     QFFLLTYRPFHPALHDHENFPYLYQMSSDDTSLALALVSFIIHFSWNWIGLAISDNEQ
                     STHFLSYLKRGMERNTVCFAFVSMIPVDMDLYMSRAEVYYNQIVTSSTNVVIIYGDTG
                     GTLAVSFRMWESLGLQKLWITTTRWDVTPSKKDNLYGLFAFGHHHGEIPGFKNFVQTL
                     NPVTSSDENLAKLEWMYFNCEVSASKCKALKNCSSNHSLEWLMAHTFEMTFTEGSYDI
                     YNAVYAAAHVFHEINLQIFHNPPIAKGKVQNYVCNKLGSSLRKIHFTNPVGDRINMNQ
                     RDKQQEIYDIFYIWNFPQGLEFKVKIGLFSPYFINGQQLHLSGDMIEWARGSTQMPTS
                     VCSSDCGPGFRKFRKKEMSACCFDCNPCPENEISNETNVEMCILCPEDQYANTGQNHC
                     IQKALIFLTYEDPLGRVLSLMALGFSAFTALVLGIFLKHHHTPIVKANNSTLTYILLI
                     SLIFCFLCPLLFIGLPDLATCILQQITFGVVFTVAISTVLAKTITVILAFKVTAPQRM
                     MKYFLVSRVPNYIIPICTLLELLVCAVWLGAFPPSVDIDDQSEHGHIIIICNKGSVTA
                     FYCVLGYLACLAFVSFTLAFLSRNLPSTFNESKSITFSMLVVCSVWVTFLPVYHSTKG
                     KVMVAVEIFSILASSSGMLLCIFVPKCYIILFRPDRNSFQMIREKSSSHTHIS"
     exon            1..197
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /inference="alignment:Splign:2.1.0"
     exon            198..483
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /inference="alignment:Splign:2.1.0"
     exon            484..1284
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /inference="alignment:Splign:2.1.0"
     exon            1285..1512
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /inference="alignment:Splign:2.1.0"
     exon            1513..1636
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /inference="alignment:Splign:2.1.0"
     exon            1637..2556
                     /gene="Vom2r80"
                     /gene_synonym="RGD1559687"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttcactc tgattttatt cttcttgctc ttgaacaatc cagttcatgt ggctggtttt
       61 aattatccca cctgctcttg gagaataaag cagaatagag gcaagggtgg aaactcagaa
      121 actgactgta tcttcttgat tctaccagta aaagggcctg tggagaaaga cgatttcaag
      181 cctcttttga atacacaaac actcactgaa aaccacaagc atgctctagt cttggctttt
      241 tccgtaaatg aaatcaacag gaacccggat cttttgccaa atatgtctct aacaatggat
      301 ataccaagtt gtaactggac atccaaattt agaaatacca tttatgatag tttacataat
      361 tataaaattc tccctaatta ttcctgtcag gataacctcc tgtgtgtagt ggcacttaca
      421 ggaggaaact gggcaacaac tctgttactt tatacagtct taagctactt catatatcag
      481 cagttctttc ttctgactta tcgacctttc catcctgccc tgcatgatca tgaaaacttt
      541 ccctatctat atcagatgtc ctctgatgat acatctctag cccttgccct ggtgtctttt
      601 ataatacatt tcagttggaa ctggataggg ttggccatct cagacaatga acaaagtacc
      661 cattttctct catatttgaa aagagggatg gaaagaaata cagtctgctt tgcttttgtc
      721 agcatgattc cagtcgatat ggatttatac atgtcaagag ctgaagtgta ttacaaccaa
      781 attgtgacat catctacaaa tgttgttatc atttatggtg acacaggtgg tactttagct
      841 gtgagtttta gaatgtggga atctctaggt ttacagaaat tatggatcac caccacacgg
      901 tgggatgtca ctcctagtaa gaaagacaat ttatatgggt tatttgcttt tggacaccac
      961 catggtgaga ttcctggttt taaaaatttt gtccagacat tgaaccctgt cacatcctca
     1021 gatgaaaatc tggcaaagct ggagtggatg tactttaact gtgaagtctc agcatctaaa
     1081 tgtaaggcac tcaagaactg ttcatctaat cactcactgg aatggctaat ggcgcatact
     1141 tttgaaatga cctttactga aggaagttat gacatataca atgctgtgta tgctgctgcc
     1201 catgtatttc atgagattaa tttgcaaatc tttcataatc cgcccattgc caaagggaaa
     1261 gtacaaaatt atgtctgcaa taagctgggt tcctctttga gaaagatcca cttcactaat
     1321 cctgttggag acagaataaa tatgaatcaa agagacaaac agcaagaaat atatgacatt
     1381 ttctacattt ggaattttcc acagggactt gaatttaaag tgaaaatagg actatttagt
     1441 ccctatttta taaatggtca acagttacat ttatctggag atatgataga gtgggcaaga
     1501 ggaagtacac agatgccgac ctctgtgtgc agttctgatt gtggtccagg atttagaaaa
     1561 ttcaggaaga aggaaatgtc agcctgctgt tttgattgca atccctgccc agaaaatgaa
     1621 atttctaatg agacaaatgt ggagatgtgt atcctgtgcc cagaggacca atatgccaac
     1681 acagggcaga atcactgcat tcaaaaagct cttatctttc tcacttatga agacccccta
     1741 gggagggtac tttctttaat ggccttgggc ttctctgcat tcacagctct ggttcttggc
     1801 atctttctga agcaccacca tactcccatt gttaaggcca ataacagcac tcttacctac
     1861 atcttgctca tctccctcat tttttgtttc ctttgcccct tgctcttcat tggccttcca
     1921 gacttggcca catgcatcct gcagcaaatc acatttggag ttgtattcac agtggctatt
     1981 tccacagtgt tagccaaaac aattactgtc attctggcat tcaaagtcac agcccctcaa
     2041 agaatgatga aatattttct tgtttcacga gtacctaact acatcattcc catctgtact
     2101 ctccttgaac ttcttgtctg tgcagtctgg ttaggagctt ttcctccttc tgtggacatt
     2161 gatgatcaat cagagcatgg tcacatcatc attatttgca acaagggttc agtcactgct
     2221 ttttactgtg ttctgggata cctggcctgc ctggcctttg tgagctttac attggctttc
     2281 ctttccagaa acctgcctag caccttcaat gaatccaagt ctataacatt cagcatgctg
     2341 gtggtctgca gtgtctgggt cactttcctc cctgtttacc atagcaccaa aggcaaggtc
     2401 atggtggctg ttgagatctt ttccattttg gcttccagtt cagggatgct gctttgcatc
     2461 tttgttccca aatgttacat aatactgttt agaccagaca gaaattcctt tcaaatgatc
     2521 agggagaaat catcttccca tactcacatt tcctaa
//
