LOCUS       NM_001099503            2583 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 52 (Vom2r52), mRNA.
ACCESSION   NM_001099503 XM_001061743 XM_216283
VERSION     NM_001099503.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Ryba,N.J. and Tirindelli,R.
  TITLE     A new multigene family of putative pheromone receptors
  JOURNAL   Neuron 19 (2), 371-379 (1997)
   PUBMED   9292726
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On or before Jul 26, 2007 this sequence version replaced
            XM_216283.4, XM_001061743.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN17050752 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-212               JAXUCZ010000004.1  158642014-158642225 c
            213-531             JAXUCZ010000004.1  158634464-158634782 c
            532-1341            JAXUCZ010000004.1  158630519-158631328 c
            1342-1566           JAXUCZ010000004.1  158622608-158622832 c
            1567-1690           JAXUCZ010000004.1  158619408-158619531 c
            1691-2583           JAXUCZ010000004.1  158604005-158604897 c
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2583
                     /gene="Vom2r52"
                     /note="vomeronasal 2 receptor, 52"
                     /db_xref="GeneID:297590"
                     /db_xref="RGD:735022"
     CDS             1..2583
                     /gene="Vom2r52"
                     /note="putative pheromone receptor V2R1"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 52 precursor"
                     /protein_id="NP_001092973.1"
                     /db_xref="GeneID:297590"
                     /db_xref="RGD:735022"
                     /translation="MKLFIAFSLLIVPIVFQKQICLALSIPASPGYYQDGDFVIGGLF
                     SLRVTSGDTKSKFGFKDTIYIPDIIYANQDYMASLEPNSPTKINMDYPNTPEKQDLVS
                     KSYLIMMLEDFKKDVENSLREQVEAYREESQKCLKEFQENTIKQLKELKMEIEAIKKE
                     HMETTLDIENQKKRQGAISYAPFDQSLGTGVQLQSPYQFPVHTTALYQGIIQLLLYFS
                     WVWVGLVVPDDVRGELFLRDITEEMNNHGLCVAFAEKVPEFPAKDTVNRGLFIERFTL
                     TRVIVAFGDTYSLLRFAYNIFCNTPFGNVWITTSDWDITTLSFRQNLSYTYFGGELSF
                     SVHTDEILGFKDFLRSVQPRKYPQDIFIQDVWSILFECPYTYLYGIRELSQCEQNGNL
                     STRLLYVWDMNTSPSSYKIHDAVYAIAQALHEELSFKLEENSLNKDVSKAPHLWKLHP
                     FLQNGQLGRSTNEEAVMNKEVSATKLDIFNYQSLQSGTKAQVKVGEFVFESYSVQNFS
                     LNDKLITWGEHHNQTPFSVCSQSCPLGFRKTPVEGKPFCCFDCLLCPDGEIANETDMD
                     QCIKCPEDQYPNTQRNQCLPKITDFLSHEDTLGAVLVFVALSFSAFSAMILRLFICYR
                     DTPIVRANNRNLSYLLLVSLMLCFFCSLIFIGQPKTVTCVLRQVIFGVVFSVAVSTIL
                     AKTFIVVVAFKAIKPGSALKMSMVIRLSNTIVFCGSIIQVCICAVWLGTYPPFPDVDM
                     HSEFGQIILWCNEGSTFAFYCVLGYLGFLASLSLLIAFLARRLPDSFNEAKTITFSML
                     VFFSVWISFVPTYLSSKGKTMVAVEILSILASSAGLLGCIFLPKCYVILMKSGDHSRK
                     KFFK"
     exon            1..212
                     /gene="Vom2r52"
                     /inference="alignment:Splign:2.1.0"
     exon            213..531
                     /gene="Vom2r52"
                     /inference="alignment:Splign:2.1.0"
     exon            532..1341
                     /gene="Vom2r52"
                     /inference="alignment:Splign:2.1.0"
     exon            1342..1566
                     /gene="Vom2r52"
                     /inference="alignment:Splign:2.1.0"
     exon            1567..1690
                     /gene="Vom2r52"
                     /inference="alignment:Splign:2.1.0"
     exon            1691..2583
                     /gene="Vom2r52"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaattat tcattgcttt ctctctcctt attgttccca ttgtattcca gaaacaaatt
       61 tgtttggcct taagtatacc tgcttctcct ggctactatc aagatgggga ttttgttatt
      121 ggaggactct tttcccttag agtgacttct ggagacacta aaagtaaatt tggcttcaaa
      181 gatacaatct atataccgga tatcatttat gcaaaccaag actacatggc atcattggag
      241 cccaattctc ccaccaaaat aaacatggat tatccaaaca caccagaaaa gcaagatcta
      301 gtttcaaaat cgtatttgat catgatgttg gaggacttca agaaagacgt ggagaactcc
      361 cttagagaac aagtagaagc ctacagagag gaatcgcaaa aatgcctgaa agaattccag
      421 gaaaacacaa tcaaacagtt gaaggaatta aaaatggaaa tagaagcaat caagaaagaa
      481 cacatggaaa caaccctgga catagaaaat caaaagaaaa gacaaggagc tatcagttat
      541 gctccctttg accagagtct tgggactgga gtccagctcc aatctcctta ccagtttcct
      601 gtgcacacca cagctctgta tcagggaatt attcaactgc tgctatactt ctcttgggtc
      661 tgggttggcc tggtggttcc agatgatgtg agaggagaac tcttccttag ggacatcaca
      721 gaggagatga acaaccatgg actttgtgtt gcatttgcag aaaaggttcc agaatttcct
      781 gctaaggaca cagtaaacag gggacttttt atagaaagat tcaccttgac ccgtgttatt
      841 gttgcatttg gtgacacata ttctcttctg agatttgcct ataacatctt ttgcaacacc
      901 ccttttggta atgtctggat cacaacttct gattgggata tcaccacatt atcctttcga
      961 caaaatctaa gttatacata ttttggtgga gaattatcat tttctgttca cacagatgaa
     1021 attctgggat tcaaagattt tctcagaagt gtccaaccta ggaaataccc tcaagatatc
     1081 tttatccagg atgtgtggtc gatcttattt gaatgtccat atacttatct atatggaatc
     1141 agggaactaa gtcaatgtga gcaaaatggc aacctgagca cacgacttct gtatgtttgg
     1201 gatatgaata cctcaccctc cagctacaaa atccatgatg ctgtatatgc cattgcccag
     1261 gcactccacg aggagctgtc attcaaactg gaagaaaact ctctcaataa agatgtatct
     1321 aaggcacctc atctatggaa gcttcatcca ttcttacaaa atggccagct tgggagaagc
     1381 accaatgagg aggctgtcat gaacaaggaa gtttcagcaa ccaagcttga catctttaat
     1441 taccagtctc tgcagagcgg taccaaagct caagtgaaag ttggcgagtt tgtctttgaa
     1501 tcttacagtg ttcagaattt ttccctaaat gacaaactca taacttgggg tgaacaccac
     1561 aatcagactc ctttttctgt ttgcagtcaa agttgtccac ttggatttag gaaaacacct
     1621 gttgaaggga aacccttctg ttgttttgat tgtctcctat gtccagatgg agagattgca
     1681 aatgaaacag atatggatca atgcatcaag tgtcctgaag atcaatatcc aaatactcag
     1741 aggaatcagt gtctccctaa aattacagat tttttgtctc acgaagatac tctgggagct
     1801 gttttggtct tcgtggccct tagtttttct gccttttcag ctatgatttt aagattattt
     1861 atctgctatc gggacacacc cattgtcaga gcaaataaca gaaatctcag ttatctcctc
     1921 ctcgtttctc taatgctctg tttcttttgc tcattaatat tcattggcca acctaaaaca
     1981 gtcacttgtg tcttgagaca agtgattttt ggggttgtat tttctgttgc tgtttctact
     2041 atcttggcaa agaccttcat tgtggttgtg gccttcaaag ccatcaaacc aggaagtgcc
     2101 ttaaaaatgt cgatggtgat ccgactctca aacactatag tcttctgtgg ttccatcatt
     2161 caagtgtgca tctgtgcagt ctggctggga acgtatcccc ctttccctga tgtcgacatg
     2221 cactcagagt ttgggcaaat catcctctgg tgtaatgaag gctctacctt tgccttctat
     2281 tgtgttctgg gctacttggg ctttctggcg agtctcagct tgcttattgc ttttctggca
     2341 agaaggctac ctgacagctt caatgaggca aaaacaatca cgttcagcat gctggttttc
     2401 ttcagtgtgt ggatttcttt tgtacccact tacttgagct ccaaaggcaa aaccatggtt
     2461 gctgtggaaa ttctttcaat tctggcttcc agtgctggct tactgggctg tatatttctt
     2521 cccaaatgct atgtgatcct aatgaagtca ggtgaccatt ctagaaagaa gttctttaaa
     2581 tga
//
