LOCUS       NM_001099504            2595 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 79 (Vom2r79), mRNA.
ACCESSION   NM_001099504 XM_001058868 XM_236799
VERSION     NM_001099504.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000009.1.
            
            On or before Aug 18, 2007 this sequence version replaced
            XM_001058868.1, XM_236799.4.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-209               JAXUCZ010000009.1  2592854-2593062
            210-501             JAXUCZ010000009.1  2601754-2602045
            502-1308            JAXUCZ010000009.1  2602774-2603580
            1309-1536           JAXUCZ010000009.1  2604562-2604789
            1537-1687           JAXUCZ010000009.1  2619339-2619489
            1688-2595           JAXUCZ010000009.1  2639468-2640375
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..2595
                     /gene="Vom2r79"
                     /note="vomeronasal 2 receptor, 79"
                     /db_xref="GeneID:301137"
                     /db_xref="RGD:1588571"
     CDS             1..2595
                     /gene="Vom2r79"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 79"
                     /protein_id="NP_001092974.1"
                     /db_xref="GeneID:301137"
                     /db_xref="RGD:1588571"
                     /translation="MLTMYTLIPYFLTLTLAMLLCNLVLPKCSISLTENVYKEGDMVL
                     NFFLPLYVYQTSQHTEGAESTHIYPRISLNNYQFVMALLFATEEINKNSLLLPNMSLG
                     YSIYIAGPTQKDTVHNLLTWLTGQENFLPNYNCKKEEKSVAAITGQTWEISLLIGTVL
                     GLYKYPQLTIGPFEPKMNDPVKFPSLYQMATKESSLALGMVSLIVHFRWNWVGLITSD
                     DDKAVHFVSDLIPELERNTVCVAFIEMISVTHMFFMNVNDVYNSPIVRKSAKVIIIYG
                     DSDSSLGVFFRRWEHILPWRIWVTTSQWEVTTAMRHFMLDSFHGTLIFSQHHGEIITF
                     KDFVKTVTPAKYSNDIFLARLWEIYFDCALSNGTCKSSKNCSSRGSLEWLPWYHFDMA
                     MSPVSYHVYNAVYAVAHSLHKIVMQQIDMEEMRNGGRMKISPWKLNPILKNIQFTNPG
                     GDAVTLNPSEKLHEDYDILNFWNFPQGLGYKEKVGTFSTYFPPGQQLSLSEDRIQWNT
                     GDEQIPTSVCSENCSPGFRKSFHEGKYACCFECSLCPENEISNGTGKCMHAWKMYIDD
                     CVKCPEDHYANTVRTHCLRKAVIFLTYKNSLGMTFSGIALCLSLLTTLVLGIFVKHQK
                     TPVVKANNITFSYILLISLIFCFLCSFLFIGEPNTPICILQQTVFGIVFTVAVSTVLA
                     KTITVVLAFKISSPGRRMKGLLILLAPKFIILICTLIQIFFCGIWLGTSPPFVDKDSK
                     SEHGKIIILCNKGSVTAFYCVLGYLGSLSIVTFTVAFLARNLPDMFNEAKFLTFSMLI
                     FCSVWITFLPVYHSSKGRIMVVLEVLSILTSSTGLLGCIFFPKCYIILLRPDRNSLKV
                     MKDNILWK"
     exon            1..209
                     /gene="Vom2r79"
                     /inference="alignment:Splign:2.1.0"
     exon            210..501
                     /gene="Vom2r79"
                     /inference="alignment:Splign:2.1.0"
     exon            502..1308
                     /gene="Vom2r79"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..1536
                     /gene="Vom2r79"
                     /inference="alignment:Splign:2.1.0"
     exon            1537..1687
                     /gene="Vom2r79"
                     /inference="alignment:Splign:2.1.0"
     exon            1688..2595
                     /gene="Vom2r79"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgctcacaa tgtatacttt gattccttac ttcttgaccc tgacactcgc tatgctccta
       61 tgcaacttgg ttttgccaaa gtgttcgatc tcattgacag agaatgtata caaagaaggc
      121 gatatggtgc tcaatttttt cttaccactt tatgtttatc aaacctccca acatactgaa
      181 ggtgcagaga gtacacacat ttatccacgg atcagtctca ataattatca atttgtgatg
      241 gctttgttat ttgccactga ggagatcaat aagaattccc ttcttttacc taacatgtct
      301 ttgggataca gtatctacat tgctgggcca actcaaaaag atacagtgca caatctcctc
      361 acttggctca cagggcagga aaatttcctc ccaaactaca actgcaaaaa agaagaaaaa
      421 tctgtggcag caataacagg acaaacatgg gaaatctctt tactaattgg cacagttttg
      481 ggactttata aatatccaca gctgaccatt ggaccttttg aaccaaaaat gaatgaccct
      541 gtgaagtttc cttctctgta tcagatggcc acaaaggaat cttctctggc cttaggcatg
      601 gtctcattga ttgttcattt caggtggaac tgggtggggc tgatcacttc agatgatgac
      661 aaagctgttc actttgtctc agacttaata ccagagttgg aaagaaacac agtctgtgtg
      721 gcctttatag aaatgatctc agtcacccat atgttcttca tgaatgtcaa tgatgtctac
      781 aatagcccaa ttgtgagaaa atcagccaaa gttatcatca tttatggtga cagtgattcc
      841 tccttaggtg tgttttttag aagatgggaa catatacttc catggagaat ctgggtcacc
      901 acttcacaat gggaagtcac tactgctatg agacatttta tgcttgactc attccatggg
      961 actctaatat tttcacaaca ccatggtgaa attattactt ttaaagactt tgtaaagaca
     1021 gtcacccctg ctaaatactc aaatgacatt ttccttgcaa ggttgtggga gatttatttt
     1081 gattgtgcac tctctaatgg tacctgtaaa tcgtcaaaaa attgttcatc tagaggttct
     1141 ctggaatggt taccttggta ccactttgac atggccatga gtcctgtcag ttaccatgtg
     1201 tacaatgctg tgtatgctgt ggcccacagc ctgcacaaga tagttatgca acaaatagac
     1261 atggaagaaa tgagaaatgg aggaagaatg aaaatttccc cctggaagct gaaccccatc
     1321 ctgaagaata ttcaattcac aaatcctggt ggagatgcag taacattgaa tccttcagaa
     1381 aaattgcatg aagactatga cattctgaac ttctggaatt ttccacaagg cctcggatat
     1441 aaagaaaaag taggaacatt ttccacatat tttccacctg gtcaacaatt gtcattgtca
     1501 gaagacagga tacagtggaa cacaggagat gaacagattc ccacatctgt atgcagtgaa
     1561 aattgtagtc ctggatttag gaaatctttt catgaaggca agtatgcctg ctgttttgaa
     1621 tgcagcctct gcccagaaaa tgaaatctca aatggaacag gcaagtgcat gcatgcatgg
     1681 aagatgtata ttgacgattg tgtgaagtgt ccagaggatc attatgccaa cacagtaaga
     1741 acccactgcc tccgaaaagc agtgatattt ctaacttata aaaattcctt ggggatgaca
     1801 ttttctggta ttgccctgtg cttatctcta ctaaccacac ttgttcttgg gatttttgtg
     1861 aagcaccaaa agactcctgt tgtgaaggcc aataacatta ctttcagcta catactgctc
     1921 atctccctaa ttttctgttt tctttgctca tttctattca ttggtgagcc gaacacacct
     1981 atctgcatct tgcaacagac agtatttgga attgttttca cagtagctgt gtctactgtc
     2041 ttggctaaaa ccattacagt ggttctggcc tttaagatct caagtccagg aagaagaatg
     2101 aaggggttgc ttatattatt ggcacccaaa ttcatcattc tgatctgtac tcttatacaa
     2161 attttctttt gtggaatttg gctgggaaca tcgccgccct ttgtggacaa ggattcaaaa
     2221 tctgaacatg gtaagatcat catactgtgc aacaagggct cagtcacagc gttctactgt
     2281 gtcctgggat acctggggtc tttgtccata gtgaccttca cagtagcttt tttggccaga
     2341 aatttacctg acatgttcaa tgaagccaag ttcctgacat tcagtatgct cattttctgc
     2401 agtgtctgga tcaccttcct cccagtctac cacagtagta agggaaggat catggtggtt
     2461 ttggaggtct tatcaatctt gacctccagt acagggctcc taggctgtat cttttttccc
     2521 aagtgctata ttattctcct gaggcctgat aggaactcat tgaaagtcat gaaagataac
     2581 attctgtgga aatag
//
