LOCUS       NM_001419359            2550 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 71 (Vom2r71), transcript
            variant 1, mRNA.
ACCESSION   NM_001419359 XM_039092458
VERSION     NM_001419359.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Mar 31, 2023 this sequence version replaced XM_039092458.1.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               JAXUCZ010000014.1  730814-731019       c
            207-489             JAXUCZ010000014.1  725433-725715       c
            490-1293            JAXUCZ010000014.1  724270-725073       c
            1294-1518           JAXUCZ010000014.1  723293-723517       c
            1519-1642           JAXUCZ010000014.1  714492-714615       c
            1643-2550           JAXUCZ010000014.1  706671-707578       c
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2550
                     /gene="Vom2r71"
                     /note="vomeronasal 2 receptor, 71"
                     /db_xref="GeneID:689060"
                     /db_xref="RGD:1597426"
     CDS             1..2550
                     /gene="Vom2r71"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; vomeronasal type-2 receptor 116-like;
                     vomeronasal type-2 receptor 26-like"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 71 isoform 1 precursor"
                     /protein_id="NP_001406288.1"
                     /db_xref="GeneID:689060"
                     /db_xref="RGD:1597426"
                     /translation="MKKMCAFTISSLLLKFSLILCSFTEPSCFWRIQNNEDNDGDLRS
                     DCGFVLITYEGPIEENFYNNVINFRIPARRYEVFLVLLFATDEINRNPYLLPNMSFMF
                     SRIVGMCEDTLGSLERKYTPQSNSWKFINYNCGIQEVCDVQLTGPSWTTSLKLAINSR
                     NPKVFFGPFNPNLSDHDQFPYVYQVATEDTCLSHAMVSLMLHFRWTWIGLVITDDDQG
                     IQLLTDLREEMERHGMCLAFVNMIPETMQIYMTKAKIYDNQIMTSSAKVVIIYGEMNS
                     TLEVSFRRWAYLAAQRIWITTSQWDVITTRKDFSLDFFHGTFTFAHHNVELPKFRHFM
                     QTMNTSKYPVDISQSMLGWNYFNCSISKNSISKIDHFTLNNTLEWLAQHKFDMFLSEE
                     GYNLYNAVYAVAHTYHELILQVESQKMAEPKGLFTDCQQVALLLKTRAFTTPVGELVN
                     MNHRENQCAKYDISIAWNFPQGLGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTLIP
                     TSMCSVACIAGFRKIHQKQVTHCCFDCAHCPENEVSNETADMEQCVRCPDDKYANLEQ
                     TYCLQRVVSFLAYEDPLGMALGCTALCFSTLTVLILFTFLKYKDTPIVKANNCLLSYI
                     LLISLIFCFLCSLLFIGHPNHITCILQQTTFGVFFTVAISTVLAKTITVVMAFKISTP
                     GNRMKGMLTSGAPNLVIPICTLIQLVLCGIWLGTSPPFIDRDIQSEPGKTIVICNKGS
                     IFAFHFTLGYLDSLTLMSFAVAFLARNLPDRFNEAKFLTFSMLVFCSVWITFLPVYHS
                     TKGKVMVVVEVFSILASSAGLLGCIFVPKCYVILVRTDSNFLQKYKDKFHY"
     exon            1..206
                     /gene="Vom2r71"
                     /inference="alignment:Splign:2.1.0"
     exon            207..489
                     /gene="Vom2r71"
                     /inference="alignment:Splign:2.1.0"
     exon            490..1293
                     /gene="Vom2r71"
                     /inference="alignment:Splign:2.1.0"
     exon            1294..1518
                     /gene="Vom2r71"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1642
                     /gene="Vom2r71"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..2550
                     /gene="Vom2r71"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaaga tgtgtgcttt caccatttcc tccttgctcc tgaagttttc tctcatcttg
       61 tgcagtttta ctgaacccag ttgcttttgg cggatacaga ataatgaaga taatgatgga
      121 gatttacgaa gtgactgtgg ttttgttctt atcacatatg agggacctat agaagaaaat
      181 ttttataata atgttatcaa ttttagaata ccagcaagaa gatatgaggt ctttttggtg
      241 ctgttatttg ctactgatga gatcaacagg aatccttatc ttttaccaaa catgtctttt
      301 atgttctccc gcattgttgg catgtgtgaa gatacattgg gatctctgga aagaaaatat
      361 acaccacaaa gtaattcttg gaaatttatt aattataact gtggaataca ggaagtatgt
      421 gatgtacaac ttacaggacc atcatggaca acatccttga aactggcaat taattctagg
      481 aatccaaagg ttttctttgg accatttaat cctaacctga gtgaccatga ccagtttccc
      541 tatgtctatc aggtagcaac cgaggacaca tgtttgtccc atgctatggt gtccttgatg
      601 cttcatttta ggtggacttg gataggactg gtcataacag atgatgacca gggaattcag
      661 ttactcacag acttgagaga agaaatggaa agacatggaa tgtgtttagc ttttgtgaat
      721 atgatcccag aaaccatgca gatatacatg acaaaagcta agatatatga caatcaaatt
      781 atgacatcat cagccaaggt tgttatcatt tatggtgaaa tgaactctac tctagaagtc
      841 agttttagaa gatgggcata tttagctgca cagagaatct ggatcacaac ctcacaatgg
      901 gatgtcatca caactagaaa agatttcagc cttgatttct tccatgggac tttcactttt
      961 gcacaccaca atgttgaact tcctaaattt aggcatttta tgcagacaat gaacacttcc
     1021 aaatacccag tagacatttc tcagtctatg ctggggtgga attattttaa ttgttcaatc
     1081 tctaagaaca gcattagcaa aatagatcat tttacattaa acaacacatt ggaatggtta
     1141 gcacagcaca aatttgacat gttcctgagt gaagaaggtt acaatttgta taatgctgtg
     1201 tacgctgtgg cccacaccta ccatgaactc attttacaag tagagtctca gaaaatggca
     1261 gaacccaaag gattattcac tgactgtcag caggtggctt tgttattgaa aaccagggca
     1321 tttactaccc ctgttggaga actggtgaac atgaatcata gggaaaatca gtgtgccaag
     1381 tatgacattt ccatcgcttg gaattttcct caaggccttg gattaaaagt gaaaatagga
     1441 agctatttcc cttgttttcc acagagccaa caacttcata tatctgaaga cttggagtgg
     1501 gccacaggag gaacactgat tcccacatcc atgtgtagtg tggcatgcat tgctggattc
     1561 aggaaaattc atcagaaaca agtaacacac tgttgctttg actgtgccca ttgcccagaa
     1621 aatgaggttt ccaatgagac agcagatatg gagcagtgtg tgaggtgtcc agatgataag
     1681 tatgccaact tagagcaaac ctactgcctc caaagagttg tgtcatttct ggcttatgaa
     1741 gatccactgg ggatggccct aggctgcaca gctctgtgct tctctaccct cacagttcta
     1801 atactcttca cctttttaaa gtacaaggat actcctattg taaaggccaa taactgcctt
     1861 ctcagctaca tcctgctcat ctctctaatc ttctgttttc tctgctcttt gctcttcatt
     1921 ggacacccca accatatcac ctgcatcctg cagcaaacca catttggagt atttttcaca
     1981 gtggctattt caactgtgtt ggccaaaaca ataactgtgg tcatggcttt caagatcagt
     2041 actccaggaa ataggatgaa aggaatgctg acctcagggg cacctaactt ggtcattccc
     2101 atttgtaccc taatccaact tgttctctgt ggaatctggt tgggaacatc tcctcccttt
     2161 attgaccgag atatacaatc tgaacctggc aagaccatcg ttatttgcaa caaagggtct
     2221 atctttgcct tccactttac cttgggatac ttggactctt tgactctgat gagctttgct
     2281 gtggcattct tggctaggaa ccttcctgac agattcaatg aagccaagtt tctaactttc
     2341 agcatgctgg tgttctgtag tgtgtggatc accttcctcc ctgtctatca cagcacaaag
     2401 ggaaaagtca tggtggtcgt ggaggtcttt tccatcttgg cttctagtgc aggattgcta
     2461 gggtgtatct ttgtgccaaa gtgttatgtt attttagtta gaacagattc aaattttctt
     2521 caaaaataca aagataaatt tcattattga
//
