LOCUS       NM_001099479            2574 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 58 (Vom2r58), mRNA.
ACCESSION   NM_001099479 XM_001067069
VERSION     NM_001099479.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Aug 15, 2007 this sequence version replaced XM_001067069.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-203               JAXUCZ010000012.1  8194249-8194451
            204-495             JAXUCZ010000012.1  8230050-8230341
            496-1302            JAXUCZ010000012.1  8231132-8231938
            1303-1530           JAXUCZ010000012.1  8248294-8248521
            1531-1654           JAXUCZ010000012.1  8287332-8287455
            1655-2574           JAXUCZ010000012.1  8300243-8301162
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p12"
     gene            1..2574
                     /gene="Vom2r58"
                     /note="vomeronasal 2 receptor, 58"
                     /db_xref="GeneID:501793"
                     /db_xref="RGD:1583708"
     CDS             1..2574
                     /gene="Vom2r58"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 58 precursor"
                     /protein_id="NP_001092949.1"
                     /db_xref="GeneID:501793"
                     /db_xref="RGD:1583708"
                     /translation="MMLLLIFMFLLLQYSSDVYSFDRSYCASTTKTSVYKDGDMVVAA
                     FLPLFTITVDSASDNPSNNNFYIQFNLKNYQIVLAMVYATEEINRNPHILPNVSLGYD
                     IYNVLFNEWFTLDRCITWLSGPKKYVPNYTCRREMKSIAALTGISWIISTGIRTLLEL
                     YRYPQLTIGSFDPNLNNHEQFHDIYQIAYKDMSLTHGIVSLLNYFHWNWVGLIVSEGQ
                     NGFQIISEVRAEMDRNKICVEFVELIRVSEVSYLPSYLLNPTHLVKSTTNVIITYGDS
                     DFLRGFMLYSRQIFVTRKVWIMNSDWDIITQSQHFILNSLHGSLIFAHHHKETSGYRN
                     FIQTVHPSKYPEDFYLTRFWFFLFNCSFADDDCNTLENCLPNASLHETTGNHFDMVMT
                     EFAYNMYNAVYAVAQSLHKMLLHEVEVRQVRKAEDLTFSVWQLHPFLKNIHFTNPVGE
                     QVSLDETMKLNAEYDILNYWNFPEGLHLKVKVGQFSPYGPVGQQLSLSEDIIEWPTEI
                     TETPRSVCSESCGPGFRKSLIEGKRICCFDCIPCPENEISNETDVDQCMQCLDNQYAN
                     TAQNHCLQKSITFLDYEDPMGIGLSCIALCFSALTSLVLGIFLKQKNTPIVKANNRTL
                     TYVLLIALNFCFLCSFLFIGHPNTATCILQQTTFAVLFTVAVSTVLAKTITVVLAFKV
                     TAPGRRIRWLLVTRAPNFTVPICTLIQIVLCGVWLGNSPPFIDTDTRSEHEHIIIMCN
                     KGSVTAFYCVLGYLGALALGSFTLAFLARNLPDTFNEAKFLTFSMLVFCSVWVTFLPV
                     YHSTKGKHMVVVEVFSILVSSAGLLGCIFAPKCYIILLRPQRKSLQGHRDKIHYNYKT
                     Y"
     exon            1..203
                     /gene="Vom2r58"
                     /inference="alignment:Splign:2.1.0"
     exon            204..495
                     /gene="Vom2r58"
                     /inference="alignment:Splign:2.1.0"
     exon            496..1302
                     /gene="Vom2r58"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1530
                     /gene="Vom2r58"
                     /inference="alignment:Splign:2.1.0"
     exon            1531..1654
                     /gene="Vom2r58"
                     /inference="alignment:Splign:2.1.0"
     exon            1655..2574
                     /gene="Vom2r58"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatgcttc ttctgatttt tatgttcctg cttctgcagt attccagtga tgtctactcc
       61 tttgaccgct cttactgtgc ttcaacgaca aaaactagtg tatacaagga tggagatatg
      121 gtagttgctg catttttacc tctttttact attactgtgg attctgcatc tgataatcca
      181 agcaataata atttctatat tcaatttaat ttaaaaaact accagattgt tctggcaatg
      241 gtttatgcca ctgaggagat caacagaaac ccccatattt tacccaatgt gtctctggga
      301 tatgatatat ataatgtcct cttcaatgaa tggtttacat tggatagatg catcacatgg
      361 ctttctgggc cgaagaagta tgtgccaaat tacacgtgta ggagagagat gaagtcaatt
      421 gcagccctaa caggcatatc ttggataata tctaccggta taaggacact gctagaactc
      481 tacagatatc cgcagctgac cattgggtct tttgacccta atctgaataa tcatgagcag
      541 tttcatgata tttatcaaat agcatacaag gacatgtctc tcacccatgg cattgtctcc
      601 ttgttgaatt atttccactg gaactgggta ggactgatcg tatctgaagg acaaaatggt
      661 tttcagataa tctcagaagt tagggcagaa atggatagaa acaaaatatg tgtagaattt
      721 gtggaattga tccgagttag tgaagtatct tatttaccaa gctacctatt gaatcctaca
      781 catcttgtga aatcaacaac aaatgtgatc atcacctatg gtgacagtga ttttctgaga
      841 ggctttatgc tttattcaag acaaattttt gttacaagga aagtctggat catgaactca
      901 gactgggata ttatcaccca gtcacagcat ttcattttaa attcattaca tggaagcctc
      961 atctttgcac atcaccacaa agaaacctct ggttacagaa attttatcca aacagttcat
     1021 ccttccaaat acccagaaga tttttacctt acaaggtttt ggttcttcct ttttaactgc
     1081 tcatttgctg atgatgactg caatacactg gagaactgtc tacctaatgc ttccttgcat
     1141 gaaacaacag ggaaccattt tgacatggtc atgactgagt ttgcttataa tatgtacaat
     1201 gcggtgtatg ctgtggccca aagccttcac aagatgcttc ttcatgaagt agaagtaaga
     1261 caagtaagaa aggcagaaga cctgacgttt tcagtctggc agctgcaccc ttttctgaag
     1321 aatattcatt ttactaatcc cgttggagaa caagttagtt tggatgagac aatgaaattg
     1381 aatgcagagt atgatattct caactactgg aactttcctg aaggtcttca tcttaaggtg
     1441 aaagttggac aattttcccc ttatggtcca gtaggtcaac aattatcttt atctgaggac
     1501 ataatagaat ggcccaccga aattacagag actcccaggt ctgtatgcag tgaaagttgt
     1561 ggtcctggat ttagaaaatc cctcatagaa ggaaaaagga tctgttgttt tgactgcatt
     1621 ccatgcccag agaatgaaat ttccaatgag acagatgtgg atcagtgtat gcagtgtcta
     1681 gacaatcaat atgccaacac agcacaaaac cactgcctcc aaaagtctat caccttcctg
     1741 gattatgaag accccatggg gataggtctg tcctgcatag ccttgtgctt ctctgcacta
     1801 acatctctag ttcttggcat ctttctgaag cagaagaaca ctcccattgt gaaggcaaat
     1861 aaccgcactc tcacctacgt cctgctcatt gcccttaact tctgttttct ctgctctttt
     1921 ctcttcattg gccatcccaa cacagccact tgcattctgc aacagaccac atttgcagtg
     1981 ctgttcactg tggctgtttc cacagtcttg gccaaaacaa ttaccgtggt cctggccttc
     2041 aaggtcactg ctccaggaag aagaatcagg tggttgttgg taacacgggc acctaacttc
     2101 acagtaccca tctgtacctt gatccaaatt gtcctgtgtg gagtctggct gggaaactcc
     2161 cctccgttca ttgacacaga tacacgctct gaacatgaac atatcatcat catgtgcaac
     2221 aagggctcag tcactgcctt ctactgtgtg ctgggttacc tgggggctct agctctggga
     2281 agcttcacct tggctttctt ggccaggaac ctacctgaca ccttcaatga agccaagttc
     2341 ctgacattca gcatgctggt gttctgcagt gtctgggtca ccttcctccc tgtctaccac
     2401 agtactaagg ggaagcacat ggtagttgtg gaagtcttct ccatcttggt ctccagtgca
     2461 ggacttctag gctgcatctt tgcccccaag tgctacatta ttttgttaag accacaaagg
     2521 aagtctcttc agggtcacag ggacaaaata cattataatt ataagactta ttaa
//
