LOCUS       NM_001099484            2586 bp    mRNA    linear   ROD 07-MAY-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 56 (Vom2r56), mRNA.
ACCESSION   NM_001099484 XM_001079237 XM_578648
VERSION     NM_001099484.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000007.1.
            
            On or before Jul 26, 2007 this sequence version replaced
            XM_578648.2, XM_001079237.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-215               JAXUCZ010000007.1  18008573-18008787   c
            216-516             JAXUCZ010000007.1  18001872-18002172   c
            517-1323            JAXUCZ010000007.1  17997705-17998511   c
            1324-1551           JAXUCZ010000007.1  17997083-17997310   c
            1552-1675           JAXUCZ010000007.1  17996686-17996809   c
            1676-2586           JAXUCZ010000007.1  17986435-17987345   c
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..2586
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /note="vomeronasal 2 receptor, 56"
                     /db_xref="GeneID:503127"
                     /db_xref="RGD:1559561"
     CDS             1..2586
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /codon_start=1
                     /product="vomeronasal 2 receptor 56 precursor"
                     /protein_id="NP_001092954.1"
                     /db_xref="GeneID:503127"
                     /db_xref="RGD:1559561"
                     /translation="MADMEKAYTLIVFFLLLRLSFILCSFPEATCFWRINHNENLESN
                     MRKDCGFILFTIPVHLVEDHFRVLLDFPLPVNTYPYVLVMLFAIEEINKNPNLLPNST
                     LGFTFLGDQCDITSTDLNNLNMLSKSGEMNPNYICEYSFCDVALTGPTWTVSARVGTL
                     LQLFKIPQVMLSVTYGPFHDSLSDRDLFPHLYQIAPKDTSLVLAMVSLMIHFLWKWVG
                     LVILDDDQGVQFLSDMKEEVKTNEICLAFVNMIPANMQLYIERAETYYFQIMTSSANV
                     VIIYGNVNSTLEVSFRRWEMLGIWRLWITTSQWDVISRSRDFTIDSFHGTLSLSHHYQ
                     EISTFKHFIQKTNFSAYPEAVSLVRLGWIYLNCSVSVCECKTLNHCLSNTILELLPWH
                     SFDMAMNDERYNIYNAVYAVAHAFHNMRLQQVDIKVLESWEGLIPRCMQVNDFLKNVR
                     LINPIGDPVNINQGRNLDAMYDIFNVLNFPQGYVLKVKVGQFSPYFAHDQQLFLSEDM
                     IEWATGSRQFSTSVCSMPCHPGFKKSHQEGKADCCFDCSRCPANEISNTTDSEECVKC
                     PEDWYADTEQTHCLPKAVTFLAYEDPLGMALVCLALCFSVLTALVLGVFLKHRETPIV
                     KANNRTLSYILLTALIFCFLCSLLFVGNPNTTTCILQQTTFGILFTVSVSTVLAKTLT
                     VVLAFRITLPGRRMRGLMVSRIPKYIIPICTVVQIILYGIWLWTSPPFVDIDTHSEHG
                     CITITCSKGSVMAFYCVLGYLGSLALVSFTVAFLARNLPDTFNEAKFLTFSMLVFCSV
                     WITFLPVYHSSKGKVMVAVEVFSILASSMGLLGCIFIPKCYIILLRPDRNSIQKFRDK
                     TQMNQ"
     exon            1..215
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /inference="alignment:Splign:2.1.0"
     exon            216..516
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /inference="alignment:Splign:2.1.0"
     exon            517..1323
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /inference="alignment:Splign:2.1.0"
     exon            1324..1551
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /inference="alignment:Splign:2.1.0"
     exon            1552..1675
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /inference="alignment:Splign:2.1.0"
     exon            1676..2586
                     /gene="Vom2r56"
                     /gene_synonym="RGD1559561"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcagaca tggaaaaggc gtacactttg attgtgttct tcctgctgct gagactttct
       61 ttcatcttgt gcagttttcc agaagccact tgtttttgga gaataaatca caatgaaaat
      121 cttgagagca acatgaggaa ggactgtggt ttcatccttt tcacaatacc tgttcatcta
      181 gtggaagatc acttcagggt gctgctggat tttcctttgc cagtgaacac atacccatat
      241 gttctggtaa tgctttttgc catagaagag atcaacaaga accctaatct tttacctaac
      301 tctaccttgg gatttacctt tcttggagac cagtgtgaca ttacatcaac agatctcaat
      361 aacctaaaca tgctctcaaa gtctggtgag atgaatccta attatatctg tgagtatagt
      421 ttctgtgatg tagcacttac aggaccaaca tggacagttt ctgcccgagt gggaacactc
      481 ctgcagctct tcaaaattcc acaggtgatg ttaagtgtta catatggacc atttcatgat
      541 agtctgagtg accgtgatct gtttcctcat ttatatcaga tcgcaccaaa ggacactagc
      601 ctcgttcttg ccatggtatc cttgatgatt catttcctct ggaaatgggt gggactggtt
      661 atcttagatg atgaccaggg tgttcagttt ctctcagata tgaaagaaga agtgaagaca
      721 aacgaaattt gtttagcttt tgtgaatatg atcccagcaa acatgcagtt atacatagaa
      781 agggctgaga cttattattt tcaaataatg acatcatcag caaatgttgt catcatttat
      841 ggtaatgtga actctactct agaagtgagc tttagaagat gggaaatgtt aggcatatgg
      901 agattgtgga tcactacctc acaatgggat gtcatctcaa ggtcaagaga cttcaccatt
      961 gactctttcc atggaacttt gtctttgtca caccattatc aggagatttc tacttttaag
     1021 cattttattc agaaaacaaa cttttctgct tacccagaag ctgtttctct ggtgagattg
     1081 ggatggatct atttgaactg ttcagtgtct gtatgtgaat gcaaaacact gaatcattgc
     1141 ttatctaata ctatattgga attattaccg tggcacagtt ttgacatggc catgaatgat
     1201 gagcgttaca acatatataa tgctgtttat gctgtggccc atgcctttca caatatgcgt
     1261 ctccaacaag tagatataaa agtattggaa agttgggaag ggctaattcc tagatgcatg
     1321 caggtaaatg actttctgaa gaatgtaaga cttatcaatc ctataggaga cccagtgaat
     1381 attaatcaag gaagaaattt agatgcaatg tatgacattt tcaacgtttt gaattttcca
     1441 caaggttatg tactaaaggt gaaagtagga cagttttctc cttattttgc acatgaccaa
     1501 caactcttct tatctgaaga catgatagag tgggccacag gaagtagaca gttttccact
     1561 tcggtgtgca gtatgccttg ccatcctggt ttcaagaaat cccatcagga aggaaaagca
     1621 gactgctgtt ttgattgttc ccgatgtcct gcaaatgaga tttccaacac aacagactca
     1681 gaggagtgtg tgaagtgtcc agaagattgg tatgccgaca cagagcaaac ccactgcctg
     1741 ccaaaagctg tgacatttct ggcttatgaa gatcctttgg ggatggctct tgtctgcctg
     1801 gccctgtgct tctctgtact tacagctctt gtccttgggg tctttctgaa gcacagagaa
     1861 actcccattg tgaaggctaa taaccgtact ctcagctaca ttctgctaac ggcccttata
     1921 ttttgctttc tctgctcctt gctctttgtt ggaaatccaa atactacaac atgtatccta
     1981 cagcagacta catttggaat tctgttcact gtgtccgtgt ccacagtctt ggccaaaact
     2041 cttactgtgg ttctggcctt caggatcact cttccaggca gaagaatgag gggattgatg
     2101 gtatcaagga tacctaaata catcattccc atctgtacag ttgtccaaat aattctctat
     2161 ggaatatggc tatggacatc acctcccttt gttgacattg atacacactc tgaacatggc
     2221 tgcatcacca tcacatgcag caaaggctca gttatggcat tctattgtgt tcttggatac
     2281 ttaggatctc tggccctagt gagcttcaca gtggctttct tggccaggaa tctacctgac
     2341 acattcaatg aagccaagtt cctgacattc agcatgctgg tgttctgcag tgtttggatc
     2401 accttccttc ctgtctacca tagctccaag ggaaaagtca tggtagcagt tgaagtgttt
     2461 tctattctgg cctccagtat gggcctgcta gggtgtatct ttatcccgaa atgctacatt
     2521 attttgttaa gaccagacag aaactcaatt caaaagttcc gagacaaaac acagatgaat
     2581 caatga
//
